Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_G02
         (784 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    24   1.6  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    24   1.6  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           24   1.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   6.4  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    22   6.4  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   8.4  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   8.4  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   8.4  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   8.4  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 642 QFTSNNFSCKYKPVPGTPSGFY 577
           Q+ +NNFS +   V   P+ FY
Sbjct: 148 QYDNNNFSAEENSVSEPPANFY 169


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 642 QFTSNNFSCKYKPVPGTPSGFY 577
           Q+ +NNFS +   V   P+ FY
Sbjct: 148 QYDNNNFSAEENSVSEPPANFY 169


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 642 QFTSNNFSCKYKPVPGTPSGFY 577
           Q+ +NNFS +   V   P+ FY
Sbjct: 148 QYDNNNFSAEENSVSEPPANFY 169


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 581 KPLGVPGTGLYLQEKLLEVN*KHQQELTKNHYKLNGY 691
           K   +  + L   E+L +   K++ E TKNHY  N Y
Sbjct: 316 KETNLEKSNLNHNEQLRKYLCKNEDE-TKNHYSKNTY 351


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 581 KPLGVPGTGLYLQEKLLEVN*KHQQELTKNHYKLNGY 691
           K   +  + L   E+L +   K++ E TKNHY  N Y
Sbjct: 208 KETNLEKSNLNHNEQLRKYLCKNEDE-TKNHYSKNTY 243


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 186 LKGNLCKYVARSK 224
           L GN+C YV R K
Sbjct: 161 LIGNVCSYVVRDK 173


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -1

Query: 118 NSHDQIKLGHINQ 80
           N H+++KL H++Q
Sbjct: 120 NPHEEVKLQHLHQ 132


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 624 FSCKYKPVPGTPSGFYN 574
           F  KY  V GTP  F+N
Sbjct: 157 FQLKYYQVTGTPIIFHN 173


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 624 FSCKYKPVPGTPSGFYN 574
           F  KY  V GTP  F+N
Sbjct: 157 FQLKYYQVTGTPIIFHN 173


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 412 EFNEVLMMQEAKESCAGKWYLP 477
           E++     Q+ + S  G W+LP
Sbjct: 217 EYSPTFTQQQTQYSQYGSWFLP 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,920
Number of Sequences: 336
Number of extensions: 3483
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)