Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_F14
         (461 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    44   7e-07
EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    29   0.021
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     20   9.7  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    20   9.7  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    20   9.7  

>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 44.0 bits (99), Expect = 7e-07
 Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
 Frame = +2

Query: 62  MAXAQLTFTSSWGGKRAAIAGTVSCRXXX-SLASIYKLIQNEAEKLLLCQK 211
           +  AQL FT +WG KRA    +  C+    ++  IYK+IQNEA+KL+ C+K
Sbjct: 16  LCAAQLNFTPNWG-KRAPEGESNRCKESVDTIMLIYKIIQNEAQKLVDCEK 65


>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 29.1 bits (62), Expect = 0.021
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
 Frame = +2

Query: 32  FSSFVLACFI-MAXAQLTFTSSWGGKRAAIAGT--VSCR-XXXSLASIYKLIQ 178
           F   VL  F+ +  AQL F++ WG +  + AG+   +C+    ++  IYK+IQ
Sbjct: 5   FLIVVLIAFVGVCTAQLNFSTDWGKRSGSSAGSDANNCKEPVETIMLIYKIIQ 57


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 193 TPAMPEALSRH 225
           +PAMP  L+RH
Sbjct: 131 SPAMPHNLTRH 141


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 66  PXPNSLSHPAGVXKGLPSPAL 128
           P P+  S   G   G+P PAL
Sbjct: 79  PHPSLSSGLGGGLSGMPMPAL 99


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 36  LPLFWLASSWPXP 74
           LPL W A+S P P
Sbjct: 62  LPLAWQANSPPSP 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,914
Number of Sequences: 336
Number of extensions: 1421
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)