Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_G13
(758 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79597-2|CAB01860.2| 611|Caenorhabditis elegans Hypothetical pr... 40 0.001
AL132841-7|CAB61033.1| 611|Caenorhabditis elegans Hypothetical ... 40 0.001
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 33 0.29
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 33 0.29
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 33 0.29
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 30 2.1
U27312-10|AAA68253.1| 231|Caenorhabditis elegans Hypothetical p... 29 2.7
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 29 3.6
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z47068-3|CAD56568.1| 278|Caenorhabditis elegans Hypothetical pr... 29 4.7
U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain (pr... 29 4.7
U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain (pr... 29 4.7
U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain (pr... 29 4.7
U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain (pr... 29 4.7
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z72502-16|CAI46573.2| 409|Caenorhabditis elegans Hypothetical p... 28 6.3
Z70782-12|CAI46574.2| 409|Caenorhabditis elegans Hypothetical p... 28 6.3
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 28 6.3
U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein. 28 6.3
U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein. 28 6.3
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 28 6.3
AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell... 28 6.3
AC084159-10|AAK39362.1| 310|Caenorhabditis elegans Hypothetical... 28 6.3
Z47068-1|CAA87331.1| 279|Caenorhabditis elegans Hypothetical pr... 28 8.3
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 28 8.3
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 28 8.3
L25598-7|AAA27938.3| 436|Caenorhabditis elegans Hypothetical pr... 28 8.3
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 28 8.3
AF047659-6|AAC04424.1| 409|Caenorhabditis elegans Hypothetical ... 28 8.3
>Z79597-2|CAB01860.2| 611|Caenorhabditis elegans Hypothetical
protein C33A11.1 protein.
Length = 611
Score = 40.3 bits (90), Expect = 0.001
Identities = 35/121 (28%), Positives = 50/121 (41%), Gaps = 2/121 (1%)
Frame = +1
Query: 283 STDSSFAEQALADTSTLLDRDPNGEHLPSRLYKMAGEYWNKYPKTDYTYS-PLSKDRVEL 459
S S F++ + ADTS +L P LP L +Y N+Y K + P S D
Sbjct: 240 SLQSPFSDISSADTSRVLT--PENNELPESLQDFILQYSNQYTKEESIRGRPPSADSGVS 297
Query: 460 APGQVAMPNMSRRSLSQFRIQGPNTSPDEVDRLSATSAWTATTVRKRYTA-IDSSDDETG 636
+P + + Q GP T RLS ++ T ++R A I SD TG
Sbjct: 298 SPMSARSAPYASPHVPQGTCSGPTTPSFNQTRLSPRTSENGITAKQRLNAIIPESDLATG 357
Query: 637 Y 639
+
Sbjct: 358 F 358
>AL132841-7|CAB61033.1| 611|Caenorhabditis elegans Hypothetical
protein C33A11.1 protein.
Length = 611
Score = 40.3 bits (90), Expect = 0.001
Identities = 35/121 (28%), Positives = 50/121 (41%), Gaps = 2/121 (1%)
Frame = +1
Query: 283 STDSSFAEQALADTSTLLDRDPNGEHLPSRLYKMAGEYWNKYPKTDYTYS-PLSKDRVEL 459
S S F++ + ADTS +L P LP L +Y N+Y K + P S D
Sbjct: 240 SLQSPFSDISSADTSRVLT--PENNELPESLQDFILQYSNQYTKEESIRGRPPSADSGVS 297
Query: 460 APGQVAMPNMSRRSLSQFRIQGPNTSPDEVDRLSATSAWTATTVRKRYTA-IDSSDDETG 636
+P + + Q GP T RLS ++ T ++R A I SD TG
Sbjct: 298 SPMSARSAPYASPHVPQGTCSGPTTPSFNQTRLSPRTSENGITAKQRLNAIIPESDLATG 357
Query: 637 Y 639
+
Sbjct: 358 F 358
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = -3
Query: 690 SDPPSLVVCHH-GTL-VLNVAGFVVRAVDSG 604
SDPP ++VC+ TL V+N++G VVR + SG
Sbjct: 405 SDPPQMIVCNRSNTLYVVNISGQVVRTMTSG 435
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = -3
Query: 690 SDPPSLVVCHH-GTL-VLNVAGFVVRAVDSG 604
SDPP ++VC+ TL V+N++G VVR + SG
Sbjct: 405 SDPPQMIVCNRSNTLYVVNISGQVVRTMTSG 435
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/57 (38%), Positives = 26/57 (45%)
Frame = +2
Query: 503 SPSSAYRDRTPAPTRWTGCPLRARGQPPRSGNDIPLSTARTTKPATFKTRVPWWHTT 673
SPSS+ TP T T P +PP S + P+ T TT P T T P TT
Sbjct: 249 SPSSS---TTPVQTTTTTAPETTSTEPP-SSSTTPVQTTTTTAPETTSTEPPSSSTT 301
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/57 (38%), Positives = 26/57 (45%)
Frame = +2
Query: 503 SPSSAYRDRTPAPTRWTGCPLRARGQPPRSGNDIPLSTARTTKPATFKTRVPWWHTT 673
SPSS+ TP T T P +PP S + P+ T TT P T T P TT
Sbjct: 525 SPSSS---TTPVQTTTTTAPETTSTEPP-SSSTTPVQTTTTTAPETTSTEPPSSSTT 577
Score = 32.3 bits (70), Expect = 0.38
Identities = 21/57 (36%), Positives = 25/57 (43%)
Frame = +2
Query: 503 SPSSAYRDRTPAPTRWTGCPLRARGQPPRSGNDIPLSTARTTKPATFKTRVPWWHTT 673
+PSS+ TP T T P +PP S P+ T TT P T T P TT
Sbjct: 111 APSSS---TTPVQTTTTTAPETTSTEPPSSSTS-PVQTTTTTAPETTSTEAPSSSTT 163
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +2
Query: 530 TPAPTRWTGCPLRARGQPPRSGNDIPLSTARTTKPATFKTRVP 658
TP T T P +PP S N P+ T TT P T T P
Sbjct: 669 TPVQTTTTTAPETTSTEPPSSSN-TPVQTTTTTAPETTSTEPP 710
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +2
Query: 530 TPAPTRWTGCPLRARGQPPRSGNDIPLSTARTTKPATFKTRVP 658
TP T T P +PP S N P+ T TT P T T P
Sbjct: 761 TPVQTTTTTAPETTSTEPPSSSN-TPVQTTTTTAPETTSTEPP 802
Score = 31.5 bits (68), Expect = 0.67
Identities = 21/57 (36%), Positives = 25/57 (43%)
Frame = +2
Query: 503 SPSSAYRDRTPAPTRWTGCPLRARGQPPRSGNDIPLSTARTTKPATFKTRVPWWHTT 673
+PSS+ TP T T P +PP S P+ T TT P T T P TT
Sbjct: 157 APSSS---TTPVQTTTTTAPETTSTEPPSSSTS-PVQTTTTTAPETTSTEPPSSSTT 209
Score = 31.5 bits (68), Expect = 0.67
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +2
Query: 530 TPAPTRWTGCPLRARGQPPRSGNDIPLSTARTTKPATFKTRVPWWHTT 673
TP T T P R +PP S + P+ TT P T T P TT
Sbjct: 347 TPVQTTTTTAPETTRTEPP-SSSTTPVQNTTTTAPETTSTEPPSSSTT 393
Score = 31.5 bits (68), Expect = 0.67
Identities = 21/56 (37%), Positives = 24/56 (42%)
Frame = +2
Query: 506 PSSAYRDRTPAPTRWTGCPLRARGQPPRSGNDIPLSTARTTKPATFKTRVPWWHTT 673
PSS+ TP T T P +PP S P+ T TT P T T P TT
Sbjct: 687 PSSS---NTPVQTTTTTAPETTSTEPPSSSTS-PVQTTTTTAPETTSTEPPSSSTT 738
Score = 31.5 bits (68), Expect = 0.67
Identities = 21/56 (37%), Positives = 24/56 (42%)
Frame = +2
Query: 506 PSSAYRDRTPAPTRWTGCPLRARGQPPRSGNDIPLSTARTTKPATFKTRVPWWHTT 673
PSS+ TP T T P +PP S P+ T TT P T T P TT
Sbjct: 825 PSSS---NTPVQTTTTTAPETTSTEPPSSSTS-PVQTTTTTAPETTSTEPPSSSTT 876
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +2
Query: 470 RWPCRICPGGRSPSSAYRDRTPAPTRWTGCPLRARGQPPRS 592
R P R PG RSP R R P P R P R PP++
Sbjct: 120 RTPPRRSPGRRSPP---RSRLPGPERRDVMPFNPRHSPPKN 157
>U27312-10|AAA68253.1| 231|Caenorhabditis elegans Hypothetical
protein F26A1.12 protein.
Length = 231
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 6/52 (11%)
Frame = -2
Query: 514 GTGRATAGTYSAWPPVPERAPRGP------STKASTCSPFWGICSNTRRPSC 377
G GR + PP P R PR P +T A +C W + R P C
Sbjct: 37 GEGRGHHHKHGPRPPRPNRPPRPPPATPPPTTPAPSCPGGWSLIHRRRGPWC 88
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
protein W05B2.2 protein.
Length = 1278
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 631 TGYIQNKGAVVAHDERWW 684
TG ++ GAVV DERWW
Sbjct: 197 TGDTKDAGAVVVADERWW 214
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 5/61 (8%)
Frame = +2
Query: 491 PGGRSPSSAYRDRTPAPTRWTGCP-----LRARGQPPRSGNDIPLSTARTTKPATFKTRV 655
PGG P ++R P P G P + G+ PR G P S A P + +
Sbjct: 814 PGGPVPPGPPQNRMPPPPPAQGAPSPSGAAGSNGKQPRYGTPAPPSRASAPTPQPLSSTM 873
Query: 656 P 658
P
Sbjct: 874 P 874
>Z47068-3|CAD56568.1| 278|Caenorhabditis elegans Hypothetical
protein F15G9.1c protein.
Length = 278
Score = 28.7 bits (61), Expect = 4.7
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Frame = +1
Query: 226 YSASLDRSSRIGSPTYSVCSTDSSFAEQALADTSTLLDRDPNGEHLPS---RLYKMAGEY 396
Y++S SSR GS + S+ SS DT + DRD + S R A +Y
Sbjct: 5 YTSSYTPSSRYGSG-WDYSSSYSSSRTSRDRDTGSYRDRDYSSTSYTSTRPRYSTYASKY 63
Query: 397 WNKYPKT-----DYTYSPLSKDRVE 456
K+ DY+ +P++KD +E
Sbjct: 64 STDLGKSTDRMDDYSAAPIAKDEIE 88
>U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform b
protein.
Length = 849
Score = 28.7 bits (61), Expect = 4.7
Identities = 44/177 (24%), Positives = 67/177 (37%), Gaps = 5/177 (2%)
Frame = +1
Query: 133 NEINSQYERVSTSSQRYSTFADVTLSPVHAAYSASLDRSSRIGSPTYSVCSTDSSFAEQA 312
N+ +SQ VST S +++ PVH S S I +V S+AE
Sbjct: 219 NKNSSQTSPVSTVVSESSISSNLETRPVHPPLSPS--EVVEIAKEKKNV---SKSYAEHL 273
Query: 313 LADTS-TLLDRDPNGEHLPSRLYKMAGEYWNKYPKTDYTYSPLSKDRVELAPGQVAMP-- 483
T+ T P G + ++A + N+ P + K + AP MP
Sbjct: 274 SKSTAGTQKKGAPIGAEKKQK-QELAKKMSNQLPIESIATRIVVKGQPHSAPVVSRMPFS 332
Query: 484 --NMSRRSLSQFRIQGPNTSPDEVDRLSATSAWTATTVRKRYTAIDSSDDETGYIQN 648
+++ RS PN PDE+ R +SA K ++ ETG +N
Sbjct: 333 YRDVAARSDHTSSSNHPNHQPDELQRKELSSADLKLNDSKAVRTKNNDHRETGKTRN 389
>U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform d
protein.
Length = 868
Score = 28.7 bits (61), Expect = 4.7
Identities = 44/177 (24%), Positives = 67/177 (37%), Gaps = 5/177 (2%)
Frame = +1
Query: 133 NEINSQYERVSTSSQRYSTFADVTLSPVHAAYSASLDRSSRIGSPTYSVCSTDSSFAEQA 312
N+ +SQ VST S +++ PVH S S I +V S+AE
Sbjct: 219 NKNSSQTSPVSTVVSESSISSNLETRPVHPPLSPS--EVVEIAKEKKNV---SKSYAEHL 273
Query: 313 LADTS-TLLDRDPNGEHLPSRLYKMAGEYWNKYPKTDYTYSPLSKDRVELAPGQVAMP-- 483
T+ T P G + ++A + N+ P + K + AP MP
Sbjct: 274 SKSTAGTQKKGAPIGAEKKQK-QELAKKMSNQLPIESIATRIVVKGQPHSAPVVSRMPFS 332
Query: 484 --NMSRRSLSQFRIQGPNTSPDEVDRLSATSAWTATTVRKRYTAIDSSDDETGYIQN 648
+++ RS PN PDE+ R +SA K ++ ETG +N
Sbjct: 333 YRDVAARSDHTSSSNHPNHQPDELQRKELSSADLKLNDSKAVRTKNNDHRETGKTRN 389
>U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform a
protein.
Length = 915
Score = 28.7 bits (61), Expect = 4.7
Identities = 44/177 (24%), Positives = 67/177 (37%), Gaps = 5/177 (2%)
Frame = +1
Query: 133 NEINSQYERVSTSSQRYSTFADVTLSPVHAAYSASLDRSSRIGSPTYSVCSTDSSFAEQA 312
N+ +SQ VST S +++ PVH S S I +V S+AE
Sbjct: 219 NKNSSQTSPVSTVVSESSISSNLETRPVHPPLSPS--EVVEIAKEKKNV---SKSYAEHL 273
Query: 313 LADTS-TLLDRDPNGEHLPSRLYKMAGEYWNKYPKTDYTYSPLSKDRVELAPGQVAMP-- 483
T+ T P G + ++A + N+ P + K + AP MP
Sbjct: 274 SKSTAGTQKKGAPIGAEKKQK-QELAKKMSNQLPIESIATRIVVKGQPHSAPVVSRMPFS 332
Query: 484 --NMSRRSLSQFRIQGPNTSPDEVDRLSATSAWTATTVRKRYTAIDSSDDETGYIQN 648
+++ RS PN PDE+ R +SA K ++ ETG +N
Sbjct: 333 YRDVAARSDHTSSSNHPNHQPDELQRKELSSADLKLNDSKAVRTKNNDHRETGKTRN 389
>U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform c
protein.
Length = 912
Score = 28.7 bits (61), Expect = 4.7
Identities = 44/177 (24%), Positives = 67/177 (37%), Gaps = 5/177 (2%)
Frame = +1
Query: 133 NEINSQYERVSTSSQRYSTFADVTLSPVHAAYSASLDRSSRIGSPTYSVCSTDSSFAEQA 312
N+ +SQ VST S +++ PVH S S I +V S+AE
Sbjct: 218 NKNSSQTSPVSTVVSESSISSNLETRPVHPPLSPS--EVVEIAKEKKNV---SKSYAEHL 272
Query: 313 LADTS-TLLDRDPNGEHLPSRLYKMAGEYWNKYPKTDYTYSPLSKDRVELAPGQVAMP-- 483
T+ T P G + ++A + N+ P + K + AP MP
Sbjct: 273 SKSTAGTQKKGAPIGAEKKQK-QELAKKMSNQLPIESIATRIVVKGQPHSAPVVSRMPFS 331
Query: 484 --NMSRRSLSQFRIQGPNTSPDEVDRLSATSAWTATTVRKRYTAIDSSDDETGYIQN 648
+++ RS PN PDE+ R +SA K ++ ETG +N
Sbjct: 332 YRDVAARSDHTSSSNHPNHQPDELQRKELSSADLKLNDSKAVRTKNNDHRETGKTRN 388
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +2
Query: 476 PCRICPGGRSPSSAYRDRTPAPTRWTGCPLRARGQPPRSG 595
PC+ CPGGR P P G P G PR G
Sbjct: 148 PCKPCPGGR-PGPPGPPGRPGSDGQPGRPATGGGAAPRPG 186
>Z72502-16|CAI46573.2| 409|Caenorhabditis elegans Hypothetical
protein C08B6.14 protein.
Length = 409
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -1
Query: 587 VVAVHALVADSRSTSSGLVFGPCMRNWESDRRDIFGMATCPGASST 450
V V+ L + SSG+ F P W + R D +G A++T
Sbjct: 321 VAPVYFLTGSAGCHSSGMKFSPIPMPWSAHRSDDYGYTVMTVANTT 366
>Z70782-12|CAI46574.2| 409|Caenorhabditis elegans Hypothetical
protein C08B6.14 protein.
Length = 409
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -1
Query: 587 VVAVHALVADSRSTSSGLVFGPCMRNWESDRRDIFGMATCPGASST 450
V V+ L + SSG+ F P W + R D +G A++T
Sbjct: 321 VAPVYFLTGSAGCHSSGMKFSPIPMPWSAHRSDDYGYTVMTVANTT 366
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +1
Query: 73 ICLSEIILYTTIYKNVNVLLNEINSQYERVS-TSSQRYSTFADVTLSPVHAAYSASLDRS 249
I LSE IYK VN +N +Y+ V+ ++S +T T +P+ + +
Sbjct: 442 ISLSETNTLVVIYKGVNGARFSLNYRYDPVTFSTSAPTTTSTTTTTAPITVPTVSPTTTT 501
Query: 250 SRIGSPTYSVCSTDSSFAEQALADTST 330
+R + T +T ++ TST
Sbjct: 502 TRQTTTTARTSTTTTTTQAPPTTTTST 528
>U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 262 SPTYSVCSTDSSFAEQALADTSTLLD 339
SPT SVCS SS A A TS+ +D
Sbjct: 224 SPTDSVCSPSSSVASSATPSTSSPVD 249
>U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 262 SPTYSVCSTDSSFAEQALADTSTLLD 339
SPT SVCS SS A A TS+ +D
Sbjct: 224 SPTDSVCSPSSSVASSATPSTSSPVD 249
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +1
Query: 73 ICLSEIILYTTIYKNVNVLLNEINSQYERVS-TSSQRYSTFADVTLSPVHAAYSASLDRS 249
I LSE IYK VN +N +Y+ V+ ++S +T T +P+ + +
Sbjct: 442 ISLSETNTLVVIYKGVNGARFSLNYRYDPVTFSTSAPTTTSTTTTTAPITVPTVSPTTTT 501
Query: 250 SRIGSPTYSVCSTDSSFAEQALADTST 330
+R + T +T ++ TST
Sbjct: 502 TRQTTTTARTSTTTTTTQAPPTTTTST 528
>AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell
lineage protein 1 protein.
Length = 441
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 262 SPTYSVCSTDSSFAEQALADTSTLLD 339
SPT SVCS SS A A TS+ +D
Sbjct: 224 SPTDSVCSPSSSVASSATPSTSSPVD 249
>AC084159-10|AAK39362.1| 310|Caenorhabditis elegans Hypothetical
protein Y73B3A.5 protein.
Length = 310
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 262 SPTYSVCSTDSSFAEQALADTSTLLD 339
SPT SVCS SS A A TS+ +D
Sbjct: 129 SPTDSVCSPSSSVASSATPSTSSPVD 154
>Z47068-1|CAA87331.1| 279|Caenorhabditis elegans Hypothetical
protein F15G9.1a protein.
Length = 279
Score = 27.9 bits (59), Expect = 8.3
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Frame = +1
Query: 226 YSASLDRSSRIGSPTYSVCSTDSSFAEQALADTSTLLDRDPNGEHLPS---RLYKMAGEY 396
Y++S SSR GS + S+ SS DT + DRD + S R A +Y
Sbjct: 5 YTSSYTPSSRYGSG-WDYSSSYSSSRTSRDRDTGSYRDRDYSSTSYTSTRPRYSTYASKY 63
Query: 397 WNKYPKT------DYTYSPLSKDRVE 456
K+ DY+ +P++KD +E
Sbjct: 64 STDLGKSTDKGMDDYSAAPIAKDEIE 89
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 226 YSASLDRSSRIGSPTYSVCSTDSSFAEQALADTSTLLDRD 345
++ DRS RI PTYS+C A+Q + S + D +
Sbjct: 2160 WATKSDRSRRIWEPTYSICYCS---ADQTNVEVSKIPDEE 2196
>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform a protein.
Length = 2886
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +1
Query: 166 TSSQRYSTFADVTLSPVHAAYSASLDRSSRIGSPTYSVCSTDSSFAEQALADTSTLLDRD 345
TS+ +ST V+ + S+ L SS PT S+CS S + ++ T L
Sbjct: 710 TSNSTHSTHISVSFPNTVTSASSILSNSSSPHQPTPSLCSLPESSSLHSIPTAMTSLSTT 769
Query: 346 PNGEH 360
H
Sbjct: 770 TTPTH 774
>L25598-7|AAA27938.3| 436|Caenorhabditis elegans Hypothetical
protein C06G4.5 protein.
Length = 436
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 187 YCTAANLLTPVHIDY*SRSREHLHSYRSSYIVLFHLN 77
YCT L+ + S+ REH +++SS I H++
Sbjct: 241 YCTPLVLIAFFYTKLLSKLREHTRTFKSSQIPFLHIS 277
>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
Length = 2914
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +1
Query: 166 TSSQRYSTFADVTLSPVHAAYSASLDRSSRIGSPTYSVCSTDSSFAEQALADTSTLLDRD 345
TS+ +ST V+ + S+ L SS PT S+CS S + ++ T L
Sbjct: 710 TSNSTHSTHISVSFPNTVTSASSILSNSSSPHQPTPSLCSLPESSSLHSIPTAMTSLSTT 769
Query: 346 PNGEH 360
H
Sbjct: 770 TTPTH 774
>AF047659-6|AAC04424.1| 409|Caenorhabditis elegans Hypothetical
protein K07H8.5 protein.
Length = 409
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 577 TATTVRKRYTAIDSSDDETGYIQNKGAVVAHDERWWITXLFVSIISGIASGT 732
T T RY I++ D +TG + + +WW LFV I G GT
Sbjct: 247 TTTVPPVRY--INNPDYQTGSNEEENPNTYTPGKWWAWGLFVGFIIGSLLGT 296
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,746,541
Number of Sequences: 27780
Number of extensions: 387249
Number of successful extensions: 1534
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1529
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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