Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_F11
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.62 
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    24   1.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.4  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
 Frame = +2

Query: 377 FGTIITAFMFYLIA---SPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNK 547
           F  I+ A + Y  +   +PLF  +    N   + + F + LSG    F+ L+   + +  
Sbjct: 48  FHLILFAVLLYFASLEKNPLFDGQLYSFNTFAKLLIFVVSLSGNSAVFIMLIISFMHKKS 107

Query: 548 FL-VVQNVVALLLCGSQLSLFVIY 616
           F   V NV AL    ++L  ++ Y
Sbjct: 108 FKNFVNNVAALDETLAKLGQYINY 131


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 18/76 (23%), Positives = 34/76 (44%)
 Frame = +2

Query: 206 IQVNMFGLALNIIYVMIYFNYSQQKVKVWAQIGLAGAVSAALIGYAQTEDPKLVETRFGT 385
           +QV+M    L+ I ++  F + +  +     + +AG VS  +IGY +   P  +  +   
Sbjct: 1   LQVDMQLFVLSPIILIPLFRWPKIGLSALGFLIIAGCVSPFVIGYVKHFHPLALSNK-NA 59

Query: 386 IITAFMFYLIASPLFG 433
           I   + +Y      FG
Sbjct: 60  IDFNYYYYAATYARFG 75


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 574 LIAVRIATVTLRYIPIQAKRQ 636
           LIA  IATVT+ Y   + KR+
Sbjct: 389 LIATLIATVTVNYYRHKQKRR 409


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,567
Number of Sequences: 336
Number of extensions: 3383
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)