Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_G12
         (814 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC013630-1|AAH13630.1|  320|Homo sapiens JTV1 gene protein.            50   1e-05
U24169-1|AAC50391.1|  312|Homo sapiens JTV-1 protein.                  50   1e-05
BC010156-1|AAH10156.1|  320|Homo sapiens JTV1 gene protein.            50   1e-05
BC002853-1|AAH02853.1|  320|Homo sapiens JTV1 gene protein.            50   1e-05
AC005995-2|AAS00389.1|  320|Homo sapiens unknown protein.              50   1e-05

>BC013630-1|AAH13630.1|  320|Homo sapiens JTV1 gene protein.
          Length = 320

 Score = 50.0 bits (114), Expect = 1e-05
 Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
 Frame = +2

Query: 242 EEVVLVLSPDSLPWYLNII--LKKSNIPIHTTCHVHSSVPS--EKLAKIKAFTQKLKTSE 409
           +++V+  +P S P  L ++  L   +  + +T H HSSV S  E L K      K +  +
Sbjct: 120 KDIVINANPGSPPLSLLVLHRLLCEHFRVLSTVHTHSSVKSVPENLLKCFGEQNKKQPRQ 179

Query: 410 NPKVNLRLIFKAAADSELKLSALS-TPILGNVNILRYLSLAYPTIIPYDH---NDHIVDN 577
           + ++   LI+K    +++K S  +  PI G  NI R+L     ++    H   N  ++D+
Sbjct: 180 DYQLGFTLIWKNVPKTQMKFSIQTMCPIEGEGNIARFLF----SLFGQKHNAVNATLIDS 235

Query: 578 LLDIC-HVLERTSEKNKEAVVNRLFAHY--KTWVYGDKFSVVDLAAYNLIKQWR----NT 736
            +DI    L+  S K K AV   + +      W+ G++ +V D+  +++++Q        
Sbjct: 236 WVDIAIFQLKEGSSKEKAAVFRSMNSALGKSPWLAGNELTVADVVLWSVLQQIGGCSVTV 295

Query: 737 PKFVSKVWFDKCEKL 781
           P  V + W   CE L
Sbjct: 296 PANVQR-WMRSCENL 309


>U24169-1|AAC50391.1|  312|Homo sapiens JTV-1 protein.
          Length = 312

 Score = 49.6 bits (113), Expect = 1e-05
 Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
 Frame = +2

Query: 242 EEVVLVLSPDSLPWYLNII--LKKSNIPIHTTCHVHSSVPS--EKLAKIKAFTQKLKTSE 409
           +++V+  +P S P  L ++  L   +  + +T H HSSV S  E L K      K +  +
Sbjct: 120 KDIVINANPASPPLSLLVLHRLLCEHFRVLSTVHTHSSVKSVPENLLKCFGEQNKKQPRQ 179

Query: 410 NPKVNLRLIFKAAADSELKLSALS-TPILGNVNILRYLSLAYPTIIPYDH---NDHIVDN 577
           + ++   LI+K    +++K S  +  PI G  NI R+L     ++    H   N  ++D+
Sbjct: 180 DYQLGFTLIWKNVPKTQMKFSIQTMCPIEGEGNIARFLF----SLFGQKHNAVNATLIDS 235

Query: 578 LLDIC-HVLERTSEKNKEAVVNRLFAHY--KTWVYGDKFSVVDLAAYNLIKQWR----NT 736
            +DI    L+  S K K AV   + +      W+ G++ +V D+  +++++Q        
Sbjct: 236 WVDIAIFQLKEGSSKEKAAVFRSMNSALGKSPWLAGNELTVADVVLWSVLQQIGGCSVTV 295

Query: 737 PKFVSKVWFDKCEKL 781
           P  V + W   CE L
Sbjct: 296 PANVQR-WMRSCENL 309


>BC010156-1|AAH10156.1|  320|Homo sapiens JTV1 gene protein.
          Length = 320

 Score = 49.6 bits (113), Expect = 1e-05
 Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
 Frame = +2

Query: 242 EEVVLVLSPDSLPWYLNII--LKKSNIPIHTTCHVHSSVPS--EKLAKIKAFTQKLKTSE 409
           +++V+  +P S P  L ++  L   +  + +T H HSSV S  E L K      K +  +
Sbjct: 120 KDIVINANPASPPLSLLVLHRLLCEHFRVLSTVHTHSSVKSVPENLLKCFGEQNKKQPRQ 179

Query: 410 NPKVNLRLIFKAAADSELKLSALS-TPILGNVNILRYLSLAYPTIIPYDH---NDHIVDN 577
           + ++   LI+K    +++K S  +  PI G  NI R+L     ++    H   N  ++D+
Sbjct: 180 DYQLGFTLIWKNVPKTQMKFSIQTMCPIEGEGNIARFLF----SLFGQKHNAVNATLIDS 235

Query: 578 LLDIC-HVLERTSEKNKEAVVNRLFAHY--KTWVYGDKFSVVDLAAYNLIKQWR----NT 736
            +DI    L+  S K K AV   + +      W+ G++ +V D+  +++++Q        
Sbjct: 236 WVDIAIFQLKEGSSKEKAAVFRSMNSALGKSPWLAGNELTVADVVLWSVLQQIGGCSVTV 295

Query: 737 PKFVSKVWFDKCEKL 781
           P  V + W   CE L
Sbjct: 296 PANVQR-WMRSCENL 309


>BC002853-1|AAH02853.1|  320|Homo sapiens JTV1 gene protein.
          Length = 320

 Score = 49.6 bits (113), Expect = 1e-05
 Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
 Frame = +2

Query: 242 EEVVLVLSPDSLPWYLNII--LKKSNIPIHTTCHVHSSVPS--EKLAKIKAFTQKLKTSE 409
           +++V+  +P S P  L ++  L   +  + +T H HSSV S  E L K      K +  +
Sbjct: 120 KDIVINANPASPPLSLLVLHRLLCEHFRVLSTVHTHSSVKSVPENLLKCFGEQNKKQPRQ 179

Query: 410 NPKVNLRLIFKAAADSELKLSALS-TPILGNVNILRYLSLAYPTIIPYDH---NDHIVDN 577
           + ++   LI+K    +++K S  +  PI G  NI R+L     ++    H   N  ++D+
Sbjct: 180 DYQLGFTLIWKNVPKTQMKFSIQTMCPIEGEGNIARFLF----SLFGQKHNAVNATLIDS 235

Query: 578 LLDIC-HVLERTSEKNKEAVVNRLFAHY--KTWVYGDKFSVVDLAAYNLIKQWR----NT 736
            +DI    L+  S K K AV   + +      W+ G++ +V D+  +++++Q        
Sbjct: 236 WVDIAIFQLKEGSSKEKAAVFRSMNSALGKSPWLAGNELTVADVVLWSVLQQIGGCSVTV 295

Query: 737 PKFVSKVWFDKCEKL 781
           P  V + W   CE L
Sbjct: 296 PANVQR-WMRSCENL 309


>AC005995-2|AAS00389.1|  320|Homo sapiens unknown protein.
          Length = 320

 Score = 49.6 bits (113), Expect = 1e-05
 Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
 Frame = +2

Query: 242 EEVVLVLSPDSLPWYLNII--LKKSNIPIHTTCHVHSSVPS--EKLAKIKAFTQKLKTSE 409
           +++V+  +P S P  L ++  L   +  + +T H HSSV S  E L K      K +  +
Sbjct: 120 KDIVINANPASPPLSLLVLHRLLCEHFRVLSTVHTHSSVKSVPENLLKCFGEQNKKQPRQ 179

Query: 410 NPKVNLRLIFKAAADSELKLSALS-TPILGNVNILRYLSLAYPTIIPYDH---NDHIVDN 577
           + ++   LI+K    +++K S  +  PI G  NI R+L     ++    H   N  ++D+
Sbjct: 180 DYQLGFTLIWKNVPKTQMKFSIQTMCPIEGEGNIARFLF----SLFGQKHNAVNATLIDS 235

Query: 578 LLDIC-HVLERTSEKNKEAVVNRLFAHY--KTWVYGDKFSVVDLAAYNLIKQWR----NT 736
            +DI    L+  S K K AV   + +      W+ G++ +V D+  +++++Q        
Sbjct: 236 WVDIAIFQLKEGSSKEKAAVFRSMNSALGKSPWLAGNELTVADVVLWSVLQQIGGCSVTV 295

Query: 737 PKFVSKVWFDKCEKL 781
           P  V + W   CE L
Sbjct: 296 PANVQR-WMRSCENL 309


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,834,211
Number of Sequences: 237096
Number of extensions: 1988715
Number of successful extensions: 3806
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3806
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)