Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_G12
         (814 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012670-1|AAT08476.1|  322|Drosophila melanogaster LP12114p pro...    50   4e-06
AY069537-1|AAL39682.3|  301|Drosophila melanogaster LD25772p pro...    50   4e-06
AE014296-2541|AAS64998.1|  301|Drosophila melanogaster CG12304-P...    50   4e-06
AE014296-2540|AAF49612.1|  334|Drosophila melanogaster CG12304-P...    50   4e-06
BT001270-1|AAN71026.1|  623|Drosophila melanogaster AT04551p pro...    30   4.3  
AY094883-1|AAM11236.1|  443|Drosophila melanogaster RE51913p pro...    29   5.7  
AE014135-28|AAN06558.1|  443|Drosophila melanogaster CG32006-PA ...    29   5.7  

>BT012670-1|AAT08476.1|  322|Drosophila melanogaster LP12114p
           protein.
          Length = 322

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
 Frame = +2

Query: 413 PKVNLRLIFKAAADSELKLS-ALSTPILGNVNILRYLSLAYPTIIPYDHND--HIVDNLL 583
           PK+++ LI+K    +E+  S  +  PI G VNI+RYL    P    Y+ +   + +D +L
Sbjct: 187 PKISVTLIWKNCEHTEMISSPTMYVPIYGEVNIIRYLGRVGPAEYRYEGSPLCNEIDLVL 246

Query: 584 DICHVLER-TSEKNKEAVVNRLFAHYKTWVY--GDKFSVVDLAAYN 712
           DIC+ L R  + K + A+V  L    +   Y  G + SV D+  Y+
Sbjct: 247 DICYQLLRCNTHKTQVAMVRLLDKRLQKQQYFGGSQMSVADVGVYS 292


>AY069537-1|AAL39682.3|  301|Drosophila melanogaster LD25772p
           protein.
          Length = 301

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
 Frame = +2

Query: 413 PKVNLRLIFKAAADSELKLS-ALSTPILGNVNILRYLSLAYPTIIPYDHND--HIVDNLL 583
           PK+++ LI+K    +E+  S  +  PI G VNI+RYL    P    Y+ +   + +D +L
Sbjct: 166 PKISVTLIWKNCEHTEMISSPTMYVPIYGEVNIIRYLGRVGPAEYRYEGSPLCNEIDLVL 225

Query: 584 DICHVLER-TSEKNKEAVVNRLFAHYKTWVY--GDKFSVVDLAAYN 712
           DIC+ L R  + K + A+V  L    +   Y  G + SV D+  Y+
Sbjct: 226 DICYQLLRCNTHKTQVAMVRLLDKRLQKQQYFGGSQMSVADVGVYS 271


>AE014296-2541|AAS64998.1|  301|Drosophila melanogaster CG12304-PB,
           isoform B protein.
          Length = 301

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
 Frame = +2

Query: 413 PKVNLRLIFKAAADSELKLS-ALSTPILGNVNILRYLSLAYPTIIPYDHND--HIVDNLL 583
           PK+++ LI+K    +E+  S  +  PI G VNI+RYL    P    Y+ +   + +D +L
Sbjct: 166 PKISVTLIWKNCEHTEMISSPTMYVPIYGEVNIIRYLGRVGPAEYRYEGSPLCNEIDLVL 225

Query: 584 DICHVLER-TSEKNKEAVVNRLFAHYKTWVY--GDKFSVVDLAAYN 712
           DIC+ L R  + K + A+V  L    +   Y  G + SV D+  Y+
Sbjct: 226 DICYQLLRCNTHKTQVAMVRLLDKRLQKQQYFGGSQMSVADVGVYS 271


>AE014296-2540|AAF49612.1|  334|Drosophila melanogaster CG12304-PA,
           isoform A protein.
          Length = 334

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
 Frame = +2

Query: 413 PKVNLRLIFKAAADSELKLS-ALSTPILGNVNILRYLSLAYPTIIPYDHND--HIVDNLL 583
           PK+++ LI+K    +E+  S  +  PI G VNI+RYL    P    Y+ +   + +D +L
Sbjct: 199 PKISVTLIWKNCEHTEMISSPTMYVPIYGEVNIIRYLGRVGPAEYRYEGSPLCNEIDLVL 258

Query: 584 DICHVLER-TSEKNKEAVVNRLFAHYKTWVY--GDKFSVVDLAAYN 712
           DIC+ L R  + K + A+V  L    +   Y  G + SV D+  Y+
Sbjct: 259 DICYQLLRCNTHKTQVAMVRLLDKRLQKQQYFGGSQMSVADVGVYS 304


>BT001270-1|AAN71026.1|  623|Drosophila melanogaster AT04551p
           protein.
          Length = 623

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
 Frame = +2

Query: 263 SPDSLPWYLNIILKKSNIPIHTTCHVHSSVPSEKLAKIKAFTQKLKTSENPKVNLRLIFK 442
           +P  + W LN    +  +P        S VP       +  TQ    S++P+  LRL+  
Sbjct: 462 TPPPIDWELNTAPGQVQVPEPVAAPTPSFVPGSVTQPKEDSTQD-NDSDDPE-ELRLLLL 519

Query: 443 AAADSELKLSALSTPILGNVNILRY-LSLAYPTIIPY-DHNDHIVDNLLDICHVLERTSE 616
           ++  ++ + +  +        IL+  L    P+ +P  D    +   +LD C+VL+   E
Sbjct: 520 SSIATKKRTNGPNPKSGLRPEILKNALKRFQPSELPIKDERSQVQHPILDECNVLKTEKE 579

Query: 617 KNKEAVV 637
             KE  V
Sbjct: 580 IEKETAV 586


>AY094883-1|AAM11236.1|  443|Drosophila melanogaster RE51913p
           protein.
          Length = 443

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +2

Query: 548 YDHNDHIVDNLLDIC 592
           YD ND I++NLLD+C
Sbjct: 425 YDRNDDILENLLDVC 439


>AE014135-28|AAN06558.1|  443|Drosophila melanogaster CG32006-PA
           protein.
          Length = 443

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +2

Query: 548 YDHNDHIVDNLLDIC 592
           YD ND I++NLLD+C
Sbjct: 425 YDRNDDILENLLDVC 439


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,079,458
Number of Sequences: 53049
Number of extensions: 592695
Number of successful extensions: 1347
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1347
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)