Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_G12
(814 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92849-14|CAE17857.1| 359|Caenorhabditis elegans Hypothetical p... 29 5.2
Z78414-4|CAE17982.1| 359|Caenorhabditis elegans Hypothetical pr... 29 5.2
U64599-11|ABD94099.1| 324|Caenorhabditis elegans Regulator of g... 29 5.2
U64599-10|AAL11463.1| 424|Caenorhabditis elegans Regulator of g... 29 5.2
U64599-9|AAL65791.1| 782|Caenorhabditis elegans Regulator of g ... 29 5.2
U64599-7|AAL11462.1| 819|Caenorhabditis elegans Regulator of g ... 29 5.2
AY569308-1|AAS75452.1| 819|Caenorhabditis elegans RGS-7A protein. 29 5.2
AB080201-1|BAB85494.1| 782|Caenorhabditis elegans C2-RGS protei... 29 5.2
L12018-11|AAA65467.1| 348|Caenorhabditis elegans Hypothetical p... 28 6.9
Z81533-8|CAB04332.1| 917|Caenorhabditis elegans Hypothetical pr... 28 9.1
>Z92849-14|CAE17857.1| 359|Caenorhabditis elegans Hypothetical
protein H12D21.11 protein.
Length = 359
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 641 YLQLLLYFFLMSSPKRGKCLIDYQLCDHY 555
Y+ LLY FL+SS + +CL QLC +
Sbjct: 194 YISNLLYNFLISSVIQDRCLYIIQLCSTF 222
>Z78414-4|CAE17982.1| 359|Caenorhabditis elegans Hypothetical
protein H12D21.11 protein.
Length = 359
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 641 YLQLLLYFFLMSSPKRGKCLIDYQLCDHY 555
Y+ LLY FL+SS + +CL QLC +
Sbjct: 194 YISNLLYNFLISSVIQDRCLYIIQLCSTF 222
>U64599-11|ABD94099.1| 324|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform e protein.
Length = 324
Score = 28.7 bits (61), Expect = 5.2
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Frame = +2
Query: 260 LSPDSLPWYLNIILKKSNIPIHTTCHVHSSVPSEKLAKIKAFTQKLKTSENPKVNLRLIF 439
LSP+ P + + N ++ HS++ + + +FT K S + K NLR +
Sbjct: 81 LSPEQSPTDHHFLCPDDNGGVYGAGPAHSAIKKSSVRRAASFTFSPKHSSS-KTNLRQLN 139
Query: 440 KAAADSELKLSALSTPILGNVNILR-YLSLAYPTIIPYDHNDHI 568
D E K PI ++ LR + LA T Y D +
Sbjct: 140 GREEDKEKK--RFLGPISRTLSYLRSKMDLALSTSSLYPSRDDV 181
>U64599-10|AAL11463.1| 424|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform c protein.
Length = 424
Score = 28.7 bits (61), Expect = 5.2
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Frame = +2
Query: 260 LSPDSLPWYLNIILKKSNIPIHTTCHVHSSVPSEKLAKIKAFTQKLKTSENPKVNLRLIF 439
LSP+ P + + N ++ HS++ + + +FT K S + K NLR +
Sbjct: 181 LSPEQSPTDHHFLCPDDNGGVYGAGPAHSAIKKSSVRRAASFTFSPKHSSS-KTNLRQLN 239
Query: 440 KAAADSELKLSALSTPILGNVNILR-YLSLAYPTIIPYDHNDHI 568
D E K PI ++ LR + LA T Y D +
Sbjct: 240 GREEDKEKK--RFLGPISRTLSYLRSKMDLALSTSSLYPSRDDV 281
>U64599-9|AAL65791.1| 782|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform b protein.
Length = 782
Score = 28.7 bits (61), Expect = 5.2
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Frame = +2
Query: 260 LSPDSLPWYLNIILKKSNIPIHTTCHVHSSVPSEKLAKIKAFTQKLKTSENPKVNLRLIF 439
LSP+ P + + N ++ HS++ + + +FT K S + K NLR +
Sbjct: 539 LSPEQSPTDHHFLCPDDNGGVYGAGPAHSAIKKSSVRRAASFTFSPKHSSS-KTNLRQLN 597
Query: 440 KAAADSELKLSALSTPILGNVNILR-YLSLAYPTIIPYDHNDHI 568
D E K PI ++ LR + LA T Y D +
Sbjct: 598 GREEDKEKK--RFLGPISRTLSYLRSKMDLALSTSSLYPSRDDV 639
>U64599-7|AAL11462.1| 819|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform a protein.
Length = 819
Score = 28.7 bits (61), Expect = 5.2
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Frame = +2
Query: 260 LSPDSLPWYLNIILKKSNIPIHTTCHVHSSVPSEKLAKIKAFTQKLKTSENPKVNLRLIF 439
LSP+ P + + N ++ HS++ + + +FT K S + K NLR +
Sbjct: 576 LSPEQSPTDHHFLCPDDNGGVYGAGPAHSAIKKSSVRRAASFTFSPKHSSS-KTNLRQLN 634
Query: 440 KAAADSELKLSALSTPILGNVNILR-YLSLAYPTIIPYDHNDHI 568
D E K PI ++ LR + LA T Y D +
Sbjct: 635 GREEDKEKK--RFLGPISRTLSYLRSKMDLALSTSSLYPSRDDV 676
>AY569308-1|AAS75452.1| 819|Caenorhabditis elegans RGS-7A protein.
Length = 819
Score = 28.7 bits (61), Expect = 5.2
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Frame = +2
Query: 260 LSPDSLPWYLNIILKKSNIPIHTTCHVHSSVPSEKLAKIKAFTQKLKTSENPKVNLRLIF 439
LSP+ P + + N ++ HS++ + + +FT K S + K NLR +
Sbjct: 576 LSPEQSPTDHHFLCPDDNGGVYGAGPAHSAIKKSSVRRAASFTFSPKHSSS-KTNLRQLN 634
Query: 440 KAAADSELKLSALSTPILGNVNILR-YLSLAYPTIIPYDHNDHI 568
D E K PI ++ LR + LA T Y D +
Sbjct: 635 GREEDKEKK--RFLGPISRTLSYLRSKMDLALSTSSLYPSRDDV 676
>AB080201-1|BAB85494.1| 782|Caenorhabditis elegans C2-RGS protein
protein.
Length = 782
Score = 28.7 bits (61), Expect = 5.2
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Frame = +2
Query: 260 LSPDSLPWYLNIILKKSNIPIHTTCHVHSSVPSEKLAKIKAFTQKLKTSENPKVNLRLIF 439
LSP+ P + + N ++ HS++ + + +FT K S + K NLR +
Sbjct: 539 LSPEQSPTDHHFLCPDDNGGVYGAGPAHSAIKKSSVRRAASFTFSPKHSSS-KTNLRQLN 597
Query: 440 KAAADSELKLSALSTPILGNVNILR-YLSLAYPTIIPYDHNDHI 568
D E K PI ++ LR + LA T Y D +
Sbjct: 598 GREEDKEKK--RFLGPISRTLSYLRSKMDLALSTSSLYPSRDDV 639
>L12018-11|AAA65467.1| 348|Caenorhabditis elegans Hypothetical
protein F22B7.1 protein.
Length = 348
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 578 LLDICHVLERTSEKNKEAVVNRLFAHYKTWVYGDK 682
L+D + +++SE K ++ RL+ + W+YG K
Sbjct: 173 LIDQMAIQQKSSETEKMSIWARLWENLSVWMYGKK 207
>Z81533-8|CAB04332.1| 917|Caenorhabditis elegans Hypothetical
protein F36G9.13 protein.
Length = 917
Score = 27.9 bits (59), Expect = 9.1
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = +2
Query: 164 SQCKLDNMXANIQSSNASKVESVITPEEVVLVLSPDSLPWYLNIILKKSNIPIHTTCHVH 343
++ +D ++ S+ E + E+ ++ + + W I SNIP +T
Sbjct: 103 NKASVDKFVESLNSAAIDSNEDTLKVEQAMINIHEVKMAW--KKIGSLSNIPAKSTLDPL 160
Query: 344 SSVPSEKLAKIKAF----TQKLKTSENPKV 421
S++ S L+ +K+F T L SE+P V
Sbjct: 161 STIASWDLSVLKSFDLISTLHLIDSESPSV 190
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,353,548
Number of Sequences: 27780
Number of extensions: 325222
Number of successful extensions: 877
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -