Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_G13
         (758 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              26   0.33 
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    26   0.44 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   1.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   1.8  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    22   7.2  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   9.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   9.5  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   9.5  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 20/64 (31%), Positives = 25/64 (39%)
 Frame = +3

Query: 399  EQIPQNGLHVLAFVEGPRGARSGTGGHAEYVPAVALPVPHTGTEHQPRRGGPAVRYERVD 578
            E  P   +    F   P    SGT G     P  A     +G++  PR+ G   RY RV 
Sbjct: 1736 EMDPSKAMQFQTFPH-PGNGHSGTMGPPVGHPTNASAHSRSGSQSMPRQNG---RYSRVP 1791

Query: 579  SHHG 590
            S  G
Sbjct: 1792 SQGG 1795


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 163 STSSQRYSTFADVTLSPVHAAYSA 234
           +T  Q  + F  VT  PVH+AY A
Sbjct: 277 TTEQQHKAMFLVVTAQPVHSAYKA 300


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +2

Query: 482 RICPGGRSPSSAYRDRTPAPTRWTGCPLRARGQPPRSGNDIPLSTA 619
           ++  G +S        T + T++TGC L +   P +S     + T+
Sbjct: 774 KVTMGDKSKKQGSSAGTSSITKYTGCELTSESMPLQSALTAAVQTS 819


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 933

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +2

Query: 482  RICPGGRSPSSAYRDRTPAPTRWTGCPLRARGQPPRSGNDIPLSTA 619
            ++  G +S        T + T++TGC L +   P +S     + T+
Sbjct: 864  KVTMGDKSKKQGSSAGTSSITKYTGCELTSESMPLQSALTAAVQTS 909


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
 Frame = +1

Query: 430 SPLSKDRVELAPGQVA--MPNMSRRSLS-----QFRIQGPNTSPDEVDRLSA 564
           S L K  + LA  Q    + N+ +R+LS     Q R  GP+ S  E  R+S+
Sbjct: 101 SRLDKSEISLATKQACGFIDNIDKRNLSVTSMIQKRALGPSFSTGERCRISS 152


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = +2

Query: 470 RWPCRICPGGRSPSSAYRDRTPAPTRW 550
           R  CR C   R+       + PAP  W
Sbjct: 372 RLTCRKCFKSRTNLDPSNRKLPAPANW 398


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 382 SCKVWTANARRWDPGLAEC*C 320
           SC+   A+++  D G  EC C
Sbjct: 278 SCEACPAHSKSSDYGFTECRC 298


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 564 YERVDSHHGQETIYRYRQLG 623
           YE+ DS  GQ  +Y+   +G
Sbjct: 520 YEQFDSFCGQLDVYKVETIG 539


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,339
Number of Sequences: 438
Number of extensions: 4729
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)