Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_F18
(732 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457119-1|CAG33400.1| 304|Homo sapiens TREX1 protein. 84 6e-16
BT020053-1|AAV38856.1| 304|Homo sapiens three prime repair exon... 84 6e-16
BT020052-1|AAV38855.1| 304|Homo sapiens three prime repair exon... 84 6e-16
BC023630-1|AAH23630.1| 369|Homo sapiens three prime repair exon... 84 6e-16
AJ243797-1|CAB50866.1| 304|Homo sapiens deoxyribonuclease III (... 84 6e-16
AF483777-1|AAL82504.1| 304|Homo sapiens three prime repair exon... 84 6e-16
AF319569-1|AAK07616.1| 314|Homo sapiens 3'-5' exonuclease TREX1... 84 6e-16
AF319568-1|AAK07615.1| 369|Homo sapiens 3'-5' exonuclease TREX1... 84 6e-16
AF319567-1|AAK07614.1| 314|Homo sapiens 3'-5' exonuclease TREX1... 84 6e-16
AF319566-1|AAK07613.1| 314|Homo sapiens 3'-5' exonuclease TREX1... 84 6e-16
AF151105-1|AAD48774.2| 314|Homo sapiens 3'-5' exonuclease TREX1... 84 6e-16
DQ650792-1|ABG43103.1| 278|Homo sapiens 3'-5' exonuclease TREX2... 77 9e-14
DQ145722-1|AAZ38719.1| 236|Homo sapiens three prime repair exon... 77 9e-14
AF319573-1|AAK07620.1| 236|Homo sapiens 3'-5' exonuclease TREX2... 77 9e-14
AF319572-1|AAK07619.1| 279|Homo sapiens 3'-5' exonuclease TREX2... 77 9e-14
AF319571-1|AAK07618.1| 279|Homo sapiens 3'-5' exonuclease TREX2... 77 9e-14
AF319570-1|AAK07617.1| 236|Homo sapiens 3'-5' exonuclease TREX2... 77 9e-14
AF151107-1|AAD48776.1| 236|Homo sapiens 3'-5' exonuclease TREX2... 77 9e-14
BC005364-1|AAH05364.1| 342|Homo sapiens chromosome 10 open read... 30 9.8
AL365185-2|CAH73629.1| 342|Homo sapiens chromosome 10 open read... 30 9.8
AL365185-1|CAH73628.1| 315|Homo sapiens chromosome 10 open read... 30 9.8
AL353149-2|CAH70341.1| 342|Homo sapiens chromosome 10 open read... 30 9.8
AL353149-1|CAH70340.1| 315|Homo sapiens chromosome 10 open read... 30 9.8
AL139406-2|CAH73712.1| 342|Homo sapiens chromosome 10 open read... 30 9.8
AL139406-1|CAH73711.1| 315|Homo sapiens chromosome 10 open read... 30 9.8
AK002080-1|BAA92073.1| 315|Homo sapiens protein ( Homo sapiens ... 30 9.8
>CR457119-1|CAG33400.1| 304|Homo sapiens TREX1 protein.
Length = 304
Score = 83.8 bits (198), Expect = 6e-16
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +2
Query: 128 TYVFFDIETTGLPFQXXNKTKXTELCFLAVSRDDLD---IQSGLPP--------IKKLSF 274
T +FFD+E TGLPF ++ K TELC LAV R L+ G PP + KLS
Sbjct: 3 TLIFFDMEATGLPF---SQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 59
Query: 275 VLNPEKKIHPDVVVLTGLTNESLK--NAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSF 445
+ P K P +TGL+ L F AN +++FL P+P CLVAHNG+ +
Sbjct: 60 CVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRY 119
Query: 446 DYKILLAECNDAGILLPSD-LLCIDSLIGFRKILKTTQKS 562
D+ +L AE G+ D C+DS+ + + + + S
Sbjct: 120 DFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPS 159
>BT020053-1|AAV38856.1| 304|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 304
Score = 83.8 bits (198), Expect = 6e-16
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +2
Query: 128 TYVFFDIETTGLPFQXXNKTKXTELCFLAVSRDDLD---IQSGLPP--------IKKLSF 274
T +FFD+E TGLPF ++ K TELC LAV R L+ G PP + KLS
Sbjct: 3 TLIFFDMEATGLPF---SQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 59
Query: 275 VLNPEKKIHPDVVVLTGLTNESLK--NAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSF 445
+ P K P +TGL+ L F AN +++FL P+P CLVAHNG+ +
Sbjct: 60 CVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRY 119
Query: 446 DYKILLAECNDAGILLPSD-LLCIDSLIGFRKILKTTQKS 562
D+ +L AE G+ D C+DS+ + + + + S
Sbjct: 120 DFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPS 159
>BT020052-1|AAV38855.1| 304|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 304
Score = 83.8 bits (198), Expect = 6e-16
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +2
Query: 128 TYVFFDIETTGLPFQXXNKTKXTELCFLAVSRDDLD---IQSGLPP--------IKKLSF 274
T +FFD+E TGLPF ++ K TELC LAV R L+ G PP + KLS
Sbjct: 3 TLIFFDMEATGLPF---SQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 59
Query: 275 VLNPEKKIHPDVVVLTGLTNESLK--NAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSF 445
+ P K P +TGL+ L F AN +++FL P+P CLVAHNG+ +
Sbjct: 60 CVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRY 119
Query: 446 DYKILLAECNDAGILLPSD-LLCIDSLIGFRKILKTTQKS 562
D+ +L AE G+ D C+DS+ + + + + S
Sbjct: 120 DFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPS 159
>BC023630-1|AAH23630.1| 369|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 369
Score = 83.8 bits (198), Expect = 6e-16
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +2
Query: 128 TYVFFDIETTGLPFQXXNKTKXTELCFLAVSRDDLD---IQSGLPP--------IKKLSF 274
T +FFD+E TGLPF ++ K TELC LAV R L+ G PP + KLS
Sbjct: 68 TLIFFDMEATGLPF---SQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 124
Query: 275 VLNPEKKIHPDVVVLTGLTNESLK--NAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSF 445
+ P K P +TGL+ L F AN +++FL P+P CLVAHNG+ +
Sbjct: 125 CVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRY 184
Query: 446 DYKILLAECNDAGILLPSD-LLCIDSLIGFRKILKTTQKS 562
D+ +L AE G+ D C+DS+ + + + + S
Sbjct: 185 DFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPS 224
>AJ243797-1|CAB50866.1| 304|Homo sapiens deoxyribonuclease III
(DNase III) protein.
Length = 304
Score = 83.8 bits (198), Expect = 6e-16
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +2
Query: 128 TYVFFDIETTGLPFQXXNKTKXTELCFLAVSRDDLD---IQSGLPP--------IKKLSF 274
T +FFD+E TGLPF ++ K TELC LAV R L+ G PP + KLS
Sbjct: 3 TLIFFDMEATGLPF---SQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 59
Query: 275 VLNPEKKIHPDVVVLTGLTNESLK--NAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSF 445
+ P K P +TGL+ L F AN +++FL P+P CLVAHNG+ +
Sbjct: 60 CVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRY 119
Query: 446 DYKILLAECNDAGILLPSD-LLCIDSLIGFRKILKTTQKS 562
D+ +L AE G+ D C+DS+ + + + + S
Sbjct: 120 DFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPS 159
>AF483777-1|AAL82504.1| 304|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 304
Score = 83.8 bits (198), Expect = 6e-16
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +2
Query: 128 TYVFFDIETTGLPFQXXNKTKXTELCFLAVSRDDLD---IQSGLPP--------IKKLSF 274
T +FFD+E TGLPF ++ K TELC LAV R L+ G PP + KLS
Sbjct: 3 TLIFFDMEATGLPF---SQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 59
Query: 275 VLNPEKKIHPDVVVLTGLTNESLK--NAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSF 445
+ P K P +TGL+ L F AN +++FL P+P CLVAHNG+ +
Sbjct: 60 CVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRY 119
Query: 446 DYKILLAECNDAGILLPSD-LLCIDSLIGFRKILKTTQKS 562
D+ +L AE G+ D C+DS+ + + + + S
Sbjct: 120 DFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPS 159
>AF319569-1|AAK07616.1| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 83.8 bits (198), Expect = 6e-16
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +2
Query: 128 TYVFFDIETTGLPFQXXNKTKXTELCFLAVSRDDLD---IQSGLPP--------IKKLSF 274
T +FFD+E TGLPF ++ K TELC LAV R L+ G PP + KLS
Sbjct: 13 TLIFFDMEATGLPF---SQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 69
Query: 275 VLNPEKKIHPDVVVLTGLTNESLK--NAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSF 445
+ P K P +TGL+ L F AN +++FL P+P CLVAHNG+ +
Sbjct: 70 CVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRY 129
Query: 446 DYKILLAECNDAGILLPSD-LLCIDSLIGFRKILKTTQKS 562
D+ +L AE G+ D C+DS+ + + + + S
Sbjct: 130 DFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPS 169
>AF319568-1|AAK07615.1| 369|Homo sapiens 3'-5' exonuclease
TREX1-like protein protein.
Length = 369
Score = 83.8 bits (198), Expect = 6e-16
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +2
Query: 128 TYVFFDIETTGLPFQXXNKTKXTELCFLAVSRDDLD---IQSGLPP--------IKKLSF 274
T +FFD+E TGLPF ++ K TELC LAV R L+ G PP + KLS
Sbjct: 68 TLIFFDMEATGLPF---SQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 124
Query: 275 VLNPEKKIHPDVVVLTGLTNESLK--NAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSF 445
+ P K P +TGL+ L F AN +++FL P+P CLVAHNG+ +
Sbjct: 125 CVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRY 184
Query: 446 DYKILLAECNDAGILLPSD-LLCIDSLIGFRKILKTTQKS 562
D+ +L AE G+ D C+DS+ + + + + S
Sbjct: 185 DFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPS 224
>AF319567-1|AAK07614.1| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 83.8 bits (198), Expect = 6e-16
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +2
Query: 128 TYVFFDIETTGLPFQXXNKTKXTELCFLAVSRDDLD---IQSGLPP--------IKKLSF 274
T +FFD+E TGLPF ++ K TELC LAV R L+ G PP + KLS
Sbjct: 13 TLIFFDMEATGLPF---SQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 69
Query: 275 VLNPEKKIHPDVVVLTGLTNESLK--NAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSF 445
+ P K P +TGL+ L F AN +++FL P+P CLVAHNG+ +
Sbjct: 70 CVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRY 129
Query: 446 DYKILLAECNDAGILLPSD-LLCIDSLIGFRKILKTTQKS 562
D+ +L AE G+ D C+DS+ + + + + S
Sbjct: 130 DFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPS 169
>AF319566-1|AAK07613.1| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 83.8 bits (198), Expect = 6e-16
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +2
Query: 128 TYVFFDIETTGLPFQXXNKTKXTELCFLAVSRDDLD---IQSGLPP--------IKKLSF 274
T +FFD+E TGLPF ++ K TELC LAV R L+ G PP + KLS
Sbjct: 13 TLIFFDMEATGLPF---SQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 69
Query: 275 VLNPEKKIHPDVVVLTGLTNESLK--NAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSF 445
+ P K P +TGL+ L F AN +++FL P+P CLVAHNG+ +
Sbjct: 70 CVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRY 129
Query: 446 DYKILLAECNDAGILLPSD-LLCIDSLIGFRKILKTTQKS 562
D+ +L AE G+ D C+DS+ + + + + S
Sbjct: 130 DFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPS 169
>AF151105-1|AAD48774.2| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 83.8 bits (198), Expect = 6e-16
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +2
Query: 128 TYVFFDIETTGLPFQXXNKTKXTELCFLAVSRDDLD---IQSGLPP--------IKKLSF 274
T +FFD+E TGLPF ++ K TELC LAV R L+ G PP + KLS
Sbjct: 13 TLIFFDMEATGLPF---SQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 69
Query: 275 VLNPEKKIHPDVVVLTGLTNESLK--NAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSF 445
+ P K P +TGL+ L F AN +++FL P+P CLVAHNG+ +
Sbjct: 70 CVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRY 129
Query: 446 DYKILLAECNDAGILLPSD-LLCIDSLIGFRKILKTTQKS 562
D+ +L AE G+ D C+DS+ + + + + S
Sbjct: 130 DFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPS 169
>DQ650792-1|ABG43103.1| 278|Homo sapiens 3'-5' exonuclease TREX2
long form protein.
Length = 278
Score = 76.6 bits (180), Expect = 9e-14
Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 11/150 (7%)
Frame = +2
Query: 119 RITTYVFFDIETTGLPFQXXNKTKXTELCFLAVSRDDLDI----QSG---LPPI-KKLSF 274
R T+VF D+E TGLP + + EL AV R L+ +SG LP + KL+
Sbjct: 48 RAETFVFLDLEATGLP---SVEPEIAELSLFAVHRSSLENPEHDESGALVLPRVLDKLTL 104
Query: 275 VLNPEKKIHPDVVVLTGLTNESL---KNAPTFKQRANAIVSFLNELPKPICLVAHNGNSF 445
+ PE+ +TGL++E L + A + +FL+ PICLVAHNG +
Sbjct: 105 CMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNGFDY 164
Query: 446 DYKILLAECNDAGILLPSDLLCIDSLIGFR 535
D+ +L AE G LP D +C+D+L R
Sbjct: 165 DFPLLCAELRRLGARLPRDTVCLDTLPALR 194
>DQ145722-1|AAZ38719.1| 236|Homo sapiens three prime repair
exonuclease 2 protein.
Length = 236
Score = 76.6 bits (180), Expect = 9e-14
Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 11/150 (7%)
Frame = +2
Query: 119 RITTYVFFDIETTGLPFQXXNKTKXTELCFLAVSRDDLDI----QSG---LPPI-KKLSF 274
R T+VF D+E TGLP + + EL AV R L+ +SG LP + KL+
Sbjct: 6 RAETFVFLDLEATGLP---SVEPEIAELSLFAVHRSSLENPEHDESGALVLPRVLDKLTL 62
Query: 275 VLNPEKKIHPDVVVLTGLTNESL---KNAPTFKQRANAIVSFLNELPKPICLVAHNGNSF 445
+ PE+ +TGL++E L + A + +FL+ PICLVAHNG +
Sbjct: 63 CMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNGFDY 122
Query: 446 DYKILLAECNDAGILLPSDLLCIDSLIGFR 535
D+ +L AE G LP D +C+D+L R
Sbjct: 123 DFPLLCAELRRLGARLPRDTVCLDTLPALR 152
>AF319573-1|AAK07620.1| 236|Homo sapiens 3'-5' exonuclease TREX2
protein.
Length = 236
Score = 76.6 bits (180), Expect = 9e-14
Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 11/150 (7%)
Frame = +2
Query: 119 RITTYVFFDIETTGLPFQXXNKTKXTELCFLAVSRDDLDI----QSG---LPPI-KKLSF 274
R T+VF D+E TGLP + + EL AV R L+ +SG LP + KL+
Sbjct: 6 RAETFVFLDLEATGLP---SVEPEIAELSLFAVHRSSLENPEHDESGALVLPRVLDKLTL 62
Query: 275 VLNPEKKIHPDVVVLTGLTNESL---KNAPTFKQRANAIVSFLNELPKPICLVAHNGNSF 445
+ PE+ +TGL++E L + A + +FL+ PICLVAHNG +
Sbjct: 63 CMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNGFDY 122
Query: 446 DYKILLAECNDAGILLPSDLLCIDSLIGFR 535
D+ +L AE G LP D +C+D+L R
Sbjct: 123 DFPLLCAELRRLGARLPRDTVCLDTLPALR 152
>AF319572-1|AAK07619.1| 279|Homo sapiens 3'-5' exonuclease
TREX2-like protein protein.
Length = 279
Score = 76.6 bits (180), Expect = 9e-14
Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 11/150 (7%)
Frame = +2
Query: 119 RITTYVFFDIETTGLPFQXXNKTKXTELCFLAVSRDDLDI----QSG---LPPI-KKLSF 274
R T+VF D+E TGLP + + EL AV R L+ +SG LP + KL+
Sbjct: 49 RAETFVFLDLEATGLP---SVEPEIAELSLFAVHRSSLENPEHDESGALVLPRVLDKLTL 105
Query: 275 VLNPEKKIHPDVVVLTGLTNESL---KNAPTFKQRANAIVSFLNELPKPICLVAHNGNSF 445
+ PE+ +TGL++E L + A + +FL+ PICLVAHNG +
Sbjct: 106 CMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNGFDY 165
Query: 446 DYKILLAECNDAGILLPSDLLCIDSLIGFR 535
D+ +L AE G LP D +C+D+L R
Sbjct: 166 DFPLLCAELRRLGARLPRDTVCLDTLPALR 195
>AF319571-1|AAK07618.1| 279|Homo sapiens 3'-5' exonuclease
TREX2-like protein protein.
Length = 279
Score = 76.6 bits (180), Expect = 9e-14
Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 11/150 (7%)
Frame = +2
Query: 119 RITTYVFFDIETTGLPFQXXNKTKXTELCFLAVSRDDLDI----QSG---LPPI-KKLSF 274
R T+VF D+E TGLP + + EL AV R L+ +SG LP + KL+
Sbjct: 49 RAETFVFLDLEATGLP---SVEPEIAELSLFAVHRSSLENPEHDESGALVLPRVLDKLTL 105
Query: 275 VLNPEKKIHPDVVVLTGLTNESL---KNAPTFKQRANAIVSFLNELPKPICLVAHNGNSF 445
+ PE+ +TGL++E L + A + +FL+ PICLVAHNG +
Sbjct: 106 CMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNGFDY 165
Query: 446 DYKILLAECNDAGILLPSDLLCIDSLIGFR 535
D+ +L AE G LP D +C+D+L R
Sbjct: 166 DFPLLCAELRRLGARLPRDTVCLDTLPALR 195
>AF319570-1|AAK07617.1| 236|Homo sapiens 3'-5' exonuclease TREX2
protein.
Length = 236
Score = 76.6 bits (180), Expect = 9e-14
Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 11/150 (7%)
Frame = +2
Query: 119 RITTYVFFDIETTGLPFQXXNKTKXTELCFLAVSRDDLDI----QSG---LPPI-KKLSF 274
R T+VF D+E TGLP + + EL AV R L+ +SG LP + KL+
Sbjct: 6 RAETFVFLDLEATGLP---SVEPEIAELSLFAVHRSSLENPEHDESGALVLPRVLDKLTL 62
Query: 275 VLNPEKKIHPDVVVLTGLTNESL---KNAPTFKQRANAIVSFLNELPKPICLVAHNGNSF 445
+ PE+ +TGL++E L + A + +FL+ PICLVAHNG +
Sbjct: 63 CMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNGFDY 122
Query: 446 DYKILLAECNDAGILLPSDLLCIDSLIGFR 535
D+ +L AE G LP D +C+D+L R
Sbjct: 123 DFPLLCAELRRLGARLPRDTVCLDTLPALR 152
>AF151107-1|AAD48776.1| 236|Homo sapiens 3'-5' exonuclease TREX2
protein.
Length = 236
Score = 76.6 bits (180), Expect = 9e-14
Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 11/150 (7%)
Frame = +2
Query: 119 RITTYVFFDIETTGLPFQXXNKTKXTELCFLAVSRDDLDI----QSG---LPPI-KKLSF 274
R T+VF D+E TGLP + + EL AV R L+ +SG LP + KL+
Sbjct: 6 RAETFVFLDLEATGLP---SVEPEIAELSLFAVHRSSLENPEHDESGALVLPRVLDKLTL 62
Query: 275 VLNPEKKIHPDVVVLTGLTNESL---KNAPTFKQRANAIVSFLNELPKPICLVAHNGNSF 445
+ PE+ +TGL++E L + A + +FL+ PICLVAHNG +
Sbjct: 63 CMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNGFDY 122
Query: 446 DYKILLAECNDAGILLPSDLLCIDSLIGFR 535
D+ +L AE G LP D +C+D+L R
Sbjct: 123 DFPLLCAELRRLGARLPRDTVCLDTLPALR 152
>BC005364-1|AAH05364.1| 342|Homo sapiens chromosome 10 open reading
frame 59 protein.
Length = 342
Score = 29.9 bits (64), Expect = 9.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +3
Query: 609 CYGQNSTCLQKIGKKLIICVPHLAKTH 689
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
>AL365185-2|CAH73629.1| 342|Homo sapiens chromosome 10 open reading
frame 59 protein.
Length = 342
Score = 29.9 bits (64), Expect = 9.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +3
Query: 609 CYGQNSTCLQKIGKKLIICVPHLAKTH 689
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
>AL365185-1|CAH73628.1| 315|Homo sapiens chromosome 10 open reading
frame 59 protein.
Length = 315
Score = 29.9 bits (64), Expect = 9.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +3
Query: 609 CYGQNSTCLQKIGKKLIICVPHLAKTH 689
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
>AL353149-2|CAH70341.1| 342|Homo sapiens chromosome 10 open reading
frame 59 protein.
Length = 342
Score = 29.9 bits (64), Expect = 9.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +3
Query: 609 CYGQNSTCLQKIGKKLIICVPHLAKTH 689
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
>AL353149-1|CAH70340.1| 315|Homo sapiens chromosome 10 open reading
frame 59 protein.
Length = 315
Score = 29.9 bits (64), Expect = 9.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +3
Query: 609 CYGQNSTCLQKIGKKLIICVPHLAKTH 689
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
>AL139406-2|CAH73712.1| 342|Homo sapiens chromosome 10 open reading
frame 59 protein.
Length = 342
Score = 29.9 bits (64), Expect = 9.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +3
Query: 609 CYGQNSTCLQKIGKKLIICVPHLAKTH 689
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
>AL139406-1|CAH73711.1| 315|Homo sapiens chromosome 10 open reading
frame 59 protein.
Length = 315
Score = 29.9 bits (64), Expect = 9.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +3
Query: 609 CYGQNSTCLQKIGKKLIICVPHLAKTH 689
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
>AK002080-1|BAA92073.1| 315|Homo sapiens protein ( Homo sapiens
cDNA FLJ11218 fis, clone PLACE1008095. ).
Length = 315
Score = 29.9 bits (64), Expect = 9.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +3
Query: 609 CYGQNSTCLQKIGKKLIICVPHLAKTH 689
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,263,264
Number of Sequences: 237096
Number of extensions: 1679879
Number of successful extensions: 3451
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3415
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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