Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_G11
         (381 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   2.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   2.1  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    21   4.9  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   6.5  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 252 NHLERWREIFFFLTNVISCRG 190
           NH+ RW   F     VISC G
Sbjct: 507 NHI-RWNSAFAIAPAVISCLG 526


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 252 NHLERWREIFFFLTNVISCRG 190
           NH+ RW   F     VISC G
Sbjct: 597 NHI-RWNSAFAIAPAVISCLG 616


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 48  GLERPETRPREPFGRP 1
           G   PE   +EP+G+P
Sbjct: 77  GYLSPEVLKKEPYGKP 92


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 253 KSFGEMARNLLFFN 212
           KSF  +  NLLFFN
Sbjct: 142 KSFSLLNFNLLFFN 155


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,823
Number of Sequences: 438
Number of extensions: 740
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9300375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)