Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_F24
(637 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical pr... 238 2e-63
U23486-3|AAL38955.1| 529|Caenorhabditis elegans Hypothetical pr... 29 3.7
U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z78420-2|CAB01710.3| 738|Caenorhabditis elegans Hypothetical pr... 28 6.4
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 28 6.4
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 28 6.4
Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z83217-3|CAB05682.3| 610|Caenorhabditis elegans Hypothetical pr... 27 8.5
AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily a... 27 8.5
>Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical
protein ZC434.2 protein.
Length = 194
Score = 238 bits (583), Expect = 2e-63
Identities = 109/186 (58%), Positives = 146/186 (78%), Gaps = 1/186 (0%)
Frame = +1
Query: 37 KIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMP 216
K++K+ G E +SQAL++LETN D+++QL+ELYI KE+EL NK +IIIYVP+P
Sbjct: 7 KLLKSDGKVVSEIEKQVSQALIDLETNDDVQSQLKELYIVGVKEVELGNKSAIIIYVPVP 66
Query: 217 KLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVA-NKQKRPRSRTLTSVY 393
+LKAF KI LVRELEKKF G+ ++ + R+ILPKP ++ KQKRPRSRTLT+V+
Sbjct: 67 QLKAFHKIHPALVRELEKKFGGRDILILAKRRILPKPQRGSKARPQKQKRPRSRTLTAVH 126
Query: 394 DAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVT 573
DA L++LV+PAE+VG+RIRVKLDG ++ KVHLDK+ QT + HK+ F SVY+KLTG++VT
Sbjct: 127 DAWLDELVYPAEVVGRRIRVKLDGKKVYKVHLDKSHQTNVGHKIGVFASVYRKLTGKDVT 186
Query: 574 FEFPEP 591
FEFP+P
Sbjct: 187 FEFPDP 192
>U23486-3|AAL38955.1| 529|Caenorhabditis elegans Hypothetical
protein F07F6.4 protein.
Length = 529
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 101 SNSKPTPTSKPNFGSFTLQKLKKLNYTIRSRSSSMCR 211
S+SK T F SF Q ++K YT S SSS R
Sbjct: 376 SSSKKTTKEDDFFDSFETQPVQKSRYTASSSSSSTSR 412
>U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical
protein C27D6.1 protein.
Length = 782
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +1
Query: 22 VKMSTKIIKASGAEADSFE---TSISQALVELETNSDLKAQLRELYITKAKEIELHNKKS 192
+K + K K AEA+ ++ T S+ L ELE Q +E + K++E+E+ NK+
Sbjct: 242 LKANEKARKEIEAEAEKWKDRATRNSKRLPELELELAETVQAKEEWQVKSQEMEIQNKQL 301
Query: 193 I 195
+
Sbjct: 302 V 302
>Z78420-2|CAB01710.3| 738|Caenorhabditis elegans Hypothetical
protein F45H11.3 protein.
Length = 738
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -2
Query: 123 VGVGFEFDQRLRDRGLEGIRLSTACFDDL 37
V VGFE RLRD+GL +LS +D L
Sbjct: 522 VEVGFENWIRLRDKGLSHSQLSCQLYDTL 550
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 451 VKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEF 582
VK+ GS +D Q+T K+DTF+ +++ R + + F
Sbjct: 379 VKIMGSDYEVDTIDVYNQSTYSMKLDTFRKLFRDTKNRPLLYNF 422
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 451 VKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEF 582
VK+ GS +D Q+T K+DTF+ +++ R + + F
Sbjct: 392 VKIMGSDYEVDTIDVYNQSTYSMKLDTFRKLFRDTKNRPLLYNF 435
>Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical protein
F31C3.3 protein.
Length = 2029
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 108 EFDQRLRDRGLEGIRLSTACFDDLRTHLDNFSGR 7
EFD++ +G+E +R CF+D L G+
Sbjct: 1717 EFDEKSAKKGMEVVRRFEVCFEDCTWKLTESDGQ 1750
>Z83217-3|CAB05682.3| 610|Caenorhabditis elegans Hypothetical
protein C10C6.5 protein.
Length = 610
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -3
Query: 116 LVSSSTSACEIEVSKESASAPLALMIF--VLILTTLAGG 6
L+ S+SAC I +S S S P+A+ +L L +L GG
Sbjct: 479 LIEQSSSACGIMISCISPSLPIAMSTAGPMLTLLSLTGG 517
>AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily
assigned gene nameprotein 168 protein.
Length = 1347
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 4 FPPAKVVKMSTKIIKASGAEADSFETSISQALVELETN 117
+PPA V K++ + IK + + F+TSI L E+N
Sbjct: 150 YPPADVTKVTVQEIKNNETPRNFFKTSIINNLEVSESN 187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,828,543
Number of Sequences: 27780
Number of extensions: 282823
Number of successful extensions: 862
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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