Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_G10
(768 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002849-1|AAH02849.1| 177|Homo sapiens coatomer protein comple... 243 6e-64
AF151878-1|AAD34115.1| 177|Homo sapiens CGI-120 protein protein. 243 6e-64
AF086911-1|AAP97141.1| 177|Homo sapiens z-cop protein. 243 6e-64
AB047848-1|BAB17659.1| 177|Homo sapiens zeta1-COP protein. 243 6e-64
AK223188-1|BAD96908.1| 177|Homo sapiens coatomer protein comple... 241 3e-63
BC015924-1|AAH15924.1| 210|Homo sapiens coatomer protein comple... 212 1e-54
AB047849-1|BAB17660.1| 210|Homo sapiens zeta2-COP protein. 212 1e-54
AB037938-1|BAA90670.1| 210|Homo sapiens nonclathrin coat protei... 212 1e-54
CR457100-1|CAG33381.1| 144|Homo sapiens AP4S1 protein. 39 0.017
AF155159-1|AAD43329.1| 144|Homo sapiens adaptor-related protein... 39 0.017
AB030654-1|BAA82970.1| 144|Homo sapiens AP-4 clathrin adaptor-r... 39 0.017
AF393369-1|AAL09586.1| 154|Homo sapiens sigma 1C adaptin protein. 31 6.0
AK090465-1|BAC03446.1| 811|Homo sapiens FLJ00386 protein protein. 30 7.9
>BC002849-1|AAH02849.1| 177|Homo sapiens coatomer protein complex,
subunit zeta 1 protein.
Length = 177
Score = 243 bits (594), Expect = 6e-64
Identities = 111/177 (62%), Positives = 148/177 (83%)
Frame = +2
Query: 158 EGSLFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEII 337
E + EP+LY VK + ILD +G+R+ AKYYD D P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 2 EALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEIA 60
Query: 338 MLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDA 517
+L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+S +LR+N+E+R L+EN++
Sbjct: 61 LLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEG 120
Query: 518 VMLAFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAQVLQSAREQLKWSLLK 688
+ LA DEI DGGVIL++DP +V R ALR EDVPL EQTV+QVLQSA+EQ+KWSLL+
Sbjct: 121 LFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLLR 177
>AF151878-1|AAD34115.1| 177|Homo sapiens CGI-120 protein protein.
Length = 177
Score = 243 bits (594), Expect = 6e-64
Identities = 111/177 (62%), Positives = 148/177 (83%)
Frame = +2
Query: 158 EGSLFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEII 337
E + EP+LY VK + ILD +G+R+ AKYYD D P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 2 EALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEIA 60
Query: 338 MLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDA 517
+L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+S +LR+N+E+R L+EN++
Sbjct: 61 LLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEG 120
Query: 518 VMLAFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAQVLQSAREQLKWSLLK 688
+ LA DEI DGGVIL++DP +V R ALR EDVPL EQTV+QVLQSA+EQ+KWSLL+
Sbjct: 121 LFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLLR 177
>AF086911-1|AAP97141.1| 177|Homo sapiens z-cop protein.
Length = 177
Score = 243 bits (594), Expect = 6e-64
Identities = 111/177 (62%), Positives = 148/177 (83%)
Frame = +2
Query: 158 EGSLFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEII 337
E + EP+LY VK + ILD +G+R+ AKYYD D P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 2 EALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEIA 60
Query: 338 MLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDA 517
+L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+S +LR+N+E+R L+EN++
Sbjct: 61 LLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEG 120
Query: 518 VMLAFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAQVLQSAREQLKWSLLK 688
+ LA DEI DGGVIL++DP +V R ALR EDVPL EQTV+QVLQSA+EQ+KWSLL+
Sbjct: 121 LFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLLR 177
>AB047848-1|BAB17659.1| 177|Homo sapiens zeta1-COP protein.
Length = 177
Score = 243 bits (594), Expect = 6e-64
Identities = 111/177 (62%), Positives = 148/177 (83%)
Frame = +2
Query: 158 EGSLFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEII 337
E + EP+LY VK + ILD +G+R+ AKYYD D P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 2 EALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEIA 60
Query: 338 MLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDA 517
+L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+S +LR+N+E+R L+EN++
Sbjct: 61 LLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEG 120
Query: 518 VMLAFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAQVLQSAREQLKWSLLK 688
+ LA DEI DGGVIL++DP +V R ALR EDVPL EQTV+QVLQSA+EQ+KWSLL+
Sbjct: 121 LFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLLR 177
>AK223188-1|BAD96908.1| 177|Homo sapiens coatomer protein complex,
subunit zeta 1 variant protein.
Length = 177
Score = 241 bits (589), Expect = 3e-63
Identities = 110/177 (62%), Positives = 147/177 (83%)
Frame = +2
Query: 158 EGSLFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEII 337
E + EP+LY VK + ILD +G+R+ AKYYD D P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 2 EALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEIA 60
Query: 338 MLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDA 517
+L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+ +LR+N+E+R L+EN++
Sbjct: 61 LLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLRQMLRKNVEKRALLENMEG 120
Query: 518 VMLAFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAQVLQSAREQLKWSLLK 688
+ LA DEI DGGVIL++DP +V R ALR EDVPL EQTV+QVLQSA+EQ+KWSLL+
Sbjct: 121 LFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLLR 177
>BC015924-1|AAH15924.1| 210|Homo sapiens coatomer protein complex,
subunit zeta 2 protein.
Length = 210
Score = 212 bits (518), Expect = 1e-54
Identities = 99/174 (56%), Positives = 132/174 (75%)
Frame = +2
Query: 167 LFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLD 346
L EP+LY +K + ILD +G R+LAKYYD D P+ KEQ FEKN+FNKT R +EI
Sbjct: 38 LQEPSLYTIKAVFILDNDGRRLLAKYYD-DTFPSMKEQMVFEKNVFNKTSRTESEIAFFG 96
Query: 347 GLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVML 526
G+T VYK+++DLF YV+GSS+ENEL+L SVL L+ES++ +LR+N+E+R L+EN+D L
Sbjct: 97 GMTIVYKNSIDLFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGAFL 156
Query: 527 AFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAQVLQSAREQLKWSLLK 688
DEI DGGVIL++DP ++ + R +D L EQ+VAQVLQSA+EQ+KWSLLK
Sbjct: 157 VLDEIVDGGVILESDPQQVIQKVNFRADDGGLTEQSVAQVLQSAKEQIKWSLLK 210
>AB047849-1|BAB17660.1| 210|Homo sapiens zeta2-COP protein.
Length = 210
Score = 212 bits (518), Expect = 1e-54
Identities = 99/174 (56%), Positives = 132/174 (75%)
Frame = +2
Query: 167 LFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLD 346
L EP+LY +K + ILD +G R+LAKYYD D P+ KEQ FEKN+FNKT R +EI
Sbjct: 38 LQEPSLYTIKAVFILDNDGRRLLAKYYD-DTFPSMKEQMVFEKNVFNKTSRTESEIAFFG 96
Query: 347 GLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVML 526
G+T VYK+++DLF YV+GSS+ENEL+L SVL L+ES++ +LR+N+E+R L+EN+D L
Sbjct: 97 GMTIVYKNSIDLFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGAFL 156
Query: 527 AFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAQVLQSAREQLKWSLLK 688
DEI DGGVIL++DP ++ + R +D L EQ+VAQVLQSA+EQ+KWSLLK
Sbjct: 157 VLDEIVDGGVILESDPQQVIQKVNFRADDGGLTEQSVAQVLQSAKEQIKWSLLK 210
>AB037938-1|BAA90670.1| 210|Homo sapiens nonclathrin coat protein
zeta-COP protein.
Length = 210
Score = 212 bits (518), Expect = 1e-54
Identities = 99/174 (56%), Positives = 132/174 (75%)
Frame = +2
Query: 167 LFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLD 346
L EP+LY +K + ILD +G R+LAKYYD D P+ KEQ FEKN+FNKT R +EI
Sbjct: 38 LQEPSLYTIKAVFILDNDGRRLLAKYYD-DTFPSMKEQMVFEKNVFNKTSRTESEIAFFG 96
Query: 347 GLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVML 526
G+T VYK+++DLF YV+GSS+ENEL+L SVL L+ES++ +LR+N+E+R L+EN+D L
Sbjct: 97 GMTIVYKNSIDLFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGAFL 156
Query: 527 AFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAQVLQSAREQLKWSLLK 688
DEI DGGVIL++DP ++ + R +D L EQ+VAQVLQSA+EQ+KWSLLK
Sbjct: 157 VLDEIVDGGVILESDPQQVIQKVNFRADDGGLTEQSVAQVLQSAKEQIKWSLLK 210
>CR457100-1|CAG33381.1| 144|Homo sapiens AP4S1 protein.
Length = 144
Score = 39.1 bits (87), Expect = 0.017
Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Frame = +2
Query: 188 IVKGMCILDYEGNRILAKYYDK-DVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVY 364
++K +++ +G L+KYY+ D+ T + K+ ++++ I +Y
Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNE-QCSFIEYKDFKLIY 59
Query: 365 KSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEIC 544
+ LF V + ENE+ + ++ E + R E ++ NLD V + DE+
Sbjct: 60 RQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMF-NLDKVHIILDEMV 118
Query: 545 DGGVILDADPTSIVS 589
G I++ + I++
Sbjct: 119 LNGCIVETNRARILA 133
>AF155159-1|AAD43329.1| 144|Homo sapiens adaptor-related protein
complex AP-4 sigma4 subunit protein.
Length = 144
Score = 39.1 bits (87), Expect = 0.017
Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Frame = +2
Query: 188 IVKGMCILDYEGNRILAKYYDK-DVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVY 364
++K +++ +G L+KYY+ D+ T + K+ ++++ I +Y
Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNE-QCSFIEYKDFKLIY 59
Query: 365 KSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEIC 544
+ LF V + ENE+ + ++ E + R E ++ NLD V + DE+
Sbjct: 60 RQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMF-NLDKVHIILDEMV 118
Query: 545 DGGVILDADPTSIVS 589
G I++ + I++
Sbjct: 119 LNGCIVETNRARILA 133
>AB030654-1|BAA82970.1| 144|Homo sapiens AP-4 clathrin
adaptor-related complex sigma4 subunit protein.
Length = 144
Score = 39.1 bits (87), Expect = 0.017
Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Frame = +2
Query: 188 IVKGMCILDYEGNRILAKYYDK-DVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVY 364
++K +++ +G L+KYY+ D+ T + K+ ++++ I +Y
Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNE-QCSFIEYKDFKLIY 59
Query: 365 KSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEIC 544
+ LF V + ENE+ + ++ E + R E ++ NLD V + DE+
Sbjct: 60 RQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMF-NLDKVHIILDEMV 118
Query: 545 DGGVILDADPTSIVS 589
G I++ + I++
Sbjct: 119 LNGCIVETNRARILA 133
>AF393369-1|AAL09586.1| 154|Homo sapiens sigma 1C adaptin protein.
Length = 154
Score = 30.7 bits (66), Expect = 6.0
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 4/148 (2%)
Frame = +2
Query: 218 EGNRILAKYYDKDVLPTTKEQKAFEKNL----FNKTHRANAEIIMLDGLTCVYKSNVDLF 385
+G L K+Y LP KE+K + + ++ HR ++ + + L VYK L+
Sbjct: 11 QGKLRLQKWYI--TLPD-KERKKITREIVQIILSRGHRTSSFVDWKE-LKLVYKRYASLY 66
Query: 386 FYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEICDGGVILD 565
F + +NEL+ +++ E + E ++ N + DE GG I +
Sbjct: 67 FCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIF-NFEKAYFILDEFIIGGEIQE 125
Query: 566 ADPTSIVSRAALRTEDVPLGEQTVAQVL 649
V A+ D+ TV+Q +
Sbjct: 126 TSKKIAVK--AIEDSDMLQEVSTVSQTM 151
>AK090465-1|BAC03446.1| 811|Homo sapiens FLJ00386 protein protein.
Length = 811
Score = 30.3 bits (65), Expect = 7.9
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +2
Query: 518 VMLAFDEICDGGVILDA--DPTSIVSRAALRTEDVPLGEQTVAQVLQSAREQL 670
V + + + GG+ + A PT+ VS A+ + +PLG Q +AQV QS+ L
Sbjct: 406 VQMITEALAQGGMHIRARFPPTTAVS--AIPSSSIPLGRQPMAQVSQSSLPML 456
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,586,224
Number of Sequences: 237096
Number of extensions: 2588670
Number of successful extensions: 5853
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5845
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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