Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_F13
         (375 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0130 + 17543991-17545758,17545889-17545971,17546396-17546467     28   2.7  
10_08_0075 - 14676835-14677173,14677776-14678426,14678734-146789...    27   6.3  

>03_04_0130 + 17543991-17545758,17545889-17545971,17546396-17546467
          Length = 640

 Score = 27.9 bits (59), Expect = 2.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 10  DSPLFQCNFHLVIAGLWQA 66
           D+P F C+ H  + G+WQ+
Sbjct: 408 DAPSFDCHLHDTVPGMWQS 426


>10_08_0075 -
           14676835-14677173,14677776-14678426,14678734-14678948,
           14679510-14679783,14680249-14680410
          Length = 546

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = +3

Query: 144 IKQNVE*LLLHNRKQSKKHQLKASNKEHQFKSFLQKQKFINN 269
           +K+ ++ LL+       KH++K  +K+  +K   + +KF  N
Sbjct: 200 LKEAIKSLLIKCHLPLSKHKVKVVDKDGNYKPIQRSKKFFKN 241


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,535,751
Number of Sequences: 37544
Number of extensions: 96210
Number of successful extensions: 190
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)