Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_F13
         (375 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   3.1  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   5.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   9.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    20   9.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 303 HILFYLKIYIFCC 265
           H+LF L IY F C
Sbjct: 278 HLLFLLCIYYFYC 290



 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 303 HILFYLKIYIFCC 265
           H+LF L IY F C
Sbjct: 159 HLLFLLCIYHFFC 171



 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 303 HILFYLKIYIFCCL 262
           H+LFY  + I  C+
Sbjct: 225 HLLFYCVLIILLCI 238


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 75  SVNCLPQPGDXEVKVALE 22
           + NC P P D E  ++LE
Sbjct: 93  AANCPPSPKDDEKCLSLE 110


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 277 HFLLFMNFCFCKKLLN*CSLFD 212
           H L ++N    KK++N  + FD
Sbjct: 380 HILSYINKASFKKIVNTVATFD 401


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 157 LNNFYFI 177
           LNNFYFI
Sbjct: 294 LNNFYFI 300


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,071
Number of Sequences: 336
Number of extensions: 895
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)