Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_G08
         (583 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   3.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   3.3  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   4.4  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   5.8  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   7.6  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = +3

Query: 135 CYIRXFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSS 266
           CY     G     S+  S++ +C RY  A D        D L S
Sbjct: 616 CYHAVAPGTDIRQSIALSRKKKCIRYMEAGDGNDGNQSDDNLGS 659


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = +3

Query: 135 CYIRXFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSS 266
           CY     G     S+  S++ +C RY  A D        D L S
Sbjct: 508 CYHAVAPGTDIRQSIALSRKKKCIRYMEAGDGNDGNQSDDNLGS 551


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 274 GVSLLSSSLHDWCMTASCAQKYRVHSASFEYV 179
           G+  LS SL    +  +   K+RV SA  EY+
Sbjct: 398 GIQQLSQSLLPAIVELAEDSKWRVRSAIIEYM 429


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 438 DVCCLNIIFYHIYF 479
           +VCCLN+    I+F
Sbjct: 59  NVCCLNLSIVTIFF 72


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 319 QIM*VFSSGFVKVHTGVSLLSSSL 248
           Q +  F +GF  V TGVS ++  L
Sbjct: 272 QALLFFFAGFETVSTGVSFMAYEL 295


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,780
Number of Sequences: 336
Number of extensions: 2714
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)