Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_G02
(784 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0215 - 21621889-21621949,21622275-21622333,21622442-216225... 46 4e-05
02_05_1142 - 34391144-34391590,34391715-34391904,34392058-343921... 44 1e-04
06_03_0848 - 25334701-25334949,25335076-25335184,25335667-253357... 44 2e-04
04_04_0703 + 27398358-27398466,27398549-27398859,27399044-273991... 41 0.001
02_02_0139 + 7122880-7122979,7123328-7123560,7123961-7124032,712... 38 0.009
06_01_0296 - 2156895-2157160,2157435-2157527,2157932-2158031,215... 37 0.021
07_01_0793 - 6169661-6169936,6170942-6171025,6171473-6171590,617... 36 0.027
03_06_0406 - 33703767-33704045,33705167-33705226,33705295-337053... 36 0.027
04_04_1653 + 35070026-35070064,35070358-35070408,35070490-350705... 35 0.084
02_05_0435 - 28958422-28958665,28959328-28959462,28960056-289602... 33 0.19
06_01_0206 - 1573796-1574071,1574580-1574678,1574859-1574951,157... 32 0.59
02_05_0651 + 30644241-30644615,30644751-30644858 31 1.4
06_02_0036 - 10844876-10846173,10846490-10847012 30 1.8
01_03_0103 - 12567986-12568141,12568307-12568442,12568751-125688... 30 2.4
07_03_0921 + 22606287-22606490,22607139-22607210,22607433-226075... 29 4.2
04_04_1133 - 31132835-31132942,31133046-31133115,31133201-311333... 29 4.2
11_01_0553 - 4368233-4368320,4368427-4368514,4368595-4368668,436... 29 5.5
06_01_1033 - 8080179-8080685 29 5.5
04_03_0797 + 19744815-19745030,19745190-19745273,19745375-197454... 28 9.6
>09_06_0215 -
21621889-21621949,21622275-21622333,21622442-21622582,
21622669-21622804,21623266-21623342,21623594-21623725,
21624915-21624938,21626147-21626365,21626401-21626718
Length = 388
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +1
Query: 376 NVTYVVACVIINEFNEVLMMQEAKESCAGKWYLPAGRMEKGETIVQAAVREVLEE 540
N VV C++ ++ N+VL+ + E G W LPAG +E GE+ + A RE LEE
Sbjct: 228 NPKMVVGCLVEHD-NKVLLCRRKIEPAYGLWTLPAGYLEVGESAAEGASRETLEE 281
>02_05_1142 -
34391144-34391590,34391715-34391904,34392058-34392128,
34392403-34392515,34392656-34392749,34392843-34392908,
34393120-34393282,34393441-34393547,34393918-34394115,
34394204-34394329,34394800-34394904,34395056-34395098,
34395334-34395391,34395479-34395659,34395751-34395917,
34396010-34396249,34396341-34396781,34397147-34397272,
34397457-34397561,34397935-34398002,34398169-34398272,
34398856-34399008,34399472-34399570,34399919-34400046,
34400149-34400300,34400423-34400502
Length = 1274
Score = 44.0 bits (99), Expect = 1e-04
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Frame = +1
Query: 388 VVACVIINEFNEVLMMQEAKESCAGKWYLPAGRMEKGETIVQAAVREVLEETGLQCDLKT 567
V +I+++ E ++ + +S A W P G+ K E AVREVLEETG CD+
Sbjct: 108 VCGAIILDDTYEKCLLVKGWKSSAS-WSFPRGKRSKDEEDHTCAVREVLEETG--CDVSK 164
Query: 568 LLVVE--TAGGSWYR----FVLTGEIIGGELKTPARADKESLQAKWISSLXEITLRANDI 729
LL +E W + +++TG + G+ + KE + W ++ E+ +D
Sbjct: 165 LLKLEDYIEVSMWQQRVRLYIITG--VKGDTVFAPQTKKEISEISW-HNIDELLPAGDDA 221
Query: 730 IHL-IEKAKLY 759
I + KLY
Sbjct: 222 ISRGVNGMKLY 232
>06_03_0848 -
25334701-25334949,25335076-25335184,25335667-25335701,
25335793-25335843,25335941-25336018,25336214-25336351,
25336664-25336729,25337387-25337572
Length = 303
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 391 VACVIINEFNEVLMMQEAKESCAGK--WYLPAGRMEKGETIVQAAVREVLEETGLQCDLK 564
V ++N+ EVL +QE G W P G +E GE I AVREV EETG+ +
Sbjct: 120 VGAFVMNDKREVLAVQEKSGVLRGLGVWKFPTGVVEPGEDINLGAVREVKEETGIDTEFV 179
Query: 565 TLL 573
+L
Sbjct: 180 EVL 182
>04_04_0703 +
27398358-27398466,27398549-27398859,27399044-27399109,
27399196-27399258,27399304-27399444,27399535-27399612,
27399688-27399738,27399829-27399863,27399982-27400090,
27400235-27400441
Length = 389
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 403 IINEFNEVLMMQE--AKESCAGKWYLPAGRMEKGETIVQAAVREVLEETGLQCD 558
+IN+ EVL++QE S G W LP G + E I A REV EETG+ +
Sbjct: 224 VINDQMEVLVVQEKYCGSSLDGAWKLPTGFILASEEIFTGATREVKEETGVDTE 277
>02_02_0139 +
7122880-7122979,7123328-7123560,7123961-7124032,
7124257-7124334,7124529-7124579,7124654-7124703,
7124807-7124915,7125023-7125223
Length = 297
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +1
Query: 424 VLMMQEAK--ESCAGKWYLPAGRMEKGETIVQAAVREVLEETG 546
VL+++E K C+ W +P G ++K E + A+REV EETG
Sbjct: 136 VLVVKEGKCPSHCSDIWKIPTGFIDKFEDLFSGAIREVREETG 178
>06_01_0296 -
2156895-2157160,2157435-2157527,2157932-2158031,
2158634-2158738,2158832-2158972,2159056-2159568
Length = 405
Score = 36.7 bits (81), Expect = 0.021
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +1
Query: 388 VVACVIINEFNEVLMMQEAKESCAGKWYLPAGRMEKGETIVQAAVREVLEETGLQ 552
VV ++I++ N+ ++ W AG +E GE++ +A RE EETG+Q
Sbjct: 219 VVIMLVIDKENDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIQ 273
>07_01_0793 -
6169661-6169936,6170942-6171025,6171473-6171590,
6172917-6172987
Length = 182
Score = 36.3 bits (80), Expect = 0.027
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = +1
Query: 421 EVLMMQEAKESCAGKWYLPAGRMEKGETIVQAAVREVLEETGLQCDLKTLL 573
EVLM+ +S +G + P G E ET+ +AA RE +EE G++ DL LL
Sbjct: 47 EVLMINS--QSGSGLLF-PKGGWENDETVEEAAAREAIEEAGVRGDLVQLL 94
>03_06_0406 -
33703767-33704045,33705167-33705226,33705295-33705378,
33705991-33706093,33706427-33706487,33706993-33707026
Length = 206
Score = 36.3 bits (80), Expect = 0.027
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = +1
Query: 421 EVLMMQEAKESCAGKWYLPAGRMEKGETIVQAAVREVLEETGLQCDLKTLLVVET 585
EVLM+ +S G + P G E ET+ QAA RE +EE G++ D+ V ET
Sbjct: 50 EVLMINS--QSGPGLLF-PKGGWENDETVEQAAAREAVEEAGVRGDIVACQVSET 101
>04_04_1653 +
35070026-35070064,35070358-35070408,35070490-35070582,
35070758-35070855,35072437-35072551,35072628-35072720
Length = 162
Score = 34.7 bits (76), Expect = 0.084
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 424 VLMMQEAKESCAGKWYLPAGRMEKGETIVQAAVREVLEETGL 549
+L+ ++ A W +P G ++ GE +AA RE+ EETG+
Sbjct: 12 ILIFTASRIDIANTWQMPQGGIDAGEDPREAAFRELREETGV 53
>02_05_0435 -
28958422-28958665,28959328-28959462,28960056-28960211,
28960287-28961092,28961177-28961254,28961809-28961883,
28962127-28962215,28962735-28962843,28963007-28963086,
28963739-28963794,28963876-28963958,28964049-28964118,
28964200-28964309,28964395-28964548,28965183-28965382,
28966175-28966348,28969080-28969277,28970564-28970791
Length = 1014
Score = 33.5 bits (73), Expect = 0.19
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 421 EVLMMQEAKESCAGKWYLPAGRMEK 495
EV +++E+K+ G+WY P GR++K
Sbjct: 447 EVFILRESKKPKVGRWYFPRGRLDK 471
>06_01_0206 -
1573796-1574071,1574580-1574678,1574859-1574951,
1575036-1575128,1575638-1575715,1575833-1576051
Length = 285
Score = 31.9 bits (69), Expect = 0.59
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Frame = +1
Query: 472 LPAGRM--EKGETIVQAAVREVLEETGLQCDLKTLL 573
LPAG + EKG+ V AVREV EETG++ +L+ ++
Sbjct: 142 LPAGMLDDEKGD-FVGTAVREVEEETGIKLNLEDMI 176
>02_05_0651 + 30644241-30644615,30644751-30644858
Length = 160
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +1
Query: 475 PAGRMEKGETIVQAAVREVLEETGLQCDLKTLLVVETAGGSWY 603
P G E E++ +AA RE LEE G++ D ET+ G WY
Sbjct: 53 PKGGWELDESMDEAARREALEEAGVRGD------TETSLGCWY 89
>06_02_0036 - 10844876-10846173,10846490-10847012
Length = 606
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = -3
Query: 665 LSALAGVFNSPPIISPVSTNLYQEPPAVSTTSKVLRSH*RPVSSNTSLTAA 513
LS + G+ S SP+ N Q S+T+KVL SH +S S TAA
Sbjct: 553 LSCIVGLIMSFVDYSPIQPNKAQLERQQSSTNKVLGSHRTEQASAASATAA 603
>01_03_0103 -
12567986-12568141,12568307-12568442,12568751-12568824,
12568932-12569175,12569480-12569766,12570618-12571103,
12571348-12571459,12571540-12571745,12573071-12573276,
12573831-12574162,12574284-12574825,12574967-12576308,
12576386-12576457,12578438-12578505,12579011-12580174
Length = 1808
Score = 29.9 bits (64), Expect = 2.4
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +1
Query: 202 VNMSRE--VNNSLNLLIEGLGLDSEGKDFCDFT-IADQNSVAESQGITPTTPSNFKPVLG 372
+N++ E V NSLNLL E + S G DF +FT ++ N + S + N PVLG
Sbjct: 494 LNLTTEESVMNSLNLLSENKIVGSGGLDFLNFTGFSEFNDIHPSGHV---RHPNILPVLG 550
Query: 373 GNVTY 387
TY
Sbjct: 551 IVETY 555
>07_03_0921 +
22606287-22606490,22607139-22607210,22607433-22607522,
22607694-22607736,22608151-22608257,22608848-22608943,
22609543-22609733,22609819-22609888,22609992-22610099
Length = 326
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +1
Query: 628 IGGELKTPARADKESLQAKWISSLXEITLRANDIIHLIEKAKLYKQTKPXNW 783
+GG + PA+ K + + + L + LR N ++ L +K ++++ P W
Sbjct: 30 VGGGVGQPAKDMKMASAEQLVLDLCDPELRENALLELSKKREIFQDLAPLLW 81
>04_04_1133 -
31132835-31132942,31133046-31133115,31133201-31133391,
31133991-31134086,31134676-31134782,31135197-31135239,
31135411-31135500,31135723-31135794,31136443-31136646
Length = 326
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +1
Query: 628 IGGELKTPARADKESLQAKWISSLXEITLRANDIIHLIEKAKLYKQTKPXNW 783
+GG + PA+ K + + + L + LR N ++ L +K ++++ P W
Sbjct: 30 VGGGVGQPAKDMKMASAEQLVLDLCDPELRENALLELSKKREIFQDLAPLLW 81
>11_01_0553 -
4368233-4368320,4368427-4368514,4368595-4368668,
4369000-4369160,4369233-4369322,4369406-4369480,
4369569-4369640,4369719-4369891,4369964-4370078,
4370274-4370387,4370582-4370661,4370755-4370842,
4370941-4370997,4371111-4371176,4371254-4371349,
4371459-4371566,4371941-4372039,4372108-4372227,
4372399-4372437,4372940-4373026,4373276-4373347,
4373443-4373509,4374455-4374546,4374631-4374708,
4374785-4374922,4375029-4375164,4375306-4375468,
4375690-4375849,4375950-4376056,4376149-4376259,
4377850-4378159
Length = 1107
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 451 SCAGKWYLPAGRMEKGETIVQAAVREVLE-ETGLQCDLKTLLVVETAGGSW 600
SC G + P G +E+G TI + L E+ + L+ ++ GG+W
Sbjct: 227 SCRGLHFAPIGILERGITIEGLGSKSFLTYESNILFALRFMIDCNIVGGNW 277
>06_01_1033 - 8080179-8080685
Length = 168
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +1
Query: 421 EVLMMQEAKE-SCAGKWYL-PAGRMEKGETIVQAAVREVLEETGL 549
EVL++ K+ + AG + P G E E++ +AA RE LEE G+
Sbjct: 41 EVLVISSQKKGAAAGDVVMFPKGGWELDESVDEAARREALEEAGV 85
>04_03_0797 +
19744815-19745030,19745190-19745273,19745375-19745473,
19745588-19745695,19747332-19747700
Length = 291
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 475 PAGRMEKGETIVQAAVREVLEETGLQCDLKTL 570
P G E E + +AA RE +EE G++ ++ +
Sbjct: 71 PKGGWEDDEDVYEAACREAMEEAGVKGNINVM 102
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,844,789
Number of Sequences: 37544
Number of extensions: 332873
Number of successful extensions: 871
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -