Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_G09
(764 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0237 - 1808203-1809159,1809246-1809399,1809488-1809636,180... 95 5e-20
04_03_0092 + 11079185-11079589,11081319-11081409,11081507-110816... 83 3e-16
04_01_0110 + 1123238-1123450,1124211-1124997,1126126-1126403 38 0.007
12_01_0535 + 4208410-4208661,4209529-4209627,4210125-4210265,421... 34 0.11
01_06_1315 + 36226262-36226533,36227946-36228060,36228710-362287... 31 1.0
05_04_0284 - 19813179-19813340,19813464-19813748,19813850-198141... 31 1.3
11_02_0053 - 7797580-7798731 30 1.8
05_04_0280 - 19752112-19752451,19754104-19755587 29 4.1
03_06_0244 + 32613914-32614666 29 4.1
07_03_0043 - 12741661-12741816,12741980-12742153,12742870-127429... 29 5.4
02_01_0420 + 3076493-3076646,3076721-3077704,3078013-3078824 29 5.4
01_01_1125 - 8920590-8924372 29 5.4
03_05_1137 + 30652967-30653183,30653281-30653485,30653696-306537... 28 7.1
02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184 28 7.1
02_02_0737 - 13529180-13529543,13530661-13531178 28 7.1
02_02_0597 - 11996350-11996483,11997511-11997604,11997877-119980... 28 7.1
11_06_0174 - 20907202-20907258,20907875-20908024,20908293-209084... 28 9.4
01_05_0742 - 24829151-24829307,24829894-24830136,24830175-24830251 28 9.4
>06_01_0237 -
1808203-1809159,1809246-1809399,1809488-1809636,
1809715-1809997,1810087-1810192,1810293-1810383,
1810779-1811270
Length = 743
Score = 95.1 bits (226), Expect = 5e-20
Identities = 69/217 (31%), Positives = 104/217 (47%), Gaps = 13/217 (5%)
Frame = +3
Query: 135 IDSIVATNASKSGHPTSCASMAEXMSVLFFHTMRYKISAPRDASADRFILSKGHAAPILY 314
ID++ N+ G P CA M +L+ MRY P + DRFILS GH + Y
Sbjct: 96 IDAVEKANSGHPGLPMGCAPMGH---ILYDEVMRYNPKNPYWFNRDRFILSAGHGCMLQY 152
Query: 315 AAWAEAGLFPL--DELKNLRKLDSDLEGHPTP-RLNFVDVGTGSLGQGLAVAAGMAYVGK 485
A AG + ++LK R+ S GHP V+V TG LGQG+A A G+A K
Sbjct: 153 ALLHLAGYDAVLEEDLKQFRQWGSKTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEK 212
Query: 486 YF---------DQAPYRVYCLVGDGEAAEGSIWESLHFASHYKLDNLVVIFDVNRLGQSE 638
+ + + YC++GDG EG E+ A H+ L L+ +D N +
Sbjct: 213 HLAARFNKPDSEIVDHYTYCILGDGCQMEGISNEACSLAGHWGLGKLIAFYDDNHISIDG 272
Query: 639 PTSLQHQLEVYDARLKAFGLNSL-VVDGHDVTELVKA 746
T + +V AR +A G +++ V +G+D + ++A
Sbjct: 273 DTEIAFTEDV-SARFEALGWHTIWVKNGNDGYDEIRA 308
>04_03_0092 +
11079185-11079589,11081319-11081409,11081507-11081612,
11081694-11081976,11082062-11082210,11083582-11083735,
11083837-11084793
Length = 714
Score = 82.6 bits (195), Expect = 3e-16
Identities = 64/203 (31%), Positives = 94/203 (46%), Gaps = 12/203 (5%)
Frame = +3
Query: 141 SIVATNASKSGHPTSCASMAEXMSVLFFHTMRYKISAPRDASADRFILSKGHAAPILYAA 320
++ + +KSGHP A VLF +R+ P DRFILS GH + YA
Sbjct: 66 AVDSVEKAKSGHPGLPMGCAPLGHVLFDEFLRFNPKNPYWFDRDRFILSAGHGCMLQYAL 125
Query: 321 WAEAGL--FPLDELKNLRKLDSDLEGHPTP-RLNFVDVGTGSLGQGLAVAAGMAYVGKY- 488
AG +D+LK R+ S GHP V+V TG LGQG A A G+A K+
Sbjct: 126 LHLAGYDSVTMDDLKAFRQWGSRTPGHPENFETPGVEVTTGPLGQGFANAVGLALAEKHL 185
Query: 489 ---FDQAPYRV-----YCLVGDGEAAEGSIWESLHFASHYKLDNLVVIFDVNRLGQSEPT 644
F++ ++ Y ++GDG EG E+ A H+ L L+ +D N + T
Sbjct: 186 AARFNKPDLKIVDHHTYVILGDGCQMEGVSNEASSLAGHWGLGKLIAFYDDNHISIDGST 245
Query: 645 SLQHQLEVYDARLKAFGLNSLVV 713
+ + AR +A G +++ V
Sbjct: 246 GIAFTEDAL-ARYEALGWHTIWV 267
>04_01_0110 + 1123238-1123450,1124211-1124997,1126126-1126403
Length = 425
Score = 38.3 bits (85), Expect = 0.007
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Frame = +3
Query: 426 GTGSLGQGLAVAAGMAYVGKYFDQAPYR--------VYCLVGDGEAAEGSIWESLHFASH 581
G +G+G+ VA G A+ KY + + GDG G +E L+ A
Sbjct: 182 GFAFIGEGIPVATGAAFAAKYRHEVLKQSSPDGLDVTLAFFGDGTCNNGQFFECLNMAQL 241
Query: 582 YKLDNLVVI-FDVNRLGQSEPTSLQHQLEVYDARLKAFGLNSLVVDGHDVTELVKAFDEA 758
+KL + V+ ++ +G S + E+Y + AFG+ + VDG DV ++ + EA
Sbjct: 242 WKLPIVFVVENNLWAIGMSHLRATSDP-EIY-KKGPAFGMPGVHVDGMDVLKVREVAKEA 299
>12_01_0535 +
4208410-4208661,4209529-4209627,4210125-4210265,
4210378-4210560,4210664-4210821,4210905-4211004,
4211085-4211196,4211241-4211419,4211489-4211674,
4211762-4211929
Length = 525
Score = 34.3 bits (75), Expect = 0.11
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 14/132 (10%)
Frame = +3
Query: 405 RLNFVDVGTGSLGQGLAVAAGMAYVGKYFDQAPYRVYCLVGDGEAAEGSIWESLHFASHY 584
RLN+ V + Q L A G AY K D+ GDG +EG +L+FA+
Sbjct: 267 RLNYFTVSSPIATQ-LPHAVGAAYSLK-MDKKDACAITYFGDGGTSEGDFHAALNFAA-- 322
Query: 585 KLDNLVVIFDVNR-LGQSEPTSLQHQLEVYD-------------ARLKAFGLNSLVVDGH 722
++ V+ F N S PTS Q + ++Y+ R +A+G+ S+ VDG+
Sbjct: 323 VMEAPVIFFCRNNGWAISTPTSEQFRSDLYNNLNSTAIAGDGAVIRGQAYGMRSIRVDGN 382
Query: 723 DVTELVKAFDEA 758
D + A A
Sbjct: 383 DALAVYSAVHTA 394
>01_06_1315 +
36226262-36226533,36227946-36228060,36228710-36228752,
36229953-36230329,36230330-36230481,36230591-36230838,
36230919-36231047,36231130-36231739,36231842-36232086,
36232195-36232325
Length = 773
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -2
Query: 580 WLAKCSDSQMLPSAAS-PSPTRQYTL*GAWSKYFPTYAMPAATASPWPREPVPTST 416
+LAKC+ S +LPSA + P + AW+ + P +A+P A P P P S+
Sbjct: 159 FLAKCTTSLLLPSATTKPVQKLRPGSRTAWAGH-PKWALPVAYEMPAPPPPHAASS 213
>05_04_0284 -
19813179-19813340,19813464-19813748,19813850-19814131,
19814224-19814531,19814654-19814927,19815807-19816175,
19816372-19816434,19817495-19817789,19817818-19818008,
19818123-19818428,19818516-19818638
Length = 885
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 462 AGMAYVGKYFDQAPYRVYCLVGDGEAAEGSIWESLHFASHYKLDNLVVIFD 614
AGMA VG+ V ++GDG G +E+++ A + D +V++ D
Sbjct: 214 AGMA-VGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 263
>11_02_0053 - 7797580-7798731
Length = 383
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = -3
Query: 666 LPADVAERWARTAPDG*HRR*RRGCPACSGWRSAA 562
+P DVA P G HR RR C GWRSAA
Sbjct: 27 MPDDVAVDCLARVPHGAHRAMRR---VCRGWRSAA 58
>05_04_0280 - 19752112-19752451,19754104-19755587
Length = 607
Score = 29.1 bits (62), Expect = 4.1
Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 4/97 (4%)
Frame = -1
Query: 530 VAHQAIHPVGRLVEVLPDVCHAGRHGEPLAQ-GAGADVHEVKS--RGGXXXXXXXXXXXX 360
+ ++A GR+ E +C G+HG + G GADV E GG
Sbjct: 463 IMYKAYVSSGRMAEANTILCMMGKHGFGFPRGGTGADVEEASDGIGGGDVSGVRDSPVLG 522
Query: 359 XXXXXREQPGLRP-RRVQDRRCVTLGKNKSVGGSVPW 252
P LR RR Q +R L + + +G ++ W
Sbjct: 523 VDSSEVAAPYLRQCRRSQRQRRWRLVEGEVMGMALTW 559
>03_06_0244 + 32613914-32614666
Length = 250
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 258 PVARRSCTALCGRREQTLXQPLTR 187
PV RR C CGRRE P R
Sbjct: 46 PVMRRRCRRRCGRRESVTGSPRVR 69
>07_03_0043 -
12741661-12741816,12741980-12742153,12742870-12742932,
12744107-12744214,12744303-12744418,12745188-12745314,
12746423-12746592,12747409-12747487,12747558-12747669,
12748064-12748154,12748425-12748534,12748536-12748666,
12749557-12749817
Length = 565
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -2
Query: 247 EILYRIVWKKRTDIXSAIDAHDVG*PDFEAFVATILSMTQFV 122
++ +R+ + +I AID++ G DFE FVA L + Q V
Sbjct: 440 DVPWRLKGPRVLEIVEAIDSNTDGLVDFEEFVAATLHVHQLV 481
>02_01_0420 + 3076493-3076646,3076721-3077704,3078013-3078824
Length = 649
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -1
Query: 584 VVAGEVQRLPDAALGRLSVAHQAIHPVGRLVEVLPDVCHAGRHGE 450
+V G+ L DA G ++ +H GRL+E + V HGE
Sbjct: 520 IVTGKKAMLNDAQFGHITDWVWHLHQRGRLLEAVDGVLGTAGHGE 564
>01_01_1125 - 8920590-8924372
Length = 1260
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 481 PTYAMPAATASPWPREPVPTSTKLSRGV 398
P AMP A P P P+P+ KL R V
Sbjct: 167 PPSAMPLAGGEPRPPPPLPSLVKLGRAV 194
>03_05_1137 +
30652967-30653183,30653281-30653485,30653696-30653786,
30653904-30654046,30654186-30654429,30654536-30654640,
30654985-30655167,30655255-30655459,30655552-30656036
Length = 625
Score = 28.3 bits (60), Expect = 7.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 358 RTCASWTRTWRATPPRDLTSWTS 426
R C WT TW+ P ++T+ T+
Sbjct: 445 RQCGGWTITWQGQPGNNITAGTT 467
>02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184
Length = 544
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 391 ATPPRDLTSWTSAPAPW 441
A PPR SW +PAPW
Sbjct: 261 AFPPRRPNSWAPSPAPW 277
>02_02_0737 - 13529180-13529543,13530661-13531178
Length = 293
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 610 KMTTRLSSL*WLAKCSDSQMLPSAASPSPTRQYT 509
+ T R SS WLA+ +D A++PSP +Y+
Sbjct: 217 RRTLRASSFTWLARFADFATGSGASTPSPPGRYS 250
>02_02_0597 -
11996350-11996483,11997511-11997604,11997877-11998032,
11998580-11998639,11998733-11998951,11999038-11999377,
12001240-12001571
Length = 444
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 177 PTSCASMAEXMSVLFFHTMRYKISAPRDASADRFILSKGHAAPILYAAWAEA 332
PT +MA + +RYKISA D R +L H P ++ + A
Sbjct: 30 PTRGGAMAAAGDKMSIRAVRYKISASVDDRGPRPVLPLAHGDPSVFPEFRTA 81
>11_06_0174 -
20907202-20907258,20907875-20908024,20908293-20908414,
20908748-20908901,20909040-20909249
Length = 230
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = +3
Query: 351 ELKNLRKLDSDLEGHPTPRLNFVDVGTGSLGQGLAVAAGMAYVGKY 488
EL N D L HP PRLN V G G+G V A VG +
Sbjct: 38 ELLNFMTYDR-LACHPGPRLNLV-AGPNGSGKGSLVLGRAASVGAF 81
>01_05_0742 - 24829151-24829307,24829894-24830136,24830175-24830251
Length = 158
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 367 ASWTRTWRATPPRDLTSWTSAPAPWARGSP 456
ASW ++TPPR L+S ++ P+ WA P
Sbjct: 53 ASWAN--QSTPPRWLSSASAPPSSWAPPPP 80
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,960,584
Number of Sequences: 37544
Number of extensions: 433339
Number of successful extensions: 1644
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1634
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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