Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_F09
(693 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47910| Best HMM Match : No HMM Matches (HMM E-Value=.) 203 9e-53
SB_47911| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 1e-16
SB_48080| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_50155| Best HMM Match : SPRY (HMM E-Value=7.7e-14) 44 2e-04
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 42 4e-04
SB_9490| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_29554| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_55816| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_17539| Best HMM Match : Cu2_monoox_C (HMM E-Value=1e-24) 33 0.17
SB_14887| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_13242| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_17130| Best HMM Match : RVT_1 (HMM E-Value=0.0013) 33 0.22
SB_40280| Best HMM Match : C2 (HMM E-Value=1.8e-05) 31 0.89
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_31769| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_14150| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_5993| Best HMM Match : EGF_2 (HMM E-Value=9e-14) 28 6.2
SB_24674| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_47910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 203 bits (496), Expect = 9e-53
Identities = 86/106 (81%), Positives = 97/106 (91%)
Frame = +1
Query: 364 LPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCGVNLVDNTCFYTKNGHHLGI 543
LP W+K+SYGYHGDDGHSFCSSGTG+PYGPTFTTGDVIGCG+NL+DNTCFYTKNG +LGI
Sbjct: 81 LPRWEKNSYGYHGDDGHSFCSSGTGKPYGPTFTTGDVIGCGLNLIDNTCFYTKNGVNLGI 140
Query: 544 AFRGLPPNLYPTVGLQTPGEVVDTNFGQQPFVFDIEDMLKELRART 681
AFR LPPNLYPTVGLQTPGEVVD NFGQ PFV++IE+ +KE+ T
Sbjct: 141 AFRDLPPNLYPTVGLQTPGEVVDANFGQLPFVYNIEEEMKEISTFT 186
>SB_47911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 83.8 bits (198), Expect = 1e-16
Identities = 35/57 (61%), Positives = 46/57 (80%)
Frame = +1
Query: 67 SDTVDRLKLLYPNVNEEETPLPRAWSTKDKFSYIGLSQNNLRVHYKGHGKTHRDAAS 237
S +D++ LLYP V+E ETPLPR+WS KDKF++IGLSQNNLRVHYK G +++ A+
Sbjct: 9 SSQLDQISLLYPKVDETETPLPRSWSPKDKFTFIGLSQNNLRVHYKERGSKYKENAN 65
>SB_48080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 44.0 bits (99), Expect = 1e-04
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 9/156 (5%)
Frame = +1
Query: 250 HPIPAACGLYYFEVRIVSKG--RDGYMGIGLSAHGVNMNRLPGWDKHSYGYHGDDGHSFC 423
H I + L +V S G + G+ G SA + + G D HS+ Y G +
Sbjct: 98 HAIKKSTSLIQLKVLTFSGGYMQLGWADDGFSA-AADTGQGCGDDSHSWAYDGTRTLKWH 156
Query: 424 SSGTGQPYGPTFTTGDVIGCGVNLVDNTCFYTKNG---HHLGIAFRGLPPN--LYPTVGL 588
++ +PYG + GD +G V+L ++ NG +G AF G+ P+ +YP + L
Sbjct: 157 ANAK-EPYGRKWKEGDTVGIAVDLDQGEVSFSLNGDWSSPMGTAFTGITPDGGIYPCLSL 215
Query: 589 QTPGEVVDTNFG--QQPFVFDIEDMLKELRARTXVA 690
G+ V + G PF ++ + LR VA
Sbjct: 216 -IRGQRVSVHLGTPSNPFDYNPPEGYLPLRVTQPVA 250
>SB_50155| Best HMM Match : SPRY (HMM E-Value=7.7e-14)
Length = 453
Score = 43.6 bits (98), Expect = 2e-04
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = +1
Query: 328 IGLSAHGVNMNRLPGWDKHSYGYHGDDGHSFCS-SGTGQPYGPTFTTGDVIGCGVNL-VD 501
+G S N+ G D SYGY G + CS S YG +++ D+I C ++L
Sbjct: 15 VGWSVDSANLQ--VGEDALSYGYGGT---AKCSVSNKFFDYGERYSSNDIITCYIDLDAS 69
Query: 502 NTC-FYTKNGHHLGIAFRGLPPNLY 573
C F+ KNG +LG+AFR L P Y
Sbjct: 70 PKCIFFAKNGLYLGVAFR-LGPEAY 93
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/86 (30%), Positives = 40/86 (46%)
Frame = +1
Query: 271 GLYYFEVRIVSKGRDGYMGIGLSAHGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYG 450
G YY+E + +G +G S ++ G D+ +G+ G S+ + YG
Sbjct: 33 GKYYYEATVTD---EGLCRVGWSTAHATLDL--GTDEEGFGFGGTGKKSY--NRQFDTYG 85
Query: 451 PTFTTGDVIGCGVNLVDNTCFYTKNG 528
F D IGC +NL + T Y+KNG
Sbjct: 86 EPFGINDTIGCYINLDNGTVKYSKNG 111
>SB_9490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 322 MGIGLSAHGVNMNRLPGWDKHSYGYHGDDGHSF 420
+ +GL + G N++ PGW ++ GYH DDG F
Sbjct: 12 LAVGLVSRGYNLHLFPGWQSNTVGYHVDDGKVF 44
>SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3408
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +1
Query: 466 GDVIGCGVNLVDNTC-----FYTKNGHHLGIAFRGLPPNLYPTVGLQTPGEVVDTNFGQQ 630
G VIGCG + D+ ++T NG L + + L+P V LQ V NFG +
Sbjct: 2246 GHVIGCGYSRTDSRSDTGLVYFTHNGQRLHGSLGNVSAGLWPVVHLQKKDVRVRVNFGTR 2305
Query: 631 PFVF 642
PF++
Sbjct: 2306 PFMY 2309
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 232 ASVRATHPIPAACGLYYFEVRIVSKGRDGYMGIGLSAHGVNMNRLP 369
A V A+ P+P YY+EV IVS G G G +++ P
Sbjct: 2105 AYVYASSPLPLKAPSYYWEVEIVSLGEQGTGDYGAGIQAISVGLAP 2150
>SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +1
Query: 319 YMGIGLSAHGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCGVNLV 498
++ +G S+ N+ G SYG+ D C++ +G TFT GDVI C ++L
Sbjct: 345 FVRVGWSSDSANLQL--GEVALSYGF--DSTGKKCTNNEFTEFGQTFTAGDVITCYLDLE 400
Query: 499 DN--TCFYTKNGHHLGIAF 549
+ ++KNG LG AF
Sbjct: 401 SSPKQISFSKNGEDLGSAF 419
>SB_29554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 33.9 bits (74), Expect = 0.13
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 11/115 (9%)
Frame = +1
Query: 265 ACGLYYFEVRIVS-KGRDGYMGIGLS---AHGVNMN--RLPGWDKHSYG--YHGDDGHSF 420
A G +Y+E+++ +G +G+ H N L G D+ S+G + G+ H
Sbjct: 119 AHGQHYWEIKLTDVRGTSMMIGVATQDAMLHTDNYEYVNLVGRDQESWGLSHRGEIWHG- 177
Query: 421 CSSGTGQPYGPTFTTGDVIGCGVNLVDNTCFYTKNGHHLGIAFRGLPP---NLYP 576
G + F VIG +++ T + KNG LG+AF GL LYP
Sbjct: 178 ---GQKWKFCEPFFDSTVIGVLLDMDKGTISFFKNGQPLGVAFTGLQDRGCELYP 229
>SB_55816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +1
Query: 457 FTTGDVIGCGVNLVDNTCFYTKNGHHLGIAFRGL-PPNLYPTVGL--QTPGEVV 609
+T GD + C +++ T + KNG +AF G+ +YP V TPGE V
Sbjct: 381 YTQGDFLTCVLDMEARTLAFGKNGEEPRVAFEGIDATEVYPCVMFYSNTPGEKV 434
>SB_17539| Best HMM Match : Cu2_monoox_C (HMM E-Value=1e-24)
Length = 723
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -1
Query: 387 GMLVPPG-QSVHVDSMCGQSDPHVPVPSFRYDSNLEVVEPTRGGYRM 250
G+ VPP Q VHVD C D H P+ +F Y ++ + GYR+
Sbjct: 158 GLWVPPDTQEVHVDLACKYQDDH-PIYAFAYRTHAHGLGRVISGYRV 203
>SB_14887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 876
Score = 33.5 bits (73), Expect = 0.17
Identities = 38/111 (34%), Positives = 47/111 (42%), Gaps = 10/111 (9%)
Frame = +1
Query: 286 EVRIVSK--GRDGYMGIGLSAHGVNMNRLPGWDKH-SYGYHGDDGHSFCSSGTG--QPYG 450
EVRI K G M IG++ +M +P GY G S +GT YG
Sbjct: 51 EVRIDRKITNWSGSMAIGVTTANPSMIEIPSSATGLKNGYWIMSGMSVVKNGTAILDSYG 110
Query: 451 PTF---TTGDVIGCGVNLVDNTC--FYTKNGHHLGIAFRGLPPNLYPTVGL 588
T GD +G V + C FY NG LG+A +P NLY V L
Sbjct: 111 TDLDELTEGDRVG--VRRTGDGCLHFYV-NGKDLGVAASEIPGNLYGVVDL 158
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 433 TGQPY--GPTFTTGDVIGCGVNLVDNTCFYTKNGHHLGIAFRGLPPNLYPTVGL 588
T QP F GD +G + D T + NG +G+A +PP ++ V L
Sbjct: 223 TNQPLRDNELFEAGDKVGI-LKTADGTVSFYLNGVCMGVAADDIPPGVFGVVDL 275
>SB_13242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 33.1 bits (72), Expect = 0.22
Identities = 25/85 (29%), Positives = 37/85 (43%)
Frame = +1
Query: 1 GKSEMAAIGSGRGTMDSQNQVQSDTVDRLKLLYPNVNEEETPLPRAWSTKDKFSYIGLSQ 180
G E+ + S + DS +Q + + L P E + S KDK S++GLS+
Sbjct: 22 GSQEVVIVDSPKDLKDSVSQSKQQPAVQ-GLQGPMFRREFKIVGAVGSEKDKLSFVGLSR 80
Query: 181 NNLRVHYKGHGKTHRDAASVRATHP 255
KGH +T A +RA P
Sbjct: 81 QIDSGLAKGHSETELVDAVIRAIAP 105
>SB_17130| Best HMM Match : RVT_1 (HMM E-Value=0.0013)
Length = 994
Score = 33.1 bits (72), Expect = 0.22
Identities = 25/85 (29%), Positives = 37/85 (43%)
Frame = +1
Query: 1 GKSEMAAIGSGRGTMDSQNQVQSDTVDRLKLLYPNVNEEETPLPRAWSTKDKFSYIGLSQ 180
G E+ + S + DS +Q + + L P E + S KDK S++GLS+
Sbjct: 93 GSQEVVIVDSPKDLKDSVSQSKQQPAVQ-GLQGPMFRREFKIVGAVGSEKDKLSFVGLSR 151
Query: 181 NNLRVHYKGHGKTHRDAASVRATHP 255
KGH +T A +RA P
Sbjct: 152 QIDSGLAKGHSETELVDAVIRAIAP 176
>SB_40280| Best HMM Match : C2 (HMM E-Value=1.8e-05)
Length = 485
Score = 31.1 bits (67), Expect = 0.89
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 310 RDGYMGIGLSAHGVNMNRLPGW-DKHSYGYHGDDGHSFCSSGT 435
R GY G HG + + PG+ DK +GY GD + S T
Sbjct: 148 RHGYKGE--QKHGFEIEQRPGYEDKQKFGYEGDKSPDYKDSAT 188
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/97 (28%), Positives = 39/97 (40%)
Frame = +1
Query: 190 RVHYKGHGKTHRDAASVRATHPIPAACGLYYFEVRIVSKGRDGYMGIGLSAHGVNMNRLP 369
++H KG + A P G Y R GR GY G G
Sbjct: 173 KIHVKGKMVEAKKATPRDRNSPADGGRGGYGGRGR-GGGGRGGYGG------GGGYGGYG 225
Query: 370 GWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIG 480
G+D++S G +G G S+ S G G YG ++ + D G
Sbjct: 226 GYDQYSGGGYGGYGDSYGSYGGGGGYGSSYGSYDGYG 262
>SB_31769| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 293
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +1
Query: 370 GWD-KHSYGYHGDDGHSFCS-SGTGQPYGPTFTTGDVIGCGVNLVDNT-CFYTKNGHHLG 540
GWD + YH + G+S F D +++ + T F T G +LG
Sbjct: 147 GWDIVRNKLYHDEKGNSTVKYPAHNADIEHNFVVPDRFRVILDMDEGTLAFETLEGKYLG 206
Query: 541 IAFRGLP-PNLYPTV 582
+AFRGL +YP V
Sbjct: 207 VAFRGLKGQTVYPVV 221
>SB_14150| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 429
Score = 28.7 bits (61), Expect = 4.7
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +1
Query: 307 GRDGYMGIGLSAHGVNMNRLPGWD-KHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGC 483
G DG G G G N G D + GY G DG+ C +G YG + GC
Sbjct: 148 GCDGNYGYGYGCDG-NYGCGYGCDGNYGCGY-GCDGNYGCGNGCDGNYGCGYGCDGNYGC 205
Query: 484 GVNLVDN-TCFYTKNGHH 534
G N C Y +G++
Sbjct: 206 GYGCDGNYGCGYGCDGNY 223
>SB_5993| Best HMM Match : EGF_2 (HMM E-Value=9e-14)
Length = 360
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 295 IVSKGRDGYMGIGLSAHGVNMNRLPG 372
+ +K D Y+ + +SA VNMN PG
Sbjct: 66 VTTKAGDAYVSLDISAPSVNMNAPPG 91
>SB_24674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 578
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +1
Query: 97 YPNVNEEETPLPRAWSTKDKFSYIGLSQNNLRVHYKGHGKTHRDAA 234
Y N + +TP R+ ST+ +FSY ++ H+ G+ + D++
Sbjct: 508 YGNCCQGDTPSVRSVSTQCEFSYDSQDYDDYDGHHSGYASSSDDSS 553
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,670,179
Number of Sequences: 59808
Number of extensions: 529567
Number of successful extensions: 1698
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1695
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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