Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_F14
         (461 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ388479-1|ABD43194.1|   79|Anopheles gambiae adipokinetic hormo...    32   0.008
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   5.2  

>DQ388479-1|ABD43194.1|   79|Anopheles gambiae adipokinetic hormone
           I preproprotein protein.
          Length = 79

 Score = 32.3 bits (70), Expect = 0.008
 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 10/61 (16%)
 Frame = +2

Query: 59  IMAXAQLTFTSSWGGKR---------AAIAGTVSCR-XXXSLASIYKLIQNEAEKLLLCQ 208
           ++  AQLTFT +WG +           +  G  +C+    SL  IY++IQ EA+K++ C 
Sbjct: 18  LITEAQLTFTPAWGKRSQGAMGINPLGSTFGQDACKTPVDSLLVIYRMIQAEAQKIVDCS 77

Query: 209 K 211
           +
Sbjct: 78  Q 78


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 214 LSRHHRNGNTDKMPFNHYIIFS*SMKCIHKL 306
           L+ HHRN +T +M     +IF   + CI ++
Sbjct: 331 LNYHHRNADTHEMSDWVRVIFLYWLPCILRM 361


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 338,155
Number of Sequences: 2352
Number of extensions: 6012
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39969834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)