Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_G08
         (583 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79602-3|CAB01890.1|  474|Caenorhabditis elegans Hypothetical pr...    30   1.0  
AL132860-1|CAB60513.2|  616|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p...    28   5.6  
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr...    28   5.6  
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ...    28   5.6  
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ...    28   5.6  
AC084154-10|AAK29873.1| 1140|Caenorhabditis elegans Hypothetical...    27   7.4  
Z49130-1|CAA88965.2|  708|Caenorhabditis elegans Hypothetical pr...    27   9.7  

>Z79602-3|CAB01890.1|  474|Caenorhabditis elegans Hypothetical
           protein K09E9.3 protein.
          Length = 474

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 417 YIFFNFHDVCCLNIIFYHIYFM 482
           Y+F   H V CLNI ++H+YF+
Sbjct: 452 YLFI-IHPVFCLNITYFHLYFI 472


>AL132860-1|CAB60513.2|  616|Caenorhabditis elegans Hypothetical
           protein Y56A3A.2 protein.
          Length = 616

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = +3

Query: 153 DGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSSDTPVCTFTKPEENTHIICV 323
           D  LP+  V   +E + T+Y C H   + Q      ++  P  T   P  +   ICV
Sbjct: 433 DDALPYGGVAQPEEKKITKYSCLHARYVVQQAL--CNASEPCKTEETPAAHQEKICV 487


>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical
           protein T06D8.1b protein.
          Length = 3653

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +3

Query: 183 YSKEAECTRYFCAHDAVIHQS-CKDELSSDTPVCTFTKPEENTHIIC 320
           Y  + E  ++  A D ++ Q  C+DE SSD  V T  K      I C
Sbjct: 310 YKSDTETCQFTVATDDLVDQEHCEDEKSSDRMVDTVEKTMIPVQITC 356


>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical
           protein T06D8.1a protein.
          Length = 3719

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +3

Query: 183 YSKEAECTRYFCAHDAVIHQS-CKDELSSDTPVCTFTKPEENTHIIC 320
           Y  + E  ++  A D ++ Q  C+DE SSD  V T  K      I C
Sbjct: 310 YKSDTETCQFTVATDDLVDQEHCEDEKSSDRMVDTVEKTMIPVQITC 356


>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
           protein T06D8.1b protein.
          Length = 3653

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +3

Query: 183 YSKEAECTRYFCAHDAVIHQS-CKDELSSDTPVCTFTKPEENTHIIC 320
           Y  + E  ++  A D ++ Q  C+DE SSD  V T  K      I C
Sbjct: 310 YKSDTETCQFTVATDDLVDQEHCEDEKSSDRMVDTVEKTMIPVQITC 356


>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical
           protein T06D8.1a protein.
          Length = 3719

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +3

Query: 183 YSKEAECTRYFCAHDAVIHQS-CKDELSSDTPVCTFTKPEENTHIIC 320
           Y  + E  ++  A D ++ Q  C+DE SSD  V T  K      I C
Sbjct: 310 YKSDTETCQFTVATDDLVDQEHCEDEKSSDRMVDTVEKTMIPVQITC 356


>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
           protein T06D8.1b protein.
          Length = 3653

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +3

Query: 183 YSKEAECTRYFCAHDAVIHQS-CKDELSSDTPVCTFTKPEENTHIIC 320
           Y  + E  ++  A D ++ Q  C+DE SSD  V T  K      I C
Sbjct: 310 YKSDTETCQFTVATDDLVDQEHCEDEKSSDRMVDTVEKTMIPVQITC 356


>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
           protein T06D8.1a protein.
          Length = 3719

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +3

Query: 183 YSKEAECTRYFCAHDAVIHQS-CKDELSSDTPVCTFTKPEENTHIIC 320
           Y  + E  ++  A D ++ Q  C+DE SSD  V T  K      I C
Sbjct: 310 YKSDTETCQFTVATDDLVDQEHCEDEKSSDRMVDTVEKTMIPVQITC 356


>AC084154-10|AAK29873.1| 1140|Caenorhabditis elegans Hypothetical
           protein Y22D7AR.2 protein.
          Length = 1140

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
 Frame = -3

Query: 524 NISIFKLSFQNYIIHEIYMIKNNIQAANIMKIKENILFL-LMNRSHYLKSLKFLPVYLVI 348
           +IS   L+     + E +  KN++  + + K++ENI  L  +     L++     ++ + 
Sbjct: 411 HISYPSLNLVYKAVAEFFPYKNSLDGSLLSKVQENINHLSKLAVEMKLEAPMISQLHKMF 470

Query: 347 FSRRLCLKNTDYVSIFFWLCKGTHRGVAAQLIFTRLVYDSIVRAEVSGAFCFLRVCYRIK 168
            SR   LKNTD +     L  G       Q+IF  L  D +       A+  ++   ++K
Sbjct: 471 LSR--SLKNTDNIKFISGLLNGIS---DIQMIFNDLRNDWVNETVAGQAYNLVKALNQLK 525


>Z49130-1|CAA88965.2|  708|Caenorhabditis elegans Hypothetical
           protein T06D8.2 protein.
          Length = 708

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
 Frame = -2

Query: 447 SKHHEN*RKYIIFVNEP-QSLFEE-----FEISSCVLGHFFKKALFKEHR 316
           SKH EN ++ I  + E   SL  E     FE  SC+L H  K+ LF  ++
Sbjct: 474 SKHFENRKEGIEEIREKIDSLSAEKTSKYFESISCLLAHLLKEPLFTVYK 523


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,695,897
Number of Sequences: 27780
Number of extensions: 242850
Number of successful extensions: 578
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)