Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_F21
         (712 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47356-8|CAD27185.1|  477|Caenorhabditis elegans Hypothetical pr...    31   0.81 
Z47075-8|CAA87381.2|  477|Caenorhabditis elegans Hypothetical pr...    31   0.81 
Z81115-2|CAB03292.1|  314|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z35663-16|CAA84726.2|  462|Caenorhabditis elegans Hypothetical p...    29   2.5  
Z81134-5|CAB54316.1|  101|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U10414-11|AAA19078.1|  187|Caenorhabditis elegans Hypothetical p...    28   5.7  
Z78019-2|CAB01451.1|  347|Caenorhabditis elegans Hypothetical pr...    28   7.6  
AF026213-4|AAB71305.2|  458|Caenorhabditis elegans Cell death ab...    28   7.6  

>Z47356-8|CAD27185.1|  477|Caenorhabditis elegans Hypothetical
           protein E02H1.7 protein.
          Length = 477

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
 Frame = +1

Query: 13  ALASDRRWRQTRHVPYDPIK*CADNKLT-LNSLKMD-QSIYLLLMLVLFVCVHCEFEGEE 186
           ++++DRRWRQ + +       C D   T L +LK+  Q I ++ ++VLF C  C  +  E
Sbjct: 341 SVSADRRWRQEK-LYKQMTDCCIDEVATPLRNLKLSPQEIVVIKIIVLFNC-GCSSDYSE 398

Query: 187 CKKGNLLGVCTNIRKCQSAL 246
             + +   V T   K  SAL
Sbjct: 399 ITEASRRIVLTFRNKVVSAL 418


>Z47075-8|CAA87381.2|  477|Caenorhabditis elegans Hypothetical
           protein E02H1.7 protein.
          Length = 477

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
 Frame = +1

Query: 13  ALASDRRWRQTRHVPYDPIK*CADNKLT-LNSLKMD-QSIYLLLMLVLFVCVHCEFEGEE 186
           ++++DRRWRQ + +       C D   T L +LK+  Q I ++ ++VLF C  C  +  E
Sbjct: 341 SVSADRRWRQEK-LYKQMTDCCIDEVATPLRNLKLSPQEIVVIKIIVLFNC-GCSSDYSE 398

Query: 187 CKKGNLLGVCTNIRKCQSAL 246
             + +   V T   K  SAL
Sbjct: 399 ITEASRRIVLTFRNKVVSAL 418


>Z81115-2|CAB03292.1|  314|Caenorhabditis elegans Hypothetical
           protein T05D4.2 protein.
          Length = 314

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 388 EYVPPSYDYQSNNGDKKCEDVPADLTS-PKTGQKAWDKCIEYQEQ 519
           E++  ++ Y  NN   +C ++  D+ S P+   K  D+C EYQ Q
Sbjct: 43  EHLTSAHSYTKNN-HCQCYEIAVDICSEPRVRVKGLDRCWEYQIQ 86


>Z35663-16|CAA84726.2|  462|Caenorhabditis elegans Hypothetical
           protein T04A8.3 protein.
          Length = 462

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
 Frame = +1

Query: 406 YDYQSNNGD--KKCEDVPADLTSPKTGQKAWDKCIEYQEQLVYPCEKGVALTGEISRSKH 579
           +D   NN D  KKC D+ A L+S  T ++   K ++     VYP +  +A+     R + 
Sbjct: 295 HDMSMNNDDAEKKCNDMGAHLSSFTTYEEL--KLLDEMILEVYPNDNNIAVWLGAKRREE 352

Query: 580 CHHDADELIIGGTDAGVNE 636
           C  D  +   GG    +++
Sbjct: 353 C-GDLSKNFTGGYSKDIHD 370


>Z81134-5|CAB54316.1|  101|Caenorhabditis elegans Hypothetical
           protein T28D6.9 protein.
          Length = 101

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 10/27 (37%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = -2

Query: 468 RRQIRRYILAFLV-AIVGLVIIGGWHV 391
           RRQIR+Y++A +V +I  ++++  W +
Sbjct: 50  RRQIRKYVIASIVGSIFWIIVLSAWEI 76


>U10414-11|AAA19078.1|  187|Caenorhabditis elegans Hypothetical
           protein F42A10.7 protein.
          Length = 187

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = -3

Query: 587 WWQCLLRLISPVSATPFSHGYTSCS*YSIHLSHAFCPVLGDVRSAGTSSHFLSPLL 420
           WWQC    +  ++ATP+         Y IHLS    P++   +    +S ++SP L
Sbjct: 41  WWQCSSGPVQFLNATPYDSTGKQYE-YPIHLSQ---PIVVKTQINNPTSTYVSPNL 92


>Z78019-2|CAB01451.1|  347|Caenorhabditis elegans Hypothetical
           protein ZK863.5 protein.
          Length = 347

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 187 ILHPRIRNEHTQITLALTTNILI 119
           IL P IR +H Q+T ALT   ++
Sbjct: 216 ILRPEIREKHRQLTWALTVQTIV 238


>AF026213-4|AAB71305.2|  458|Caenorhabditis elegans Cell death
           abnormality protein 8 protein.
          Length = 458

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = -2

Query: 534 TRIHELLLIFNTFVPCLLP-GLGRRQIR-RYILAFLVAIVGLVII 406
           T I +LLL+ NTF+   +P  +     R RY+ A+ V  + ++++
Sbjct: 316 THIEKLLLLINTFIHIFIPFNMVEGNTRWRYLTAYSVEFIEMMLV 360


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,266,100
Number of Sequences: 27780
Number of extensions: 328088
Number of successful extensions: 864
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)