Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_G03
         (862 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    27   0.55 
AY070234-1|AAL58538.1|  223|Anopheles gambiae glutathione S-tran...    25   2.2  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    24   6.8  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   6.8  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   6.8  

>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 27.5 bits (58), Expect = 0.55
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = +2

Query: 524 EALYSTILGHV--DTGDEVIIIEPYFDCYDFMV 616
           + ++S ++GHV   T + V ++  YF+C  FMV
Sbjct: 273 QTVFSLLVGHVITKTSEAVPLLGTYFNCIMFMV 305


>AY070234-1|AAL58538.1|  223|Anopheles gambiae glutathione
           S-transferase E3 protein.
          Length = 223

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 9/21 (42%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = -3

Query: 248 LHNVPAI-ETFLPLYDKHSIV 189
           +H VP + +  +PLYD H+I+
Sbjct: 52  MHTVPTVNDNGVPLYDSHAII 72


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = +2

Query: 560 TGDEVIIIEPYFDCYDFMVKCAGGVPRFIALKPKPQGDDISSADWV 697
           T D V ++  YF+C  FMV  +      I        D    +DWV
Sbjct: 302 TSDAVPLLGTYFNCIMFMVASSVVSTILILNYHHRNADTHEMSDWV 347


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 10/57 (17%), Positives = 29/57 (50%)
 Frame = +2

Query: 692  WVLXEAELASLFNNRTKMIIVNTPHNPLGKVFTQRELELIADLCXKHNVLCLSDEVY 862
            W++    + S+      ++++      L  +FT+REL+++ D+  +      +D+++
Sbjct: 998  WLIKSFSITSILFPLMLVVMIGV-RKSLDYIFTKRELKILDDIMPEMTKRARADDLH 1053


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +2

Query: 134 AAVNYSSLSRSVKLEHFIRQ---LSVCRTMAEKFRLPERYGAGEKS 262
           AA+  +   R+V+ E  +     + +CR +AE  R+  R G G  S
Sbjct: 829 AAIRVARTFRTVRYETAVLPAGLVPICRAVAEDTRVHSRRGTGVSS 874


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 873,944
Number of Sequences: 2352
Number of extensions: 17373
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91786122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)