Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_G10
         (768 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2780|AAF49428.2|  174|Drosophila melanogaster CG3948-PA...   285   6e-77
AB037672-1|BAA90485.1|  174|Drosophila melanogaster nonclathrin ...   285   6e-77
AE014296-2781|AAN11737.1|  163|Drosophila melanogaster CG3948-PC...   277   9e-75
BT011358-1|AAR96150.1|  169|Drosophila melanogaster RE70427p pro...   258   8e-69
AE014296-2782|AAN11738.1|  169|Drosophila melanogaster CG3948-PB...   258   8e-69
AF145648-1|AAD38623.1|  448|Drosophila melanogaster BcDNA.GH0838...    32   0.99 
AE014296-3346|AAN12125.2|  448|Drosophila melanogaster CG5498-PB...    32   0.99 
AY075518-1|AAL68326.1|  278|Drosophila melanogaster RE68367p pro...    30   3.0  
AY071026-1|AAL48648.1|  191|Drosophila melanogaster RE10615p pro...    30   3.0  
AF228056-1|AAG43053.1|  191|Drosophila melanogaster adaptor prot...    30   3.0  
AE014297-28|AAF52158.1|  278|Drosophila melanogaster CG14643-PA ...    30   3.0  
AE013599-3755|AAF47120.2|  191|Drosophila melanogaster CG3029-PA...    30   3.0  
AY061172-1|AAL28720.1|  157|Drosophila melanogaster LD14109p pro...    29   7.0  
AF228054-1|AAG43051.1|  164|Drosophila melanogaster clathrin-ass...    29   7.0  
AE014297-3422|AAF56212.2|  157|Drosophila melanogaster CG5864-PA...    29   7.0  

>AE014296-2780|AAF49428.2|  174|Drosophila melanogaster CG3948-PA,
           isoform A protein.
          Length = 174

 Score =  285 bits (698), Expect = 6e-77
 Identities = 127/167 (76%), Positives = 155/167 (92%)
 Frame = +2

Query: 188 IVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVYK 367
           I+KGMCI+D +GNRILAKYYDK++L T KEQKAFEKNLFNKTHR+N EIIMLDGLTCVYK
Sbjct: 8   IIKGMCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYK 67

Query: 368 SNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEICD 547
           SNVDLFFYVMG+++ENELIL SVLN LY+S+SL+L++N+E+R+++ENL+ +MLAFDEICD
Sbjct: 68  SNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAFDEICD 127

Query: 548 GGVILDADPTSIVSRAALRTEDVPLGEQTVAQVLQSAREQLKWSLLK 688
           GG+ILDADP+S+V R  LR +D+P+ EQTVAQVLQSAREQLKWS+LK
Sbjct: 128 GGIILDADPSSVVKRVDLRNDDIPIAEQTVAQVLQSAREQLKWSILK 174


>AB037672-1|BAA90485.1|  174|Drosophila melanogaster nonclathrin
           coat protein zeta-COP protein.
          Length = 174

 Score =  285 bits (698), Expect = 6e-77
 Identities = 127/167 (76%), Positives = 155/167 (92%)
 Frame = +2

Query: 188 IVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVYK 367
           I+KGMCI+D +GNRILAKYYDK++L T KEQKAFEKNLFNKTHR+N EIIMLDGLTCVYK
Sbjct: 8   IIKGMCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYK 67

Query: 368 SNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEICD 547
           SNVDLFFYVMG+++ENELIL SVLN LY+S+SL+L++N+E+R+++ENL+ +MLAFDEICD
Sbjct: 68  SNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAFDEICD 127

Query: 548 GGVILDADPTSIVSRAALRTEDVPLGEQTVAQVLQSAREQLKWSLLK 688
           GG+ILDADP+S+V R  LR +D+P+ EQTVAQVLQSAREQLKWS+LK
Sbjct: 128 GGIILDADPSSVVKRVDLRNDDIPIAEQTVAQVLQSAREQLKWSILK 174


>AE014296-2781|AAN11737.1|  163|Drosophila melanogaster CG3948-PC,
           isoform C protein.
          Length = 163

 Score =  277 bits (680), Expect = 9e-75
 Identities = 124/163 (76%), Positives = 151/163 (92%)
 Frame = +2

Query: 200 MCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVYKSNVD 379
           MCI+D +GNRILAKYYDK++L T KEQKAFEKNLFNKTHR+N EIIMLDGLTCVYKSNVD
Sbjct: 1   MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYKSNVD 60

Query: 380 LFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEICDGGVI 559
           LFFYVMG+++ENELIL SVLN LY+S+SL+L++N+E+R+++ENL+ +MLAFDEICDGG+I
Sbjct: 61  LFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAFDEICDGGII 120

Query: 560 LDADPTSIVSRAALRTEDVPLGEQTVAQVLQSAREQLKWSLLK 688
           LDADP+S+V R  LR +D+P+ EQTVAQVLQSAREQLKWS+LK
Sbjct: 121 LDADPSSVVKRVDLRNDDIPIAEQTVAQVLQSAREQLKWSILK 163


>BT011358-1|AAR96150.1|  169|Drosophila melanogaster RE70427p
           protein.
          Length = 169

 Score =  258 bits (631), Expect = 8e-69
 Identities = 114/153 (74%), Positives = 141/153 (92%)
 Frame = +2

Query: 188 IVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVYK 367
           I+KGMCI+D +GNRILAKYYDK++L T KEQKAFEKNLFNKTHR+N EIIMLDGLTCVYK
Sbjct: 8   IIKGMCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYK 67

Query: 368 SNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEICD 547
           SNVDLFFYVMG+++ENELIL SVLN LY+S+SL+L++N+E+R+++ENL+ +MLAFDEICD
Sbjct: 68  SNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAFDEICD 127

Query: 548 GGVILDADPTSIVSRAALRTEDVPLGEQTVAQV 646
           GG+ILDADP+S+V R  LR +D+P+ EQTVAQV
Sbjct: 128 GGIILDADPSSVVKRVDLRNDDIPIAEQTVAQV 160


>AE014296-2782|AAN11738.1|  169|Drosophila melanogaster CG3948-PB,
           isoform B protein.
          Length = 169

 Score =  258 bits (631), Expect = 8e-69
 Identities = 114/153 (74%), Positives = 141/153 (92%)
 Frame = +2

Query: 188 IVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVYK 367
           I+KGMCI+D +GNRILAKYYDK++L T KEQKAFEKNLFNKTHR+N EIIMLDGLTCVYK
Sbjct: 8   IIKGMCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYK 67

Query: 368 SNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEICD 547
           SNVDLFFYVMG+++ENELIL SVLN LY+S+SL+L++N+E+R+++ENL+ +MLAFDEICD
Sbjct: 68  SNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAFDEICD 127

Query: 548 GGVILDADPTSIVSRAALRTEDVPLGEQTVAQV 646
           GG+ILDADP+S+V R  LR +D+P+ EQTVAQV
Sbjct: 128 GGIILDADPSSVVKRVDLRNDDIPIAEQTVAQV 160


>AF145648-1|AAD38623.1|  448|Drosophila melanogaster BcDNA.GH08385
           protein.
          Length = 448

 Score = 31.9 bits (69), Expect = 0.99
 Identities = 15/35 (42%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
 Frame = +2

Query: 467 LLRRNMERRVL-MENLDAVMLAFDEICDGGVILDA 568
           LL +N ERR L + N+++++ + DE  + GV+LDA
Sbjct: 295 LLEKNHERRSLALHNIESLLSSVDEAQNSGVVLDA 329


>AE014296-3346|AAN12125.2|  448|Drosophila melanogaster CG5498-PB
           protein.
          Length = 448

 Score = 31.9 bits (69), Expect = 0.99
 Identities = 15/35 (42%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
 Frame = +2

Query: 467 LLRRNMERRVL-MENLDAVMLAFDEICDGGVILDA 568
           LL +N ERR L + N+++++ + DE  + GV+LDA
Sbjct: 295 LLEKNHERRSLALHNIESLLSSVDEAQNSGVVLDA 329


>AY075518-1|AAL68326.1|  278|Drosophila melanogaster RE68367p
           protein.
          Length = 278

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 572 PTSIVSRAALRTEDVPLGEQTVAQVLQSAREQL 670
           PT+ VS+AALR +  P+ E+T+  VL    + L
Sbjct: 153 PTTSVSKAALRIKQAPVEEKTIIYVLTKKPDPL 185


>AY071026-1|AAL48648.1|  191|Drosophila melanogaster RE10615p
           protein.
          Length = 191

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 18/78 (23%), Positives = 36/78 (46%)
 Frame = +2

Query: 359 VYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDE 538
           +Y+    L+F     S E+EL +  ++    E++        E  ++  + DAV     E
Sbjct: 64  IYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIF-HADAVHHILSE 122

Query: 539 ICDGGVILDADPTSIVSR 592
           +  GG++L  +   I++R
Sbjct: 123 LVMGGMVLQTNMNDIMAR 140


>AF228056-1|AAG43053.1|  191|Drosophila melanogaster adaptor protein
           complex AP-3 smallchain sigma3 protein.
          Length = 191

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 18/78 (23%), Positives = 36/78 (46%)
 Frame = +2

Query: 359 VYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDE 538
           +Y+    L+F     S E+EL +  ++    E++        E  ++  + DAV     E
Sbjct: 64  IYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIF-HADAVHHILSE 122

Query: 539 ICDGGVILDADPTSIVSR 592
           +  GG++L  +   I++R
Sbjct: 123 LVMGGMVLQTNMNDIMAR 140


>AE014297-28|AAF52158.1|  278|Drosophila melanogaster CG14643-PA
           protein.
          Length = 278

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 572 PTSIVSRAALRTEDVPLGEQTVAQVLQSAREQL 670
           PT+ VS+AALR +  P+ E+T+  VL    + L
Sbjct: 153 PTTSVSKAALRIKQAPVEEKTIIYVLTKKPDPL 185


>AE013599-3755|AAF47120.2|  191|Drosophila melanogaster CG3029-PA
           protein.
          Length = 191

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 18/78 (23%), Positives = 36/78 (46%)
 Frame = +2

Query: 359 VYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDE 538
           +Y+    L+F     S E+EL +  ++    E++        E  ++  + DAV     E
Sbjct: 64  IYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIF-HADAVHHILSE 122

Query: 539 ICDGGVILDADPTSIVSR 592
           +  GG++L  +   I++R
Sbjct: 123 LVMGGMVLQTNMNDIMAR 140


>AY061172-1|AAL28720.1|  157|Drosophila melanogaster LD14109p
           protein.
          Length = 157

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 19/92 (20%), Positives = 41/92 (44%)
 Frame = +2

Query: 359 VYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDE 538
           VYK    L+F      ++NEL+   +++   E +        E  ++  N +      DE
Sbjct: 58  VYKRYASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIF-NFEKAYFILDE 116

Query: 539 ICDGGVILDADPTSIVSRAALRTEDVPLGEQT 634
           +  GG I +    +++   A+ ++D+   ++T
Sbjct: 117 LLIGGEIQETSKKNVLK--AIASQDLLQEDET 146


>AF228054-1|AAG43051.1|  164|Drosophila melanogaster
           clathrin-associated adaptor complexAP-1 small chain
           sigma1 protein.
          Length = 164

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 19/92 (20%), Positives = 41/92 (44%)
 Frame = +2

Query: 359 VYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDE 538
           VYK    L+F      ++NEL+   +++   E +        E  ++  N +      DE
Sbjct: 58  VYKRYASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIF-NFEKAYFILDE 116

Query: 539 ICDGGVILDADPTSIVSRAALRTEDVPLGEQT 634
           +  GG I +    +++   A+ ++D+   ++T
Sbjct: 117 LLIGGEIQETSKKNVLK--AIASQDLLQEDET 146


>AE014297-3422|AAF56212.2|  157|Drosophila melanogaster CG5864-PA
           protein.
          Length = 157

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 19/92 (20%), Positives = 41/92 (44%)
 Frame = +2

Query: 359 VYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDE 538
           VYK    L+F      ++NEL+   +++   E +        E  ++  N +      DE
Sbjct: 58  VYKRYASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIF-NFEKAYFILDE 116

Query: 539 ICDGGVILDADPTSIVSRAALRTEDVPLGEQT 634
           +  GG I +    +++   A+ ++D+   ++T
Sbjct: 117 LLIGGEIQETSKKNVLK--AIASQDLLQEDET 146


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,813,641
Number of Sequences: 53049
Number of extensions: 741485
Number of successful extensions: 1859
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1859
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)