Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_F11
(723 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0986 - 12976344-12976679,12977962-12978081,12978414-129787... 70 2e-12
12_02_0309 - 17342900-17342904,17343860-17343887,17344003-173441... 68 7e-12
11_04_0426 - 17573681-17574010,17574163-17574282,17574382-175747... 68 9e-12
05_07_0303 - 29093045-29093176,29093332-29093451,29093570-290939... 62 6e-10
02_02_0570 - 11591854-11592054,11593388-11593507,11594205-115945... 62 6e-10
02_03_0395 - 18554596-18555090,18555194-18555566,18556026-18556168 59 3e-09
01_06_1559 + 38247463-38247499,38247711-38247747,38248181-382482... 59 3e-09
03_02_0956 + 12700507-12700540,12700640-12700676,12700792-127010... 56 3e-08
05_04_0372 + 20726103-20726139,20726266-20726302,20726953-207270... 55 7e-08
05_02_0137 + 6996336-6996415,6998240-6998351,6999292-6999453,699... 53 2e-07
01_05_0251 + 19952882-19955459,19956209-19956245,19956370-199565... 53 2e-07
01_03_0034 + 11828889-11828897,11829465-11829484,11829697-118297... 53 2e-07
01_06_0393 + 28968873-28968918,28969048-28969084,28969165-289693... 51 8e-07
12_01_0501 + 3976156-3976292,3976364-3976949 50 2e-06
09_04_0680 - 19401891-19402049,19402556-19402928,19403385-194034... 50 2e-06
01_05_0639 + 23873735-23873814,23873932-23874148,23874259-238744... 47 1e-05
01_05_0637 + 23860857-23860936,23861057-23861273,23861388-238615... 45 7e-05
09_02_0083 + 4081564-4081677,4081853-4082359 44 2e-04
09_02_0106 + 4347024-4347536,4349619-4349700,4350499-4350747,435... 36 0.025
09_02_0096 - 4221935-4222231 35 0.075
09_06_0252 + 21867179-21867283,21868362-21868526,21868621-218687... 28 6.5
10_08_0151 - 15229235-15229243,15230032-15230103,15230369-152304... 28 8.6
>03_02_0986 -
12976344-12976679,12977962-12978081,12978414-12978786,
12978934-12978970,12979160-12979196
Length = 300
Score = 70.1 bits (164), Expect = 2e-12
Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 7/159 (4%)
Frame = +2
Query: 161 ILNLQYGYILRDDTMIQVNMFGLALNIIYVMIYFNYSQQKVKVWA-------QIGLAGAV 319
+L L Y + D ++ +N G + +Y+ +Y Y+ ++ + + L AV
Sbjct: 53 MLWLYYALLTSDLLLLSINSIGCLVESLYLTVYLLYAPRQAMAFTLKLVCAMNLALFAAV 112
Query: 320 SAALIGYAQTEDPKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGT 499
AAL + D ++ T G I +F + +PL ++++I+ KS E MPF + T
Sbjct: 113 VAALQLLVKATDRRV--TLAGGIGASFALAVFVAPLTIIRQVIRTKSVEFMPFWLSFFLT 170
Query: 500 VVTFMWLLYGIILRNKFLVVQNVVALLLCGSQLSLFVIY 616
+ +W YG+++++ F+ NV+ LL +Q+ L+V+Y
Sbjct: 171 LSAVVWFFYGLLMKDFFVATPNVLGLLFGLAQMVLYVVY 209
Score = 31.1 bits (67), Expect = 0.93
Identities = 16/79 (20%), Positives = 35/79 (44%)
Frame = +2
Query: 380 GTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFLVV 559
G + F +I +P+ + + KSTE + +WL Y ++ + L+
Sbjct: 10 GIVGNILSFLVILAPVPTFYRVYKKKSTESFQSVPYAVALLSAMLWLYYALLTSDLLLLS 69
Query: 560 QNVVALLLCGSQLSLFVIY 616
N + L+ L+++++Y
Sbjct: 70 INSIGCLVESLYLTVYLLY 88
>12_02_0309 -
17342900-17342904,17343860-17343887,17344003-17344122,
17344252-17344413,17344655-17344865,17344980-17345016,
17345965-17346016
Length = 204
Score = 68.1 bits (159), Expect = 7e-12
Identities = 35/130 (26%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Frame = +2
Query: 203 MIQVNMFGLALNIIYVMIYFNYSQQKVKVWA-------QIGLAGAVSAALIGYAQTEDPK 361
+I +N G + IY+++Y Y+ +K KV+ +G+ G + + + E +
Sbjct: 73 LITINAAGCVIETIYIVMYLAYAPKKAKVFTTKILLLLNVGVFGVILLLTLLLSHGEQ-R 131
Query: 362 LVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILR 541
+V G + AF + +PL +K +IQ++S E MPF + L+ T+ +W LYG++++
Sbjct: 132 VVS--LGWVCVAFSVSVFVAPLSIIKRVIQSRSVEYMPFSLSLTLTLSAVVWFLYGLLIK 189
Query: 542 NKFLVVQNVV 571
+K++ + N++
Sbjct: 190 DKYVALPNIL 199
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +2
Query: 377 FGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFLV 556
FG + F +P+ I ++KSTEG + +W+ Y +I N+ L+
Sbjct: 14 FGLLGNLISFTTYLAPIPTFYRIYKSKSTEGFQSVPYVVALFSAMLWIFYALIKSNEALL 73
Query: 557 V 559
+
Sbjct: 74 I 74
>11_04_0426 -
17573681-17574010,17574163-17574282,17574382-17574754,
17575051-17575087,17575821-17575872
Length = 303
Score = 67.7 bits (158), Expect = 9e-12
Identities = 38/160 (23%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Frame = +2
Query: 161 ILNLQYGYILRDDTM-IQVNMFGLALNIIYVMIYFNYSQQKVKVWA-------QIGLAGA 316
+L + Y + D+ + I +N G + IY+ +Y Y+ +K K++ +G+ G
Sbjct: 58 MLWIYYALLKSDECLLITINSAGCVIETIYIAVYLVYAPKKAKMFTAKLLLLVNVGVFGL 117
Query: 317 VSAALIGYAQTEDPKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSG 496
+ + D ++V G + F + +PL ++ +++ KS E MPF + S
Sbjct: 118 ILLLTL-LLSAGDRRIVV--LGWVCVGFSVSVFVAPLSIIRLVVRTKSVEFMPFSLSFSL 174
Query: 497 TVVTFMWLLYGIILRNKFLVVQNVVALLLCGSQLSLFVIY 616
T+ +W LYG+++++K++ + NV+ Q+ L+ +Y
Sbjct: 175 TISAVVWFLYGLLIKDKYVALPNVLGFSFGVIQMGLYAMY 214
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/77 (22%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 389 ITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFLVVQ-N 565
I +FM YL P F I ++KST+G + +W+ Y ++ ++ L++ N
Sbjct: 20 IISFMTYLAPLPTF--YRIYKSKSTQGFQSVPYVVALFSAMLWIYYALLKSDECLLITIN 77
Query: 566 VVALLLCGSQLSLFVIY 616
++ ++++++Y
Sbjct: 78 SAGCVIETIYIAVYLVY 94
>05_07_0303 -
29093045-29093176,29093332-29093451,29093570-29093985,
29094163-29094208
Length = 237
Score = 61.7 bits (143), Expect = 6e-10
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 6/144 (4%)
Frame = +2
Query: 203 MIQVNMFGLALNIIYVMIYFNYSQQKVK------VWAQIGLAGAVSAALIGYAQTEDPKL 364
++ +N GL + I Y+ IYF Y+ + + + ++ AV+A ++ A T D +
Sbjct: 73 VVTINGTGLLIEIAYLAIYFAYAPKPKRCRMLGVLTVELVFLAAVAAGVLLGAHTYDKRS 132
Query: 365 VETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRN 544
+ GT+ F + A+PL +K++I KS E MPF + L + W +Y I +
Sbjct: 133 LIV--GTLCVFFGTLMYAAPLTIMKQVIATKSVEYMPFTLSLVSFINGICWTIYAFIRFD 190
Query: 545 KFLVVQNVVALLLCGSQLSLFVIY 616
+ + N + LL +QL L+ Y
Sbjct: 191 ILITIPNGMGTLLGAAQLILYFCY 214
>02_02_0570 -
11591854-11592054,11593388-11593507,11594205-11594583,
11594897-11594933,11595293-11595335
Length = 259
Score = 61.7 bits (143), Expect = 6e-10
Identities = 37/144 (25%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Frame = +2
Query: 203 MIQVNMFGLALNIIYVMIYFNYSQQKVK------VWAQIGLAGAVSAALIGYAQTEDPKL 364
+I +N G+A+ + Y+ ++ +S V+ + A++ AV+A ++ A T + +
Sbjct: 72 VITINGTGMAIELTYIALFLAFSLGAVRRRVLLLLAAEVAFVAAVAALVLNLAHTHERRS 131
Query: 365 VETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRN 544
+ G + F + A+PL +K +IQ KS E MP + L+ V W Y +I +
Sbjct: 132 MIV--GILCVLFGTGMYAAPLSVMKMVIQTKSVEYMPLFLSLASLVNGICWTAYALIRFD 189
Query: 545 KFLVVQNVVALLLCGSQLSLFVIY 616
++ + N + ++ +QL L+ IY
Sbjct: 190 LYITIPNGLGVMFAVAQLILYAIY 213
>02_03_0395 - 18554596-18555090,18555194-18555566,18556026-18556168
Length = 336
Score = 59.3 bits (137), Expect = 3e-09
Identities = 36/149 (24%), Positives = 75/149 (50%), Gaps = 7/149 (4%)
Frame = +2
Query: 197 DTMIQVNMFGLALNIIYVMIYFNYSQQ-------KVKVWAQIGLAGAVSAALIGYAQTED 355
+ ++ +N G + +Y+ +Y Y+ + K+ + IGL G ++ + ++ E
Sbjct: 89 ELLVTINGVGCVIETVYLAMYLAYAPKSARMLTAKMLLGLNIGLFGVIALVTLLLSRGE- 147
Query: 356 PKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGII 535
L G I A + A+PL ++ +I+ KS E MPF + + +W LYG++
Sbjct: 148 --LRVHVLGWICVAVSLSVFAAPLSIIRLVIRTKSVEFMPFSLSFFLVLSAVIWFLYGLL 205
Query: 536 LRNKFLVVQNVVALLLCGSQLSLFVIYPS 622
++ F+ + NV+ + +Q++L++ Y S
Sbjct: 206 KKDVFVALPNVLGFVFGVAQMALYMAYRS 234
>01_06_1559 +
38247463-38247499,38247711-38247747,38248181-38248276,
38248671-38248788,38248844-38248878,38249173-38249452,
38249701-38249820,38250369-38250620
Length = 324
Score = 59.3 bits (137), Expect = 3e-09
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Frame = +2
Query: 212 VNMFGLALNIIYVMIYFNYSQQK--VKVWAQIGLAGAVSAALIGYAQTEDPKLVETRF-G 382
+N G + IYV+I+ ++++K +K+ +GL ++ ++ + F G
Sbjct: 124 INGTGSVIEAIYVVIFLIFAERKARLKMMGLLGLVTSIFTMVVLVSLLALHGQGRKLFCG 183
Query: 383 TIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFLVVQ 562
T F + ASPL ++ +I+ KS E MPF + LS + W +YG++ R+ F+ +
Sbjct: 184 LAATIFSICMYASPLSIMRLVIKTKSVEFMPFLLSLSVFLCGTSWFIYGLLGRDPFIAIP 243
Query: 563 NVVALLLCGSQLSLFVIY 616
N L QL L+ IY
Sbjct: 244 NGCGSFLGLMQLILYAIY 261
>03_02_0956 +
12700507-12700540,12700640-12700676,12700792-12701002,
12701085-12701246,12701897-12702016,12702103-12702525
Length = 328
Score = 56.0 bits (129), Expect = 3e-08
Identities = 36/142 (25%), Positives = 72/142 (50%), Gaps = 4/142 (2%)
Frame = +2
Query: 203 MIQVNMFGLALNIIYVMIYFNYSQQKVKV-WAQIGLAGAVSA--ALIGYAQTEDPKLVET 373
++ VN G AL IYV +Y Y+ ++ K ++ LA V A A++ A V
Sbjct: 67 IVTVNGSGAALEAIYVTLYLAYAPRETKAKMVKVVLAVNVGALAAVVAVALVALHGGVRL 126
Query: 374 RF-GTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKF 550
G + A + A+P+ ++ +++ +S E MPF + + +W +Y +++++ F
Sbjct: 127 FVVGVLCAALTIGMYAAPMAAMRTVVKTRSVEYMPFSLSFFLFLNGGVWSVYSLLVKDYF 186
Query: 551 LVVQNVVALLLCGSQLSLFVIY 616
+ + N + L +QL+L++ Y
Sbjct: 187 IGIPNAIGFALGTAQLALYMAY 208
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +2
Query: 353 DPKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGI 532
DP G +I+ +F ASP+ + I+++KSTE + ++ + T +W YG+
Sbjct: 3 DPSFFVGIVGNVISILVF---ASPIATFRRIVRSKSTEEFRWLPYVTTLLSTSLWTFYGL 59
Query: 533 ILRNKFLVV 559
L+V
Sbjct: 60 HKPGGLLIV 68
>05_04_0372 +
20726103-20726139,20726266-20726302,20726953-20727048,
20728343-20728625,20728862-20728981,20729072-20729284
Length = 261
Score = 54.8 bits (126), Expect = 7e-08
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 7/159 (4%)
Frame = +2
Query: 161 ILNLQYG--YILRDDTMIQ-VNMFGLALNIIYVMIYFNYSQQKVKVWAQIGLAGAVSAAL 331
+L+ YG ++ ++ ++ +N G + YV+++ ++ +GLA AV++
Sbjct: 53 LLSAWYGLPFVSPNNILVSTINGAGAVIETAYVVVFLVFASTHKTRLRTLGLAAAVASVF 112
Query: 332 IGYAQTEDPKLV----ETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGT 499
A L + G T + ASPL ++ +I+ KS E MPF + L+
Sbjct: 113 AAVALVSLLALHGQHRKLLCGVAATVCSICMYASPLSIMRLVIKTKSVEYMPFLMSLAVF 172
Query: 500 VVTFMWLLYGIILRNKFLVVQNVVALLLCGSQLSLFVIY 616
+ W +YG++ R+ F+ + N L QL L+ IY
Sbjct: 173 LCGTSWFIYGLLGRDPFVTIPNGCGSFLGAVQLVLYAIY 211
>05_02_0137 +
6996336-6996415,6998240-6998351,6999292-6999453,
6999755-6999874,6999947-7000108
Length = 211
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/130 (23%), Positives = 59/130 (45%)
Frame = +2
Query: 227 LALNIIYVMIYFNYSQQKVKVWAQIGLAGAVSAALIGYAQTEDPKLVETRFGTIITAFMF 406
LAL ++ + ++V + A + LA + + + G++
Sbjct: 49 LALFSCLTYSWYGFPVKQVMLMASLILAVFCMTVFFSSFSIHNHHIRKVFVGSVGLVSSI 108
Query: 407 YLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFLVVQNVVALLLC 586
+ SPL +K++I+ KS E MPF + L + W+ YG+I R+ F+ N + ++
Sbjct: 109 SMYGSPLVAMKQVIRTKSVEFMPFYLSLFTLFTSLTWMAYGVIGRDPFIATPNCIGSIMG 168
Query: 587 GSQLSLFVIY 616
QL ++ IY
Sbjct: 169 ILQLVVYCIY 178
>01_05_0251 + 19952882-19955459,19956209-19956245,19956370-19956586,
19957063-19957221,19957397-19957516,19957609-19957719
Length = 1073
Score = 53.2 bits (122), Expect = 2e-07
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Frame = +2
Query: 170 LQYGYILRDDTMIQVNMFGLALNIIYVMIYFNYSQQK--VKVWAQIGLAGAVSAALIGYA 343
+ YG +L + VN G + Y + ++ K VKV + + + V A LI Y
Sbjct: 910 VSYGVVL----VATVNSIGALFQLAYTATFIAFADAKNRVKVSSLLVMVFGVFA-LIVYV 964
Query: 344 QTE--DPKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMW 517
D + + G + A + ++ ASPL + +I+ KS E MPF + LS +++ +
Sbjct: 965 SLALFDHQTRQLFVGYLSVASLIFMFASPLSIINLVIRTKSVEYMPFYLSLSMFLMSVSF 1024
Query: 518 LLYGIILRNKFLVVQNVVALLLCGSQLSLF 607
YG++L + F+ + N + +L QL L+
Sbjct: 1025 FAYGVLLHDFFIYIPNGIGTVLGVIQLVLY 1054
>01_03_0034 +
11828889-11828897,11829465-11829484,11829697-11829739,
11831088-11831252,11832745-11832864,11834709-11834879
Length = 175
Score = 53.2 bits (122), Expect = 2e-07
Identities = 36/113 (31%), Positives = 59/113 (52%)
Frame = +2
Query: 278 KVKVWAQIGLAGAVSAALIGYAQTEDPKLVETRFGTIITAFMFYLIASPLFGLKEIIQNK 457
K V IGL+GAV A+ +A ++ + G I F + ASPL + +IQ++
Sbjct: 29 KWAVGLDIGLSGAV-LAVATFAISQLQLRIRV-IGIICACFNVLMYASPLTAVINVIQHE 86
Query: 458 STEGMPFPIILSGTVVTFMWLLYGIILRNKFLVVQNVVALLLCGSQLSLFVIY 616
+ + MPF + + +WL+YGII R+ + + N + LL QL ++ IY
Sbjct: 87 NVDAMPFWLSFFLFLNGGVWLVYGIIDRDMLIGIPNGIGFLLGTIQLIVYAIY 139
>01_06_0393 +
28968873-28968918,28969048-28969084,28969165-28969384,
28969557-28969715,28969831-28969950,28972154-28972240,
28972329-28972418,28972516-28972602,28972761-28972877,
28972945-28973028,28973585-28975324,28975670-28975816,
28975998-28976431,28976523-28976667
Length = 1170
Score = 51.2 bits (117), Expect = 8e-07
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Frame = +2
Query: 212 VNMFGLALNIIYVMIYFNYSQQKVKVWAQIGLAGAVSA--ALIGYAQTE--DPKLVETRF 379
VN G + Y+ ++ Y+ + IGL V AL+ +A D L +
Sbjct: 76 VNGIGAVFQLAYICLFIFYADSRKTRMKIIGLLVLVVCGFALVSHASVFFFDQPLRQQFV 135
Query: 380 GTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFL 553
G + A + + ASPL + +I+++S E MPF + LS +++ + LYG++LR+ F+
Sbjct: 136 GAVSMASLISMFASPLAVMGVVIRSESVEFMPFYLSLSTFLMSASFALYGLLLRDFFI 193
>12_01_0501 + 3976156-3976292,3976364-3976949
Length = 240
Score = 50.0 bits (114), Expect = 2e-06
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 6/163 (3%)
Frame = +2
Query: 146 IKHKPILNLQYGYILRDDTMIQVNMFGLALNIIYVMIYFNYSQQKVKVWAQIGLA----- 310
IK+K + N + IL ++ +N L + +Y+ I+F +S +K K + LA
Sbjct: 34 IKNKNVQNFKADPIL----VVTINGISLVIEAVYLTIFFLFSDKKNKKKMGVVLATEALF 89
Query: 311 -GAVSAALIGYAQTEDPKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPII 487
AV+ ++ A T + + G + F + +SPL + +++ KS E MP +
Sbjct: 90 MAAVAVGVLLGAHTHQRRSLIV--GILCVIFGTIMYSSPLTIM--VVKTKSVEYMPLLLS 145
Query: 488 LSGTVVTFMWLLYGIILRNKFLVVQNVVALLLCGSQLSLFVIY 616
+ + W LY +I + F+ + N + +L QL L+ IY
Sbjct: 146 VVSFLNGLCWTLYALIRFDIFITIPNGLGVLFAIMQLILYAIY 188
>09_04_0680 -
19401891-19402049,19402556-19402928,19403385-19403421,
19403587-19403667,19405215-19405280,19407453-19407948,
19408050-19408283,19408473-19408772,19409241-19409423,
19410412-19410414
Length = 643
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/124 (22%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Frame = +2
Query: 203 MIQVNMFGLALNIIYVMIYFNYSQQKVKVWAQ-----IGLAGAVSAALIGYAQTEDPKLV 367
++ +N FG + Y+ +Y Y+ + ++ A + +A ++ A P V
Sbjct: 510 LLTINAFGCVVEAAYIAVYLVYAPRPARLRALTSFLLLNVAAFSLVVVVTVAAVAQPHRV 569
Query: 368 ETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNK 547
G+I AF + +P+ + +I+ KS E MPF + T+ W YG+ +
Sbjct: 570 RV-LGSICLAFSMAVFVAPMSVIMVVIKTKSAEFMPFSLSFFLTLSAVAWFFYGLFTNDL 628
Query: 548 FLVV 559
++ V
Sbjct: 629 YVTV 632
>01_05_0639 +
23873735-23873814,23873932-23874148,23874259-23874420,
23876037-23876357
Length = 259
Score = 47.2 bits (107), Expect = 1e-05
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Frame = +2
Query: 203 MIQVNMFGLALNIIYVMIYFNYSQQK--VKVWAQIG-----LAGAVSAALIGYAQTEDPK 361
++ +N GL + Y++I+F YS K +++ A +G + + L+G E
Sbjct: 72 VVTINGIGLLVEGTYLLIFFLYSPNKKRLRMCAVLGVELVFMLAVILGVLLGAHTHEKRS 131
Query: 362 LVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILR 541
++ G + F + SPL + ++I+ KS E MPF + L + W Y +I
Sbjct: 132 MI---VGILCVFFGSIMYFSPLTIMGKVIKTKSVEYMPFFLSLVCFLNGVCWTAYALIRF 188
Query: 542 NKFLVVQNVVALLLCGSQLSLFVIY 616
+ ++ + N + L QL L+ Y
Sbjct: 189 DIYVTIPNGLGALFGAIQLILYACY 213
Score = 32.7 bits (71), Expect = 0.30
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Frame = +2
Query: 356 PKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGI- 532
P G I F L +P+ I + K E L+ + +W+ YGI
Sbjct: 4 PDAARNVVGIIGNVISFGLFLAPVPTFWRICKRKDVEEFKADPYLATLLNCMLWVFYGIP 63
Query: 533 -ILRNKFLVVQ-NVVALLLCGSQLSLFVIY 616
+ N LVV N + LL+ G+ L +F +Y
Sbjct: 64 VVHPNSILVVTINGIGLLVEGTYLLIFFLY 93
>01_05_0637 +
23860857-23860936,23861057-23861273,23861388-23861549,
23862850-23863155
Length = 254
Score = 44.8 bits (101), Expect = 7e-05
Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 4/142 (2%)
Frame = +2
Query: 203 MIQVNMFGLALNIIYVMIYFNYSQQK--VKVWAQIGLAGA-VSAALIGYA-QTEDPKLVE 370
++ +N GL + Y+ I+F YS K +++ A +G+ + A ++G K
Sbjct: 72 VVTINGIGLIVEGTYLFIFFLYSPNKKRLRMLAVLGVELVFMLAVILGVLLSAHTHKKRS 131
Query: 371 TRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKF 550
G + F + SPL + ++I+ KS E MPF + L + W Y +I + +
Sbjct: 132 MIVGILCVFFGSIMYFSPLTIMGKVIKTKSVEYMPFFLSLVCFLNGVCWTAYALIRFDIY 191
Query: 551 LVVQNVVALLLCGSQLSLFVIY 616
+ + N + + QL L+ Y
Sbjct: 192 VTIPNGLGAIFGAIQLILYACY 213
Score = 33.1 bits (72), Expect = 0.23
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Frame = +2
Query: 356 PKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYG-- 529
P G I F L SP+ I + K E L+ + +W+ YG
Sbjct: 4 PDAARNVVGIIGNVISFGLFLSPVPTFWRICKRKDVEQFKADPYLATLLNCMLWVFYGIP 63
Query: 530 IILRNKFLVVQ-NVVALLLCGSQLSLFVIY 616
I+ N LVV N + L++ G+ L +F +Y
Sbjct: 64 IVHPNSILVVTINGIGLIVEGTYLFIFFLY 93
>09_02_0083 + 4081564-4081677,4081853-4082359
Length = 206
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/79 (27%), Positives = 40/79 (50%)
Frame = +2
Query: 380 GTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFLVV 559
G + F + +SPL + ++++ KS E MP + + + W Y +I + F+ +
Sbjct: 77 GILCVIFDTIMYSSPLTVMSQVVKTKSVEYMPLLLSVVSFLNGLYWTSYTLIRFDIFITI 136
Query: 560 QNVVALLLCGSQLSLFVIY 616
N + +L QL L+VIY
Sbjct: 137 PNGLGVLFAAVQLILYVIY 155
>09_02_0106 +
4347024-4347536,4349619-4349700,4350499-4350747,
4351594-4351646,4353064-4353159,4353289-4353423
Length = 375
Score = 36.3 bits (80), Expect = 0.025
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +2
Query: 356 PKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYG-- 529
P L+ G + F L SP+ II+NK + L+ + +W+ YG
Sbjct: 4 PDLIRNMVGIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKADPYLATLLNCMLWVFYGLP 63
Query: 530 IILRNKFLVVQ-NVVALLLCGSQLSLFVIY 616
I+ N LVV N + L++ L++F ++
Sbjct: 64 IVHPNSILVVTINGIGLVIEAVYLTIFFLF 93
Score = 35.9 bits (79), Expect = 0.033
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Frame = +2
Query: 203 MIQVNMFGLALNIIYVMIYFNYSQQKVK-------VWAQIGLAGAVSAALIGYAQTEDPK 361
++ +N GL + +Y+ I+F +S +K K + +A V L+G +
Sbjct: 72 VVTINGIGLVIEAVYLTIFFLFSDKKNKKKMGVVLATEALFMAAVVLGVLLGAHTHQRRS 131
Query: 362 LVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMP 475
L+ G + F + +SPL + ++++ KS E MP
Sbjct: 132 LI---VGILCVIFGTIMYSSPLTIMSQVVKTKSVEYMP 166
>09_02_0096 - 4221935-4222231
Length = 98
Score = 34.7 bits (76), Expect = 0.075
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +2
Query: 356 PKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYG-- 529
P L+ G + A F L SP+ II+ K + L+ + +W+ YG
Sbjct: 4 PDLIRNVVGIVGNAISFGLFLSPVLTFWRIIKEKDMKYFKADPYLATLLNCMLWVFYGLP 63
Query: 530 IILRNKFLVVQ-NVVALLLCGSQLSLFVIY 616
I+ N LVV N + L++ L++F ++
Sbjct: 64 IVHPNSILVVTINGIGLVIEAVYLTIFFLF 93
>09_06_0252 +
21867179-21867283,21868362-21868526,21868621-21868730,
21868802-21868904,21868998-21869110,21869204-21869357,
21869476-21870633
Length = 635
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 621 DGYITKSDSCDPHSNKATT 565
DG T+ +CDPH+NK T
Sbjct: 209 DGVNTRLSTCDPHANKLVT 227
>10_08_0151 -
15229235-15229243,15230032-15230103,15230369-15230459,
15230553-15230695,15231910-15232022,15232171-15232315
Length = 190
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -1
Query: 663 FLAFTFDLSLPFGLDGYITKSDSCDPHSNKATTFCTTKNLFLNIIPYSSH 514
F F L + GLD Y + H++ TF L L+ +P+ SH
Sbjct: 44 FYQRAFTLRIRLGLDQYSIGDFDLEYHTDFNFTFAPIYTLILHDLPFHSH 93
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,883,410
Number of Sequences: 37544
Number of extensions: 334696
Number of successful extensions: 769
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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