Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_F22
         (618 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    28   0.28 
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    27   0.64 
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    26   1.1  
AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein pro...    26   1.1  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   2.0  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   4.5  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   7.9  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   7.9  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.9 bits (59), Expect = 0.28
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +1

Query: 181 PLVAPAVYNAALIAPGVVPAVAALSQAPHSPAVVLDAVNGVPLDTPEV 324
           P +AP V ++ + AP   P+    ++    P   +  V  VPL TP V
Sbjct: 88  PSLAPVVPSSVVTAPPARPSQPPTTRFAPEPRAEVKFVPSVPLKTPPV 135


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = -1

Query: 198  SRSYQRRSMDHTGAVLGQRTNSRHDSAVGQRSHHTGLGDGGREN 67
            SRSY  + M   GA   ++ +S  ++  G++S + GLG GGR N
Sbjct: 1162 SRSYNGQ-MGGGGA--NRKRSSATNNGGGRQSSNNGLGAGGRTN 1202


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +1

Query: 184 LVAPAVYNAALIAPGVVPAVAALSQAPH--SPAVVLDAVNGVP 306
           L  P  YN  L+APG    ++ + +  +   P+ +L  +N +P
Sbjct: 548 LFTPNTYNKFLVAPGGDHLISLIDEISYVSPPSPMLSQINDIP 590


>AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein
           protein.
          Length = 182

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = -1

Query: 339 GAGSDDLRSVEGDTVNSIQDDSRR--VRGLREGGD 241
           GAGSDD  S   D     +DD+      G  EGGD
Sbjct: 114 GAGSDDAVSGADDETEESKDDAEEDSEEGGEEGGD 148


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -3

Query: 478 QRELNRRRLQGKSRR-GERRQSCRPRERQQTACGGGGSQTELLPGSERRGQRRPQE 314
           QR+L +++ Q + ++ GER     P+ RQQ        Q +  P  +R  Q+RPQ+
Sbjct: 432 QRQLQQQQQQQQQQQQGERYVP--PQLRQQRQQQQPQQQQQQRPQQQRPQQQRPQQ 485



 Score = 24.2 bits (50), Expect = 3.4
 Identities = 13/55 (23%), Positives = 29/55 (52%)
 Frame = -3

Query: 478 QRELNRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERRGQRRPQE 314
           QR+  + + Q + ++ +R+Q  R ++RQQ        Q +     ++R Q++ Q+
Sbjct: 305 QRQQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQ 359


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -3

Query: 478 QRELNRRRLQGKSRRGERRQ 419
           QREL R+R +G+S  G +++
Sbjct: 38  QRELERKRAEGESDFGRKKK 57


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -3

Query: 472 ELNRRRLQGKSRRGERRQSCRPRERQQ 392
           E+ RRR +GK+  G+ R   +P+++QQ
Sbjct: 264 EVVRRRYRGKA-TGKPRSQQQPQQQQQ 289


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 206 LYTAGATRGDPWTTLVLYWDSELTP 132
           L  AG +  DP T   + W S L P
Sbjct: 184 LLPAGVSLDDPETQSAIKWSSHLDP 208


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,292
Number of Sequences: 2352
Number of extensions: 12038
Number of successful extensions: 43
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)