Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_F21
         (712 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0332 - 24145999-24146052,24146749-24147117,24147158-24147598     30   2.1  
07_03_1572 - 27815760-27815819,27816374-27816494,27816580-278166...    28   6.4  
06_03_1457 - 30287185-30287287,30287691-30287759,30288212-302883...    28   6.4  
03_06_0106 - 31682200-31682775                                         28   6.4  
11_06_0532 - 24726763-24727033,24729113-24729657                       28   8.4  

>05_05_0332 - 24145999-24146052,24146749-24147117,24147158-24147598
          Length = 287

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = -1

Query: 544 RPFHTDTRAALDIQYICPMPSARSWETSDPPVHPRISCRHCWTG 413
           R F    RA L+ +  CP   AR W  +   + PR +CR  W G
Sbjct: 175 RAFLVGHRAPLEPRVRCPYCGARVWSMTAAGLAPRSACR--WLG 216


>07_03_1572 -
           27815760-27815819,27816374-27816494,27816580-27816620,
           27816737-27816797,27817549-27817635,27817728-27817855,
           27817935-27818050,27820671-27820789,27820892-27820983,
           27821082-27821169,27822523-27822902
          Length = 430

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +1

Query: 574 KHCHHDADELIIGGTDAGVNEYPHMVLLGYGDDVANIXW 690
           +H +  AD + +   +A +     MVLLG+ DDV ++ W
Sbjct: 147 QHFNFTADSMWLVEYNAALASVCFMVLLGFIDDVLDVPW 185


>06_03_1457 - 30287185-30287287,30287691-30287759,30288212-30288351,
            30288447-30288641,30288743-30289363,30289688-30290257,
            30290332-30293638,30293764-30293863,30293978-30295014,
            30295256-30295604,30296299-30296374,30296456-30297022,
            30297094-30297238,30298281-30298405,30298491-30298582,
            30298646-30298828,30298946-30299058,30299499-30299649,
            30299720-30299882
          Length = 2701

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = +1

Query: 439  CEDVPADLTS---PKTGQKAWDKCIEYQEQLVYPC 534
            C+ +P + +S    K GQK W +   Y ++++ PC
Sbjct: 1369 CQSLPNESSSCKMSKRGQKLWGRFSSYVKEIIAPC 1403


>03_06_0106 - 31682200-31682775
          Length = 191

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 707 STPPHSXWMFATSSP*PSRTMCGYSLT 627
           S PP S W    S P P R+  G++LT
Sbjct: 121 SAPPRSCWTLTASHP-PPRSAAGFALT 146


>11_06_0532 - 24726763-24727033,24729113-24729657
          Length = 271

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 12/54 (22%)
 Frame = +1

Query: 577 HCHHDADELIIGGTD--------AGVNEYPHMVLLGYGDD----VANIXWLCGG 702
           HCH+   EL++G  D        AG++     +LL Y DD    V  + + CGG
Sbjct: 105 HCHNQGAELVVGEVDAALGSLDFAGMDGSLRRILLPYPDDVMLSVQLLRFACGG 158


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,840,961
Number of Sequences: 37544
Number of extensions: 400083
Number of successful extensions: 1083
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)