Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_G02
(784 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82053-2|CAB04835.1| 365|Caenorhabditis elegans Hypothetical pr... 128 3e-30
AC084268-2|AAL16324.1| 150|Caenorhabditis elegans Hypothetical ... 39 0.005
AF067946-2|AAC17685.1| 223|Caenorhabditis elegans Nudix family ... 37 0.019
U55855-1|AAA98017.1| 188|Caenorhabditis elegans Nudix family pr... 36 0.043
Z68748-2|CAA92955.3| 374|Caenorhabditis elegans Hypothetical pr... 33 0.23
AF305937-1|AAG37064.1| 348|Caenorhabditis elegans NADH pyrophos... 33 0.23
Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical pr... 31 0.93
DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping... 31 0.93
AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical ... 31 0.93
AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical ... 31 0.93
U41532-7|ABD63237.1| 769|Caenorhabditis elegans Hypothetical pr... 29 3.7
U41532-6|AAF99908.2| 812|Caenorhabditis elegans Hypothetical pr... 29 3.7
U40029-6|AAA81126.1| 490|Caenorhabditis elegans Proteasome regu... 29 5.0
U23484-4|AAC46768.2| 260|Caenorhabditis elegans Nudix family pr... 29 5.0
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 5.0
AL032625-2|CAB63351.1| 138|Caenorhabditis elegans Hypothetical ... 29 5.0
Z79753-7|CAB02085.2| 448|Caenorhabditis elegans Hypothetical pr... 28 8.7
AF000195-2|AAC24267.1| 316|Caenorhabditis elegans Hypothetical ... 28 8.7
>Z82053-2|CAB04835.1| 365|Caenorhabditis elegans Hypothetical
protein T26E3.2 protein.
Length = 365
Score = 128 bits (310), Expect = 3e-30
Identities = 66/143 (46%), Positives = 89/143 (62%), Gaps = 7/143 (4%)
Frame = +1
Query: 367 LGGNVTYVVACVIIN---EFNEVLMMQEAKESCAGKWYLPAGRMEKGETIVQAAVREVLE 537
L NV YV A +I+ + EVL++QEAK+SC GKWY+PAGR+E GETI +A VREV E
Sbjct: 68 LHDNVNYVAAAIILRNQGDDTEVLLIQEAKKSCRGKWYMPAGRVEAGETIEEAVVREVKE 127
Query: 538 ETGLQCDLKTLLVVETAGGSWYRFVLTGEIIGGELKTPARADKESLQAKWIS----SLXE 705
ETG CD+ LL ++ G WYR+ I GG+LKT D+ESL A+W + +
Sbjct: 128 ETGYSCDVVELLSLQVQGSGWYRYAFYCNITGGDLKT--EPDQESLAAEWYNIKDLKANK 185
Query: 706 ITLRANDIIHLIEKAKLYKQTKP 774
+ LR D I L+++A Y+ P
Sbjct: 186 VQLRGRDFIRLVDEAVTYRTHGP 208
>AC084268-2|AAL16324.1| 150|Caenorhabditis elegans Hypothetical
protein Y92H12BL.5 protein.
Length = 150
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +1
Query: 424 VLMMQEAKESCAGKWYLPAGRMEKGETIVQAAVREVLEETGLQCDL 561
VL++ K+ GKW +P G +EK E +AA RE++EE G++ +
Sbjct: 41 VLLVSGGKDG--GKWVVPGGGIEKDECAEEAAHRELMEEAGVRATI 84
>AF067946-2|AAC17685.1| 223|Caenorhabditis elegans Nudix family
protein 2 protein.
Length = 223
Score = 36.7 bits (81), Expect = 0.019
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +1
Query: 328 GITPTTPSNFKPV-LGGNVTYVVACVIINEFNEVLMMQEAKESCAGKWYL--PAGRMEKG 498
G+ + N KPV + ++A V ++++++ + C GK L PAG ++ G
Sbjct: 58 GVWQSVHRNTKPVEASADGVSIIARVRKQGKLYIVLVKQYRIPC-GKLCLELPAGLIDAG 116
Query: 499 ETIVQAAVREVLEETG 546
ET QAA+RE+ EETG
Sbjct: 117 ETAQQAAIRELKEETG 132
>U55855-1|AAA98017.1| 188|Caenorhabditis elegans Nudix family
protein 3 protein.
Length = 188
Score = 35.5 bits (78), Expect = 0.043
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +1
Query: 379 VTYVVACVIINEFNEVLMMQEA--KESCAGKWYLPAGRMEKGETIVQAAVREVLEETGLQ 552
++ ++ V ++ + VL+ + + S G+ P GRM+ GET + A+RE EE G+
Sbjct: 1 MSVLIPLVTVDGRDSVLLTKRSIHLRSHRGEVCFPGGRMDPGETTTETALRETFEEIGVN 60
Query: 553 CD 558
+
Sbjct: 61 AE 62
>Z68748-2|CAA92955.3| 374|Caenorhabditis elegans Hypothetical
protein F13H10.2 protein.
Length = 374
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 400 VIINEFNEVLMMQEAKESCAGKWYLPAGRMEKGETIVQAAVREVLEETGLQCD 558
+I + NE ++ + S G + AG GE++ + A RE+ EE G++ D
Sbjct: 217 LITDPTNEHALLVRHRGSAGGVFTAVAGFAHSGESMAECARREIAEEVGIEVD 269
>AF305937-1|AAG37064.1| 348|Caenorhabditis elegans NADH
pyrophosphatase protein.
Length = 348
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 400 VIINEFNEVLMMQEAKESCAGKWYLPAGRMEKGETIVQAAVREVLEETGLQCD 558
+I + NE ++ + S G + AG GE++ + A RE+ EE G++ D
Sbjct: 191 LITDPTNEHALLVRHRGSAGGVFTAVAGFAHSGESMAECARREIAEEVGIEVD 243
>Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 31.1 bits (67), Expect = 0.93
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 394 ACVIINEFNEVLMMQEAKESCAGK-WYLPAGRMEKGETIVQAAVREVLEETG 546
A ++ E + V+++Q GK W P G++ + E AA+RE EETG
Sbjct: 245 AILVDPEMDHVVLVQSY--FAKGKNWGFPKGKINQAEPPRDAAIRETFEETG 294
>Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 31.1 bits (67), Expect = 0.93
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 394 ACVIINEFNEVLMMQEAKESCAGK-WYLPAGRMEKGETIVQAAVREVLEETG 546
A ++ E + V+++Q GK W P G++ + E AA+RE EETG
Sbjct: 268 AILVDPEMDHVVLVQSY--FAKGKNWGFPKGKINQAEPPRDAAIRETFEETG 317
>DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping
protein protein.
Length = 770
Score = 31.1 bits (67), Expect = 0.93
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 394 ACVIINEFNEVLMMQEAKESCAGK-WYLPAGRMEKGETIVQAAVREVLEETG 546
A ++ E + V+++Q GK W P G++ + E AA+RE EETG
Sbjct: 229 AILVDPEMDHVVLVQSY--FAKGKNWGFPKGKINQAEPPRDAAIRETFEETG 278
>AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 31.1 bits (67), Expect = 0.93
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 394 ACVIINEFNEVLMMQEAKESCAGK-WYLPAGRMEKGETIVQAAVREVLEETG 546
A ++ E + V+++Q GK W P G++ + E AA+RE EETG
Sbjct: 245 AILVDPEMDHVVLVQSY--FAKGKNWGFPKGKINQAEPPRDAAIRETFEETG 294
>AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 31.1 bits (67), Expect = 0.93
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 394 ACVIINEFNEVLMMQEAKESCAGK-WYLPAGRMEKGETIVQAAVREVLEETG 546
A ++ E + V+++Q GK W P G++ + E AA+RE EETG
Sbjct: 268 AILVDPEMDHVVLVQSY--FAKGKNWGFPKGKINQAEPPRDAAIRETFEETG 317
>U41532-7|ABD63237.1| 769|Caenorhabditis elegans Hypothetical
protein F11D5.1c protein.
Length = 769
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = -3
Query: 698 KLDIHLACNDSLSALAGVFN----SPPIISPVSTNLYQEPPAVSTTSKVLRSH*RPVSSN 531
K + ++ D SA+ VF SP + SP+S+NL+ +P S T S PV+S+
Sbjct: 367 KTVVDISSTDRTSAVNSVFKYDNLSPAVKSPISSNLW-KPTINSPTMSTTESTISPVASS 425
>U41532-6|AAF99908.2| 812|Caenorhabditis elegans Hypothetical
protein F11D5.1a protein.
Length = 812
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = -3
Query: 698 KLDIHLACNDSLSALAGVFN----SPPIISPVSTNLYQEPPAVSTTSKVLRSH*RPVSSN 531
K + ++ D SA+ VF SP + SP+S+NL+ +P S T S PV+S+
Sbjct: 410 KTVVDISSTDRTSAVNSVFKYDNLSPAVKSPISSNLW-KPTINSPTMSTTESTISPVASS 468
>U40029-6|AAA81126.1| 490|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 5 protein.
Length = 490
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 8/57 (14%)
Frame = +1
Query: 610 VLTGEIIGGELKTPAR--------ADKESLQAKWISSLXEITLRANDIIHLIEKAKL 756
++TG+I G +L P+R A+ E L W S++ ++T N + HLI K ++
Sbjct: 423 IVTGQITGAKLHRPSRIVNLRLKKANVEQLDV-WASNVHKLTDTLNKVSHLILKEQM 478
>U23484-4|AAC46768.2| 260|Caenorhabditis elegans Nudix family
protein 6 protein.
Length = 260
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 460 GKWYLPAGRMEKGETIVQAAVREVLEE 540
G+W +P G ++ GE + Q RE EE
Sbjct: 141 GEWAIPGGMVDAGEHVSQTLRREFAEE 167
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = -3
Query: 641 NSPPIISPVSTNLYQEPPAVSTTSKVLRSH*RPVSSNTSLTAACTIVSPFSILPAG 474
++P +SP + PP STT + SS S TA+ T+ SP S P G
Sbjct: 463 STPSFLSPTDSLTATTPPG-STTQAASTTESAMASSIESPTASVTVSSPKSTEPLG 517
>AL032625-2|CAB63351.1| 138|Caenorhabditis elegans Hypothetical
protein Y37H9A.6 protein.
Length = 138
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 466 WYLPAGRMEKGETIVQAAVREVLEETGLQCDLKTL 570
W P G ++ GE QAA+RE EE + + T+
Sbjct: 32 WTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTI 66
>Z79753-7|CAB02085.2| 448|Caenorhabditis elegans Hypothetical
protein F20G2.5 protein.
Length = 448
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 259 LDSEGKDFCDFTIADQNSVAESQGITPTTPSNFK 360
+DS D I DQN V +S P TP+ F+
Sbjct: 223 VDSMETYIIDLNIVDQNVVGQSISFKPLTPTQFQ 256
>AF000195-2|AAC24267.1| 316|Caenorhabditis elegans Hypothetical
protein C32F10.4 protein.
Length = 316
Score = 27.9 bits (59), Expect = 8.7
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = -3
Query: 698 KLDIHLACNDSLSALAGVFNSPPIISPVSTNLYQEPPAVSTTSKVLRSH*RPVSSNTSLT 519
+L H A N ++ + SP + P PP S T+ + + +PV S +S T
Sbjct: 192 RLPQHQASNYNVQYIVPTPMSPSGMPPPPRYTAYAPPMSSQTAPPIPTKQQPVDSESSTT 251
Query: 518 AACTIVSPFSILP 480
+A T F P
Sbjct: 252 SASTRSGSFVSTP 264
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,194,336
Number of Sequences: 27780
Number of extensions: 312621
Number of successful extensions: 811
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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