Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_F09
         (693 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    27   0.56 
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    25   1.7  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    24   5.2  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       24   5.2  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           23   6.9  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   9.1  

>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 27.1 bits (57), Expect = 0.56
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 391 GYHGDDGHSFCSSGTGQPYGPTFTTGDV 474
           G  G  GH  C++ +G P+GP + T +V
Sbjct: 121 GLDGSTGHG-CNAKSGNPFGPFWDTFEV 147


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 547 FRGLPPNLYPTVGLQTPGEVVDTNFGQQ 630
           F   PP L P VGLQ+   + +TN   Q
Sbjct: 404 FPPTPPQLSPGVGLQSQNNLSNTNRSPQ 431


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 12/48 (25%), Positives = 27/48 (56%)
 Frame = +2

Query: 167 SDCRKIIYECIIKVMVRLTETRPASGQHIRYPPRVGSTTSRLESYLKD 310
           SD  ++I+   +  ++R++  RP     + YPP   S +S  +++++D
Sbjct: 344 SDWVRVIFLYWLPCILRMS--RPGRDLSMEYPPTPTSDSSERKAHIQD 389


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +1

Query: 556 LPPNLYPTVGLQTPGEVVDTNFGQQP 633
           +PP++ PT     PG    T  G  P
Sbjct: 409 MPPSVAPTTSTVAPGTTTTTPTGANP 434


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 474 HRMWS*LGRQHVL 512
           H +W+ LGRQH+L
Sbjct: 375 HVLWNKLGRQHML 387


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 17/56 (30%), Positives = 21/56 (37%)
 Frame = +3

Query: 465  RRRHRMWS*LGRQHVLLHQEWTSFRNCFQRTTAKFISDSRPSDARRGGGHELRSAA 632
            RRR   W    RQ ++ +      R  F        SD  P D  RGG    + AA
Sbjct: 1150 RRRVARWR--ERQRMIRNGGIQMLRALFGHDAWSSESDDEPDDVERGGLDAAQQAA 1203


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 774,563
Number of Sequences: 2352
Number of extensions: 17598
Number of successful extensions: 36
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)