Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_F21
         (712 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    28   0.10 
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    23   2.9  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    22   5.0  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   6.6  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 27.9 bits (59), Expect = 0.10
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 565 SRSKHCHHDADELIIGGTDAGVNEYPHM 648
           S + +C       I+GGT+ G+NE+P M
Sbjct: 148 STNCNCGWKNPSRIVGGTNTGINEFPMM 175


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 211 VCTNIRKCQSALNDIRNRKS 270
           +C   ++  S+LN +RN KS
Sbjct: 34  ICNICKRVYSSLNSLRNHKS 53


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = +3

Query: 420 QQWRQEMRGCTGGSDVSQDRAEGMGQMY 503
           + WR    G     DV    +EG+G  Y
Sbjct: 20  EAWRLVADGILNAKDVDAVMSEGLGMRY 47


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = +3

Query: 9   RCISV*PSLETDASRAIRSNQIMCG**TYTEFFKNGSIN 125
           RC    PS+      ++R + I+CG    ++ F+    N
Sbjct: 332 RCSPSNPSITRTGLSSVRDSSIICGGNKRSQVFRGRDAN 370


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,563
Number of Sequences: 438
Number of extensions: 3817
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)