Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_G04
         (773 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         25   1.0  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    25   1.0  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    25   1.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.8  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   7.3  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -2

Query: 622 CWRERRTRHVRTLERHNLR 566
           CW E RT     LERHN+R
Sbjct: 329 CWNEHRT-----LERHNIR 342


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -2

Query: 622 CWRERRTRHVRTLERHNLR 566
           CW E RT     LERHN+R
Sbjct: 329 CWNEHRT-----LERHNIR 342


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -2

Query: 622 CWRERRTRHVRTLERHNLR 566
           CW E RT     LERHN+R
Sbjct: 329 CWNEHRT-----LERHNIR 342


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 494  PPPWSPTLRMAPLPLSPTLVMPE 562
            PPP+ P+  MA  P  PT ++PE
Sbjct: 1166 PPPFMPSPFMAGAPNVPT-ILPE 1187


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 7/49 (14%)
 Frame = -3

Query: 615  GSGVRGMSEHWS-------AITCVSSGITSVGDNGSGAIRSVGDHGGGY 490
            G GV+GM+  +          T  +S +  V   GSG + S   H GG+
Sbjct: 886  GQGVQGMNVPYGMQRGQSGGQTWSNSQVQGVAVPGSGIVASGQQHAGGW 934


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.315    0.129    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,145
Number of Sequences: 438
Number of extensions: 1251
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)