Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_G08
(583 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 23 2.2
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 23 2.2
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 23 2.2
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 23 2.2
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 2.2
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 23 2.9
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 22 3.8
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 5.1
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 6.7
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 6.7
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 8.9
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 8.9
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 8.9
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 8.9
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 21 8.9
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 8.9
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 488 YNSENSI*KLKY*NINIVRQ 547
+N+ N+ KL+Y NIN + Q
Sbjct: 91 HNNNNNYKKLQYYNINYIEQ 110
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 488 YNSENSI*KLKY*NINIVRQ 547
+N+ N+ KL+Y NIN + Q
Sbjct: 91 HNNNNNYKKLQYYNINYIEQ 110
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 488 YNSENSI*KLKY*NINIVRQ 547
+N+ N+ KL+Y NIN + Q
Sbjct: 91 HNNNNNYKKLQYYNINYIEQ 110
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 488 YNSENSI*KLKY*NINIVRQ 547
+N+ N+ KL+Y NIN + Q
Sbjct: 91 HNNNNNYKKLQYYNINYIEQ 110
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 488 YNSENSI*KLKY*NINIVRQ 547
+N+ N+ KL+Y NIN + Q
Sbjct: 324 HNNNNNYKKLQYYNINYIEQ 343
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = +2
Query: 272 PCVYLYKARRKYSHNLCSLNK 334
P Y Y + Y H + S NK
Sbjct: 88 PDTYFYNGKHSYLHTITSPNK 108
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 488 YNSENSI*KLKY*NINIVRQ 547
YN++N+ K Y NIN + Q
Sbjct: 96 YNNDNNYNKKLYYNINYIEQ 115
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 5.1
Identities = 13/52 (25%), Positives = 22/52 (42%)
Frame = +3
Query: 159 VLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSSDTPVCTFTKPEENTHI 314
+L D+ Y+ + + A + S + LSS + TKPE + I
Sbjct: 509 ILSMDNTQYNLDLSLPQLDSTELADLDISLSENLSSGLSISDSTKPETSKGI 560
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 488 YNSENSI*KLKY*NINIVRQ 547
YN+ N+ K Y NIN + Q
Sbjct: 96 YNNNNNYNKKLYYNINYIEQ 115
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 488 YNSENSI*KLKY*NINIVRQ 547
YN+ N+ K Y NIN + Q
Sbjct: 334 YNNNNNYNKKLYYNINYIEQ 353
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 8.9
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +2
Query: 464 LSYIFHG*YNSENSI*KLKY*NINIVRQ 547
+S + + ++ N+ KL+Y NIN + Q
Sbjct: 304 ISSLLNNTIHNNNNYKKLQYYNINYIEQ 331
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 8.9
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +2
Query: 464 LSYIFHG*YNSENSI*KLKY*NINIVRQ 547
+S + + ++ N+ KL+Y NIN + Q
Sbjct: 315 ISSLLNNTIHNNNNYKKLQYYNINYIEQ 342
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 8.9
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +2
Query: 464 LSYIFHG*YNSENSI*KLKY*NINIVRQ 547
+S + + ++ N+ KL+Y NIN + Q
Sbjct: 315 ISSLLNNTIHNNNNYKKLQYYNINYIEQ 342
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 8.9
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +2
Query: 464 LSYIFHG*YNSENSI*KLKY*NINIVRQ 547
+S + + ++ N+ KL+Y NIN + Q
Sbjct: 304 ISSLLNNTIHNNNNYKKLQYYNINYIEQ 331
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -3
Query: 464 KNNIQAANIMKIKENILFLLMN 399
K +QA +K+K I F+L++
Sbjct: 346 KETLQAITGLKVKRRISFILVH 367
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.0 bits (42), Expect = 8.9
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = -3
Query: 338 RLCLKNTDYVSIFFWLCKGTHRG 270
+L +KN DY ++C+ + G
Sbjct: 458 KLIIKNVDYADTGAYMCQASSIG 480
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,336
Number of Sequences: 438
Number of extensions: 3074
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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