Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_F18
(732 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00040-5|AAA50666.1| 934|Caenorhabditis elegans Hypothetical pr... 31 1.1
U40946-3|AAO91681.1| 851|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 30 1.9
AC084158-9|AAK68559.2| 465|Caenorhabditis elegans Hypothetical ... 29 3.4
Z68301-9|CAA92628.1| 456|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z68299-8|CAA92615.1| 456|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z66564-6|CAA91473.4| 737|Caenorhabditis elegans Hypothetical pr... 29 4.5
U53340-5|AAR25650.1| 425|Caenorhabditis elegans Hypothetical pr... 29 4.5
U53340-4|AAA96209.2| 445|Caenorhabditis elegans Hypothetical pr... 29 4.5
AY887904-1|AAX34416.1| 737|Caenorhabditis elegans anion transpo... 29 4.5
AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical ... 28 5.9
U50310-4|ABB51170.1| 409|Caenorhabditis elegans Hypothetical pr... 28 7.8
U50310-3|AAA92540.4| 411|Caenorhabditis elegans Hypothetical pr... 28 7.8
>U00040-5|AAA50666.1| 934|Caenorhabditis elegans Hypothetical
protein C18H2.4 protein.
Length = 934
Score = 30.7 bits (66), Expect = 1.1
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 16/149 (10%)
Frame = +2
Query: 212 AVSRDDL-DIQSGLPPIKKLSFVLNPEKKIHP----DVVV-LTGLTNESLKNAPTFKQRA 373
AVSR+D+ + +G + L +++ + IH D+VV L GL +S T
Sbjct: 113 AVSREDVVKVSNGTEWLNTLKGLVSTFEDIHQINKIDIVVFLNGLYGDSFAKKAT-SCND 171
Query: 374 NAIVSFLNELPKPICLVAHNGNS----------FDYKILLAECNDAGILLPSDLLCIDSL 523
I +FL K I AHN N D + L EC D S + I +
Sbjct: 172 TVIETFLM-FYKVIRSAAHNTNGTLVKESINTFLDLETELFECLDNISSYKSIFIPIVTR 230
Query: 524 IGFRKILKTTQKSLPLKMNTSKDDSASEL 610
+ F L+ T KSL K+ KD++ ++L
Sbjct: 231 LNFFTALEKTIKSLNSKIPNKKDEAVTKL 259
>U40946-3|AAO91681.1| 851|Caenorhabditis elegans Hypothetical
protein W05H9.2 protein.
Length = 851
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 599 ASELLWPELDVSTENWEEIDNLCASFSK-DTCIDDEKSKK 715
A+ELLWP++D ++ +CA S D +D EK K+
Sbjct: 542 AAELLWPKIDGVMFQLNKVPGICAFVSNFDDHVDREKVKE 581
>Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical
protein C25F9.2 protein.
Length = 1469
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/24 (58%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Frame = +2
Query: 419 LVAHNGNSFDYKILLAECN-DAGI 487
+VAHNG S+D+ +LLAE + AGI
Sbjct: 711 IVAHNGGSYDHVMLLAELDRQAGI 734
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 29.9 bits (64), Expect = 1.9
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +2
Query: 290 KKIHPDVVVLTGLTNESLKNAPTFKQRANAIVSFLNELPKPICLVAHNGNSFDYKILLA- 466
K+IH ++ K +FK R V FLN + I ++ + F YK+ A
Sbjct: 93 KEIHLELKSSKNKYEGLRKKIASFKGRQQKAVGFLNSGLEEIRILTSPNDKFCYKVKNAS 152
Query: 467 -ECN-DAGILLPSDLLCIDSLIGFRKILKTT 553
C+ D I L L + LIG K ++ T
Sbjct: 153 WRCSVDNSIDLQKIKLICEKLIGLEKKMEVT 183
>AC084158-9|AAK68559.2| 465|Caenorhabditis elegans Hypothetical
protein Y69A2AR.15 protein.
Length = 465
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = -1
Query: 156 VVSMSKXT*VVXRTILWMSFCDLQLLFDEMKFACWKKMKL*HVDF*ETFF 7
V+S K +LWM+ C L + + F + H+DF +T F
Sbjct: 75 VLSQQKSKRASVEPLLWMAICSLLMAISPLPFTIYYYNLSHHLDFNQTLF 124
>Z68301-9|CAA92628.1| 456|Caenorhabditis elegans Hypothetical
protein T04B2.5 protein.
Length = 456
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +2
Query: 545 KTTQKSLPLKMNTSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKEN 721
+ + K + ++++ D +++W L TEN EID L K E+ ++ N
Sbjct: 395 RLSPKGISVRIDQIDDSKLMDMIWTTLIYLTENVHEIDQLGEMIYKLKSDPTERKRRSN 453
>Z68299-8|CAA92615.1| 456|Caenorhabditis elegans Hypothetical
protein T04B2.5 protein.
Length = 456
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +2
Query: 545 KTTQKSLPLKMNTSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKEN 721
+ + K + ++++ D +++W L TEN EID L K E+ ++ N
Sbjct: 395 RLSPKGISVRIDQIDDSKLMDMIWTTLIYLTENVHEIDQLGEMIYKLKSDPTERKRRSN 453
>Z66564-6|CAA91473.4| 737|Caenorhabditis elegans Hypothetical
protein F52D10.1 protein.
Length = 737
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/110 (20%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Frame = +2
Query: 50 FQHANFISSNSSCKSQKLIHKMVRITTYVFFDIETTGL-PFQXXNKTKXTELCFLAVSRD 226
F++A F S+ ++ +L HK+ + FFD+ T + + + K + + LA D
Sbjct: 70 FKNAVFSVSDRDSRAPRLHHKLQSYSGTDFFDVNQTWIVTYAQLDGLKQSHMA-LATLED 128
Query: 227 DLDIQSGLPPIKKLSFVLNPEKKIHPDVVVLTGLTNESLKNAPTFKQRAN 376
++ + + + +L+P + H T +L T +Q N
Sbjct: 129 ATNLGLEMEEARTVVLILSPSYEKHTKSAAEIARTFATLLMNDTLRQSVN 178
>U53340-5|AAR25650.1| 425|Caenorhabditis elegans Hypothetical
protein F02E8.2b protein.
Length = 425
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 11 NVSQKSTCQSFIFFQHANFISSNSSCKSQKLIHKMVRITTYVFF 142
+ S S QSF H + S ++QK++ KM+ T VFF
Sbjct: 302 HTSNNSNTQSFPLTVHTKNVQPPRSQQAQKMVIKMLVTVTAVFF 345
>U53340-4|AAA96209.2| 445|Caenorhabditis elegans Hypothetical
protein F02E8.2a protein.
Length = 445
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 11 NVSQKSTCQSFIFFQHANFISSNSSCKSQKLIHKMVRITTYVFF 142
+ S S QSF H + S ++QK++ KM+ T VFF
Sbjct: 322 HTSNNSNTQSFPLTVHTKNVQPPRSQQAQKMVIKMLVTVTAVFF 365
>AY887904-1|AAX34416.1| 737|Caenorhabditis elegans anion
transporter ABTS-2 protein.
Length = 737
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/110 (20%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Frame = +2
Query: 50 FQHANFISSNSSCKSQKLIHKMVRITTYVFFDIETTGL-PFQXXNKTKXTELCFLAVSRD 226
F++A F S+ ++ +L HK+ + FFD+ T + + + K + + LA D
Sbjct: 70 FKNAVFSVSDRDSRAPRLHHKLQSYSGTDFFDVNQTWIVTYAQLDGLKQSHMA-LATLED 128
Query: 227 DLDIQSGLPPIKKLSFVLNPEKKIHPDVVVLTGLTNESLKNAPTFKQRAN 376
++ + + + +L+P + H T +L T +Q N
Sbjct: 129 ATNLGLEMEEARTVVLILSPSYEKHTKSAAEIARTFATLLMNDTLRQSVN 178
>AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical
protein ZC132.5 protein.
Length = 1277
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 485 ILLPSDLLCIDSLIGFRKILKTTQKSLPLKMNTS 586
I LPS +L I ++ G+ + K T+ S PL+M+++
Sbjct: 45 IQLPSGILLIKTVFGYTTMGKNTKWSKPLEMDST 78
>U50310-4|ABB51170.1| 409|Caenorhabditis elegans Hypothetical
protein ZC487.1b protein.
Length = 409
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 21 KNQHVKVSFSSNMQISFHQTAVASRKSS-SIKW 116
KN H+ ++F S + HQT++ R+S+ + W
Sbjct: 299 KNYHLVINFPSAEGVLIHQTSILKRESNMRVSW 331
>U50310-3|AAA92540.4| 411|Caenorhabditis elegans Hypothetical
protein ZC487.1a protein.
Length = 411
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 21 KNQHVKVSFSSNMQISFHQTAVASRKSS-SIKW 116
KN H+ ++F S + HQT++ R+S+ + W
Sbjct: 301 KNYHLVINFPSAEGVLIHQTSILKRESNMRVSW 333
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,332,344
Number of Sequences: 27780
Number of extensions: 304182
Number of successful extensions: 815
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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