Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_G09
(764 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2G5.05 |||transketolase |Schizosaccharomyces pombe|chr 2|||M... 111 1e-25
SPAC26F1.03 |pda1||pyruvate dehydrogenase e1 component alpha sub... 43 4e-05
SPBC24C6.09c |||phosphoketolase |Schizosaccharomyces pombe|chr 2... 38 0.002
SPAC8C9.09c |mug129||sequence orphan|Schizosaccharomyces pombe|c... 27 2.9
SPBC725.04 |||oxalyl-CoA decarboxylase |Schizosaccharomyces pomb... 27 2.9
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 27 3.9
SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr 2... 26 6.8
>SPBC2G5.05 |||transketolase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 685
Score = 111 bits (267), Expect = 1e-25
Identities = 77/224 (34%), Positives = 115/224 (51%), Gaps = 16/224 (7%)
Frame = +3
Query: 141 SIVATNASKSGHPTSCASMAEXMSVLFFHTMRYKISAPRDASADRFILSKGHAAPILYAA 320
++ T +KSGHP + +A VLF M++ + P+ + DRFILS GHA + Y
Sbjct: 21 AVDTTAHAKSGHPGAPMGLAPAAHVLFSRIMKFNPAHPKWLNRDRFILSNGHACVLQYIM 80
Query: 321 WAEAGL-FPLDELKNLRKLDSDLEGHP---TPRLNFVDVGTGSLGQGLAVAAGMAYVGKY 488
G +++LK R++ S GHP P LN ++ G G LGQG+A A G+A +GK
Sbjct: 81 CHLLGYKLTIEDLKQFRQVGSKTPGHPETHNPDLN-IETGAGPLGQGIASAVGLA-IGKA 138
Query: 489 FDQAPYR----------VYCLVGDGEAAEGSIWESLHFASHYKLDNLVVIFDVNRLGQSE 638
A Y +C +GDG EG E+ A H KL NL+ ++D N++
Sbjct: 139 HSAAVYNKPGFDLFSNYTFCFLGDGCLQEGVSSEACSLAGHLKLSNLIAVWDNNKITIDG 198
Query: 639 PTSLQHQLEVYDARLKAFGLNSL-VVDGH-DVTELVKAFDEAXS 764
TS+ +V + R +A+G N + V +G D+ + K F EA S
Sbjct: 199 ATSMSFDEDV-EKRFEAYGWNIVRVANGDTDLDGIEKGFREAMS 241
>SPAC26F1.03 |pda1||pyruvate dehydrogenase e1 component alpha
subunit Pda1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 43.2 bits (97), Expect = 4e-05
Identities = 29/107 (27%), Positives = 52/107 (48%)
Frame = +3
Query: 426 GTGSLGQGLAVAAGMAYVGKYFDQAPYRVYCLVGDGEAAEGSIWESLHFASHYKLDNLVV 605
G G +G + + AG+ + KY ++ P + L GDG + +G +E+ + A KL L V
Sbjct: 180 GNGIVGAQIPLGAGIGFAQKYLEK-PTTTFALYGDGASNQGQAFEAFNMA---KLWGLPV 235
Query: 606 IFDVNRLGQSEPTSLQHQLEVYDARLKAFGLNSLVVDGHDVTELVKA 746
IF TS + + + + + L+V+G DV +++A
Sbjct: 236 IFACENNKYGMGTSAERSSAMTEFYKRGQYIPGLLVNGMDVLAVLQA 282
>SPBC24C6.09c |||phosphoketolase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 825
Score = 37.5 bits (83), Expect = 0.002
Identities = 40/135 (29%), Positives = 58/135 (42%), Gaps = 12/135 (8%)
Frame = +3
Query: 276 FILSKGHAAP-ILYAAWAEAGLFPL--------DELKNLRKLDSDLEGHPTPRLNFVDVG 428
F++ GH AP IL A + E L P + L NL S G P+ +N G
Sbjct: 125 FVVGPGHGAPAILSALFLEDSLGPFYPRYQFTKEGLNNLINTFSLPGGFPS-HVNAEVPG 183
Query: 429 TGSLGQGLAVAAGMAYVGKYFDQAPYRVYCLVGDGEAAEG---SIWESLHFASHYKLDNL 599
G L A ++Y G D+ V C+VGDGEA G + W + F + +
Sbjct: 184 AIHEGGELGYALSVSY-GAVLDRPDLIVTCVVGDGEAETGPTATSWHAHKFLDPAESGAV 242
Query: 600 VVIFDVNRLGQSEPT 644
+ + ++N SE T
Sbjct: 243 IPVLELNGYKISERT 257
>SPAC8C9.09c |mug129||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 302
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -2
Query: 499 AWSKYFPTYAMPAATASPWP-REPV 428
AWS + TY AAT SP P ++PV
Sbjct: 181 AWSLFTSTYFQKAATVSPSPNQQPV 205
>SPBC725.04 |||oxalyl-CoA decarboxylase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 2.9
Identities = 26/100 (26%), Positives = 45/100 (45%)
Frame = +3
Query: 321 WAEAGLFPLDELKNLRKLDSDLEGHPTPRLNFVDVGTGSLGQGLAVAAGMAYVGKYFDQA 500
W G +D + L ++ HP RL+ + T +G G A+A+ A+ D+
Sbjct: 390 WVSEGANTMDRGRQLLEVT-----HPRGRLDAGTMSTMGVGMGYAIASAFAHSS---DK- 440
Query: 501 PYRVYCLVGDGEAAEGSIWESLHFASHYKLDNLVVIFDVN 620
+V +G++A G L A +LD LV++ + N
Sbjct: 441 -----IVVVEGDSAFGFSAMELETAIRNQLDLLVIVINNN 475
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2
Query: 472 AMPAATASPWPREPVPTSTK 413
A P ATAS P EP P+S K
Sbjct: 401 AKPGATASTTPSEPPPSSIK 420
>SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 485
Score = 25.8 bits (54), Expect = 6.8
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 469 MPAATASPWPREPVPTSTKLS 407
+P+++ S W EP P+ST+ S
Sbjct: 204 LPSSSTSSWADEPSPSSTETS 224
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,698,797
Number of Sequences: 5004
Number of extensions: 51699
Number of successful extensions: 150
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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