Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_G03
(862 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical pr... 201 4e-52
Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical pr... 201 6e-52
AL031621-5|CAA20930.1| 437|Caenorhabditis elegans Hypothetical ... 199 2e-51
Z81081-1|CAB03090.1| 464|Caenorhabditis elegans Hypothetical pr... 62 4e-10
AF000195-6|AAO61435.1| 350|Caenorhabditis elegans Hypothetical ... 44 2e-04
AF000195-5|AAC24265.2| 504|Caenorhabditis elegans Hypothetical ... 44 2e-04
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 34 0.15
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 34 0.15
U41510-2|ABP49526.1| 189|Caenorhabditis elegans Hypothetical pr... 31 1.4
AF016684-15|AAB66214.1| 543|Caenorhabditis elegans Hypothetical... 29 3.2
U64600-1|AAK39203.1| 500|Caenorhabditis elegans Hypothetical pr... 29 4.3
U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical p... 28 7.4
U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical p... 28 7.4
AF100656-5|AAF99963.2| 259|Caenorhabditis elegans Hypothetical ... 28 7.4
AC006772-1|AAF60610.3| 326|Caenorhabditis elegans Hypothetical ... 28 7.4
Z82078-2|CAD54160.1| 714|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z82078-1|CAB04944.2| 707|Caenorhabditis elegans Hypothetical pr... 28 9.8
U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical pr... 28 9.8
>Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical
protein R03A10.4a protein.
Length = 441
Score = 201 bits (491), Expect = 4e-52
Identities = 106/224 (47%), Positives = 145/224 (64%), Gaps = 2/224 (0%)
Frame = +2
Query: 197 SVCRTMAEKFRLP-ERYGAGEKSVWVEYIQLAAEYKPAVNLGQGFPDYHAPKHVTEALSQ 373
S CR + P ER S+WVE+ LAAE K AVNLGQGFPD APK VT+ L
Sbjct: 14 SRCRMSSSFAPKPAERTAQHSASIWVEFTTLAAETK-AVNLGQGFPDSPAPKFVTDLLEN 72
Query: 374 IATS-ENPLLHQYTRGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILG 550
++ E HQYTRG+G P LV+ L+K+YS Q+D NE+LVT GAY +LY LG
Sbjct: 73 LSKHPELTAAHQYTRGYGHPMLVDILAKMYSHFYNVQVDPMNEVLVTVGAYLSLYYAFLG 132
Query: 551 HVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFIALKPKPQGDDISSADWVLXEAELASLFN 730
V+ GDEV+IIEP +DCY VK AGGVP + + +G S++ + + A++ S N
Sbjct: 133 WVNKGDEVLIIEPAYDCYYPQVKFAGGVPVPVVMN-LAEG-ATSASQFTIDFADMESKIN 190
Query: 731 NRTKMIIVNTPHNPLGKVFTQRELELIADLCXKHNVLCLSDEVY 862
+TKM+++N PHNP GK+F++ ELE +A++ KHN++ ++DEVY
Sbjct: 191 EKTKMLVINNPHNPTGKLFSRHELEKLAEIAKKHNLIVIADEVY 234
>Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical
protein R03A10.4b protein.
Length = 424
Score = 201 bits (490), Expect = 6e-52
Identities = 102/210 (48%), Positives = 140/210 (66%), Gaps = 1/210 (0%)
Frame = +2
Query: 236 ERYGAGEKSVWVEYIQLAAEYKPAVNLGQGFPDYHAPKHVTEALSQIATS-ENPLLHQYT 412
ER S+WVE+ LAAE K AVNLGQGFPD APK VT+ L ++ E HQYT
Sbjct: 11 ERTAQHSASIWVEFTTLAAETK-AVNLGQGFPDSPAPKFVTDLLENLSKHPELTAAHQYT 69
Query: 413 RGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILGHVDTGDEVIIIEPY 592
RG+G P LV+ L+K+YS Q+D NE+LVT GAY +LY LG V+ GDEV+IIEP
Sbjct: 70 RGYGHPMLVDILAKMYSHFYNVQVDPMNEVLVTVGAYLSLYYAFLGWVNKGDEVLIIEPA 129
Query: 593 FDCYDFMVKCAGGVPRFIALKPKPQGDDISSADWVLXEAELASLFNNRTKMIIVNTPHNP 772
+DCY VK AGGVP + + +G S++ + + A++ S N +TKM+++N PHNP
Sbjct: 130 YDCYYPQVKFAGGVPVPVVMN-LAEG-ATSASQFTIDFADMESKINEKTKMLVINNPHNP 187
Query: 773 LGKVFTQRELELIADLCXKHNVLCLSDEVY 862
GK+F++ ELE +A++ KHN++ ++DEVY
Sbjct: 188 TGKLFSRHELEKLAEIAKKHNLIVIADEVY 217
>AL031621-5|CAA20930.1| 437|Caenorhabditis elegans Hypothetical
protein F28H6.3 protein.
Length = 437
Score = 199 bits (485), Expect = 2e-51
Identities = 104/210 (49%), Positives = 140/210 (66%), Gaps = 1/210 (0%)
Frame = +2
Query: 236 ERYGAGEKSVWVEYIQLAAEYKPAVNLGQGFPDYHAPKHVTEALSQIATSENPL-LHQYT 412
E G ++S+WVE+ +LA E K AV+LGQGFPD APK VTE L IA+ + HQYT
Sbjct: 11 ENVGEHQESIWVEFGKLAIENK-AVSLGQGFPDSPAPKFVTEILKDIASHPEKIESHQYT 69
Query: 413 RGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILGHVDTGDEVIIIEPY 592
R FG P LV LSK+YS G ++A ++IL+T GAY ALY + LG + GDEVIIIEP
Sbjct: 70 RAFGHPDLVGILSKIYSYFYGVNVNATDDILITVGAYNALYYSFLGWISKGDEVIIIEPA 129
Query: 593 FDCYDFMVKCAGGVPRFIALKPKPQGDDISSADWVLXEAELASLFNNRTKMIIVNTPHNP 772
FDCY VK AGG P + +K K +G S++ + + EL N RTKMI++N PHNP
Sbjct: 130 FDCYFPQVKFAGGTPISVVMKLK-EGSK-SASQFTIDFEELEKKINKRTKMIVINNPHNP 187
Query: 773 LGKVFTQRELELIADLCXKHNVLCLSDEVY 862
GK+F++ EL+ IA+L ++++ ++DEVY
Sbjct: 188 TGKLFSREELQHIAELARNYDLIVVADEVY 217
>Z81081-1|CAB03090.1| 464|Caenorhabditis elegans Hypothetical
protein F42D1.2 protein.
Length = 464
Score = 62.5 bits (145), Expect = 4e-10
Identities = 35/123 (28%), Positives = 64/123 (52%)
Frame = +2
Query: 494 NEILVTSGAYEALYSTILGHVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFIALKPKPQGD 673
+++++ SG AL I + G+ +++ P F Y + + P I KP
Sbjct: 139 DDVVLASGCSHALQMAIEAVANAGENILVPHPGFPLYSTLCR-----PHNIV--DKPYKI 191
Query: 674 DISSADWVLXEAELASLFNNRTKMIIVNTPHNPLGKVFTQRELELIADLCXKHNVLCLSD 853
D++ D + + +A++ ++ TK IIVN P NP G VFT+ LE I ++ ++ ++D
Sbjct: 192 DMTGEDVRIDLSYMATIIDDNTKAIIVNNPGNPTGGVFTKEHLEEILAFAHQYKLIIIAD 251
Query: 854 EVY 862
E+Y
Sbjct: 252 EIY 254
>AF000195-6|AAO61435.1| 350|Caenorhabditis elegans Hypothetical
protein C32F10.8b protein.
Length = 350
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Frame = +2
Query: 683 SADWVLXEAELASLFNNRTK-----MIIVNTPHNPLGKVFTQRELELIADLCXKHNVLCL 847
S++W + EAEL FN+ K ++ + P NP G+ ++ +E I K N+ +
Sbjct: 220 SSNWSMDEAELERSFNDHCKEYDIRVLCIINPGNPTGQALSRENIETIIKFAQKKNLFLM 279
Query: 848 SDEVY 862
+DEVY
Sbjct: 280 ADEVY 284
>AF000195-5|AAC24265.2| 504|Caenorhabditis elegans Hypothetical
protein C32F10.8a protein.
Length = 504
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Frame = +2
Query: 683 SADWVLXEAELASLFNNRTK-----MIIVNTPHNPLGKVFTQRELELIADLCXKHNVLCL 847
S++W + EAEL FN+ K ++ + P NP G+ ++ +E I K N+ +
Sbjct: 220 SSNWSMDEAELERSFNDHCKEYDIRVLCIINPGNPTGQALSRENIETIIKFAQKKNLFLM 279
Query: 848 SDEVY 862
+DEVY
Sbjct: 280 ADEVY 284
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +2
Query: 689 DWVLXEAEL---ASLFNNRTKMIIVNTPHNPLGKVFTQRELELIADLCXKHNVLCLSDEV 859
D + EAEL +L N + +IIVN PHNPLG F ++ + + N+ + DEV
Sbjct: 3256 DVKMYEAELNRQIALENTVSGVIIVN-PHNPLGVTFPPEQVISLCNWASSKNLRVVIDEV 3314
Query: 860 Y 862
+
Sbjct: 3315 F 3315
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +2
Query: 689 DWVLXEAEL---ASLFNNRTKMIIVNTPHNPLGKVFTQRELELIADLCXKHNVLCLSDEV 859
D + EAEL +L N + +IIVN PHNPLG F ++ + + N+ + DEV
Sbjct: 3256 DVKMYEAELNRQIALENTVSGVIIVN-PHNPLGVTFPPEQVISLCNWASSKNLRVVIDEV 3314
Query: 860 Y 862
+
Sbjct: 3315 F 3315
>U41510-2|ABP49526.1| 189|Caenorhabditis elegans Hypothetical
protein ZC449.7 protein.
Length = 189
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +2
Query: 599 CYDFMVKCAGGVPRF--IALKPKPQGDDISSADWVLXEAEL-ASLFNNRTKMIIVNT 760
C DF +CA G P+ +A++ K DDI A EL S F N +++ NT
Sbjct: 121 CNDFYYQCAYGEPKTDRMAIRHKLDNDDIEPAAKRHCAGELDYSRFGNERSVVVQNT 177
>AF016684-15|AAB66214.1| 543|Caenorhabditis elegans Hypothetical
protein F45C12.15 protein.
Length = 543
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 656 PKPQGDDIS--SADWVLXEAELASLFNNRTKMIIVNTPHNPLGK 781
PKP+ + + SA L + ++ FN R +++ PHN + K
Sbjct: 106 PKPESESLQKISAQLGLTQQQVTGWFNRRNGTYLISGPHNSVSK 149
>U64600-1|AAK39203.1| 500|Caenorhabditis elegans Hypothetical
protein C33D12.2 protein.
Length = 500
Score = 29.1 bits (62), Expect = 4.3
Identities = 23/66 (34%), Positives = 30/66 (45%)
Frame = +2
Query: 395 LLHQYTRGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILGHVDTGDEV 574
L + TR +LVE L +IG Q D F +L GA E LY + H T E
Sbjct: 287 LKEELTRSLERNKLVEMLKLSEKSIIGGQSDEFKMVL---GALE-LYDKTVAHAMTRYED 342
Query: 575 IIIEPY 592
I + P+
Sbjct: 343 IFMLPH 348
>U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical
protein C16A3.10a protein.
Length = 422
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 800 LELIADLCXKHNVLCLSDEV 859
L+ ++DLC K+NVL ++DEV
Sbjct: 227 LKGVSDLCKKYNVLFITDEV 246
>U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical
protein C16A3.10b protein.
Length = 357
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 800 LELIADLCXKHNVLCLSDEV 859
L+ ++DLC K+NVL ++DEV
Sbjct: 162 LKGVSDLCKKYNVLFITDEV 181
>AF100656-5|AAF99963.2| 259|Caenorhabditis elegans Hypothetical
protein F49F1.6 protein.
Length = 259
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -3
Query: 779 CPADCGACSR*SF*FGC*RAKLAPPRXKPNP 687
CP CG C+ G + LAPPR P P
Sbjct: 119 CPKRCGVCTS-----GASNSTLAPPRPSPTP 144
>AC006772-1|AAF60610.3| 326|Caenorhabditis elegans Hypothetical
protein Y46D2A.2 protein.
Length = 326
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 629 GVPRFIALKPKPQGDDISSADWVLXEAELASLFNNRTKMIIVNT 760
G+ F+ L K Q DD + + +V+ +A+ S + ++I+NT
Sbjct: 100 GLTGFLYLTTKKQADDPAFSVYVIKQAQTVSTTQPNSTVVILNT 143
>Z82078-2|CAD54160.1| 714|Caenorhabditis elegans Hypothetical
protein W09D6.1b protein.
Length = 714
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 179 HF-IRQLSVCRTMAEKFRLPERYGAGEKSVWVEYIQL 286
HF I ++ CR+ K R+ YG E S W Y ++
Sbjct: 242 HFPISSINSCRSPENKTRVFNVYGVTEVSCWASYFEV 278
>Z82078-1|CAB04944.2| 707|Caenorhabditis elegans Hypothetical
protein W09D6.1a protein.
Length = 707
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 179 HF-IRQLSVCRTMAEKFRLPERYGAGEKSVWVEYIQL 286
HF I ++ CR+ K R+ YG E S W Y ++
Sbjct: 242 HFPISSINSCRSPENKTRVFNVYGVTEVSCWASYFEV 278
>U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical
protein T01C8.5 protein.
Length = 408
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 734 RTKMIIVNTPHNPLGKVFTQRELELIADLCXKHNVLCLSDEVY 862
++ +I+ HNP G TQ + +L+A++ + N+ D Y
Sbjct: 176 KSVIILHGCAHNPTGMDPTQEQWKLVAEVIKRKNLFTFFDIAY 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,059,676
Number of Sequences: 27780
Number of extensions: 395691
Number of successful extensions: 842
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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