Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_F09
(693 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032643-5|CAA21656.1| 622|Caenorhabditis elegans Hypothetical ... 182 2e-46
U53150-10|AAA96130.3| 433|Caenorhabditis elegans Hypothetical p... 58 5e-09
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 53 2e-07
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 47 1e-05
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 47 1e-05
AL023828-3|CAA19468.1| 572|Caenorhabditis elegans Hypothetical ... 47 1e-05
AL023828-2|CAA19449.1| 570|Caenorhabditis elegans Hypothetical ... 47 1e-05
U13875-10|AAA21159.1| 332|Caenorhabditis elegans F-box synaptic... 36 0.027
Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical p... 33 0.19
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 33 0.19
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 33 0.19
AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical ... 32 0.45
Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF002198-9|AAF99936.1| 450|Caenorhabditis elegans Hypothetical ... 29 2.4
U50071-6|AAQ91911.1| 1004|Caenorhabditis elegans Uncoordinated p... 29 4.2
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 29 4.2
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 29 4.2
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 29 4.2
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 29 4.2
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 29 4.2
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 29 4.2
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 29 4.2
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 29 4.2
Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical pr... 28 5.5
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 28 5.5
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 28 5.5
Z82073-3|CAB04926.1| 631|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical pr... 28 7.3
>AL032643-5|CAA21656.1| 622|Caenorhabditis elegans Hypothetical
protein Y54E5A.7 protein.
Length = 622
Score = 182 bits (444), Expect = 2e-46
Identities = 96/207 (46%), Positives = 123/207 (59%), Gaps = 7/207 (3%)
Frame = +1
Query: 52 QNQVQSDTVDRLKLLYPNVNEEETP--LPRAWSTKDKFSYIGLSQNNLRVHYKGHGKTHR 225
+NQ +T L+ LYP + E E +PR W + SY+ +SQ+ V +K +
Sbjct: 16 KNQDPHETNLALRRLYPQIRERENERHIPRRWDLRQASSYLDISQSGYGVTFKKNVTVAE 75
Query: 226 D---AASVRATHPIPAACGLYYFEVRIVSKGRDGYMGIGLSAHGVNMNRLPGWDKHSYGY 396
D A VRA I G+YYFEVRI+ +G G MGIGLS ++NR+PGWD +GY
Sbjct: 76 DKDPAGVVRADAFIQQCIGVYYFEVRIL-EGHSGCMGIGLSKKDCDLNRMPGWDPGCFGY 134
Query: 397 HGDDGHSFCSSGTGQPYGPTFTTGDVIGCGVNLVDNTCFYTKNGHHLGIAFRG--LPPNL 570
HGDDG+ F +SG GQ YGP F GDVIGCG++ + F+TKNG HLGIA L
Sbjct: 135 HGDDGNFFLASGVGQAYGPKFGPGDVIGCGIDTFYHYVFFTKNGKHLGIAHTSPTALKEL 194
Query: 571 YPTVGLQTPGEVVDTNFGQQPFVFDIE 651
YPTVG +T GE + NFG +PF FD E
Sbjct: 195 YPTVGFKTRGEKLVANFGVKPFEFDFE 221
>U53150-10|AAA96130.3| 433|Caenorhabditis elegans Hypothetical
protein F20A1.9 protein.
Length = 433
Score = 58.4 bits (135), Expect = 5e-09
Identities = 46/130 (35%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Frame = +1
Query: 271 GLYYFEVRIVSKGRDGYMGIGLSAHGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYG 450
G YY+EV I SKG +G + G ++N G D S+GY G S + YG
Sbjct: 50 GKYYYEVTITSKG---LCRVGWATLGGSLNIGKGLD--SFGYGGTGMKS--THKKFDDYG 102
Query: 451 PTFTTGDVIGCGVNLVDNTCFYTKNGHHLGIAF------RGLPPNLYPTVGLQTPGEVVD 612
FT DVIGC ++L T +++KNG AF + L+P V Q +
Sbjct: 103 LPFTLNDVIGCYLDLDSRTIWWSKNGEQFPAAFSIDVKYKNSNTCLFPAVLCQNSS--LS 160
Query: 613 TNFGQQPFVF 642
NFG QPF F
Sbjct: 161 VNFGSQPFKF 170
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Frame = +1
Query: 271 GLYYFEVRIVSKGRDGYMGIGLSAHGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYG 450
G YY+EV + RDG +G + ++ G D S+GY G SF YG
Sbjct: 128 GKYYYEVTVT---RDGLCRVGWATLSGSLKI--GTDFESFGYGGTGKKSFGKKF--DDYG 180
Query: 451 PTFTTGDVIGCGVNLVDNTCFYTKNGHHLGIA------FRGLPPNLYPTVGLQTPGEVVD 612
+FTT DV+GC ++L + +++KNG +A F+ LYP + Q G +
Sbjct: 181 TSFTTNDVLGCFLDLDELKIWWSKNGVQFPVAYQIDKKFKTAATCLYPAILCQNSG--LG 238
Query: 613 TNFG 624
NFG
Sbjct: 239 VNFG 242
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +1
Query: 262 AACG-LYYFEVRIVSKGRDGYMGIGLSAHGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTG 438
A CG +YFE I++ G YM IG G G D SY + G G +
Sbjct: 966 AVCGGKWYFEFEILTAG---YMKIGWMDIGSTPEIQLGADDRSYAFDGYLGRKWHQGA-- 1020
Query: 439 QPYGPTFTTGDVIGCGVNLVDNTCFYTKNGHHL 537
+ YG + GDV+GC ++L D T ++ NG L
Sbjct: 1021 ETYGKEWKIGDVVGCFLDLNDRTISFSLNGELL 1053
Score = 32.7 bits (71), Expect = 0.26
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 370 GWDKHSYGYHGDDGHSFCSSGTGQPYG-PTFTTGDVIGCGVNLVDNTCFYTKNGHHLGIA 546
G D +SYG+ DG S G + G GDVIGC ++L ++ NG ++ +
Sbjct: 595 GDDFYSYGF---DGKSMYFGGKSRRVGHKLLEKGDVIGCSIDLTIPEIKFSVNGTYMSGS 651
Query: 547 FR 552
F+
Sbjct: 652 FK 653
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +1
Query: 262 AACG-LYYFEVRIVSKGRDGYMGIGLSAHGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTG 438
A CG +YFE I++ G YM IG G G D SY + G G +
Sbjct: 1087 AVCGGKWYFEFEILTAG---YMKIGWMDIGSTPEIQLGADDRSYAFDGYLGRKWHQGA-- 1141
Query: 439 QPYGPTFTTGDVIGCGVNLVDNTCFYTKNGHHL 537
+ YG + GDV+GC ++L D T ++ NG L
Sbjct: 1142 ETYGKEWKIGDVVGCFLDLNDRTISFSLNGELL 1174
Score = 32.7 bits (71), Expect = 0.26
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 370 GWDKHSYGYHGDDGHSFCSSGTGQPYG-PTFTTGDVIGCGVNLVDNTCFYTKNGHHLGIA 546
G D +SYG+ DG S G + G GDVIGC ++L ++ NG ++ +
Sbjct: 716 GDDFYSYGF---DGKSMYFGGKSRRVGHKLLEKGDVIGCSIDLTIPEIKFSVNGTYMSGS 772
Query: 547 FR 552
F+
Sbjct: 773 FK 774
>AL023828-3|CAA19468.1| 572|Caenorhabditis elegans Hypothetical
protein Y17G7B.2b protein.
Length = 572
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/85 (30%), Positives = 43/85 (50%)
Frame = +1
Query: 241 RATHPIPAACGLYYFEVRIVSKGRDGYMGIGLSAHGVNMNRLPGWDKHSYGYHGDDGHSF 420
RA+H + G +YFEV + D ++ IG S ++ G++K SYG+ G F
Sbjct: 331 RASHGVSK--GTWYFEVNFDDQPDDSHIRIGWSQSYASLQACVGYNKFSYGWRSKHGTKF 388
Query: 421 CSSGTGQPYGPTFTTGDVIGCGVNL 495
+ + + F GDV+GC ++L
Sbjct: 389 HEAKGKKYHFGGFKQGDVLGCLIHL 413
>AL023828-2|CAA19449.1| 570|Caenorhabditis elegans Hypothetical
protein Y17G7B.2a protein.
Length = 570
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/85 (30%), Positives = 43/85 (50%)
Frame = +1
Query: 241 RATHPIPAACGLYYFEVRIVSKGRDGYMGIGLSAHGVNMNRLPGWDKHSYGYHGDDGHSF 420
RA+H + G +YFEV + D ++ IG S ++ G++K SYG+ G F
Sbjct: 329 RASHGVSK--GTWYFEVNFDDQPDDSHIRIGWSQSYASLQACVGYNKFSYGWRSKHGTKF 386
Query: 421 CSSGTGQPYGPTFTTGDVIGCGVNL 495
+ + + F GDV+GC ++L
Sbjct: 387 HEAKGKKYHFGGFKQGDVLGCLIHL 411
>U13875-10|AAA21159.1| 332|Caenorhabditis elegans F-box synaptic
protein protein 1 protein.
Length = 332
Score = 35.9 bits (79), Expect = 0.027
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Frame = +1
Query: 343 HGVNMNRLPGWDKHSYGYHGDDG---HSFCSSGTGQPYG--PTFTTGDVIGCGVNLVDNT 507
H V L G D S+G++ D H+ G P + GD I ++ +
Sbjct: 227 HCVGYVALLGSDDQSWGWNLVDNVLMHNGAQLGVYPKMNNPPKYEVGDKIRLIIDCDTHV 286
Query: 508 CFYTKNGHHLGIAFRGLPP-NLYPTV 582
++ +N LGIAF +PP LYP V
Sbjct: 287 AYFERNSEFLGIAFNHIPPLRLYPAV 312
>Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical
protein Y41E3.11 protein.
Length = 917
Score = 33.1 bits (72), Expect = 0.19
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 9/163 (5%)
Frame = +1
Query: 169 GLSQN-NLRVHYKGHGK--THRDAASVRATHPIPAACGLYYFEVRIVSKGRDGYMGIGL- 336
G+ N +++ +K GK +HR A ++ I + + + ++ G D +G L
Sbjct: 229 GIRSNFGIKLPFKQTGKDASHRLAFQIQ----IDSYQSIQHLPTEFMADGGDVRIGFSLA 284
Query: 337 SAHGVNMNRLPG-WDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCGVNLVDNTCF 513
S + + PG W + G + H +G F GDV+ C +L T
Sbjct: 285 STASLILGESPGSWCISASGKRAANNHF-------SDFGKLFDIGDVVTCIFDLSVGTIS 337
Query: 514 YTKNGHHLGIAFRGLP----PNLYPTVGLQTPGEVVDTNFGQQ 630
Y NG ++G F L ++PT+ T ++ N GQ+
Sbjct: 338 YQINGENVGSPFESLQFREGDVIFPTI--CTKNANINVNMGQE 378
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/61 (22%), Positives = 33/61 (54%)
Frame = +1
Query: 49 SQNQVQSDTVDRLKLLYPNVNEEETPLPRAWSTKDKFSYIGLSQNNLRVHYKGHGKTHRD 228
SQ++ Q ++ ++++++ P V E +P P++ ++K ++ R + G HRD
Sbjct: 1427 SQSETQKESPEKVRVVVPKVEVERSPSPKSSRDREKDREKSREKDRERDRDRREGSKHRD 1486
Query: 229 A 231
+
Sbjct: 1487 S 1487
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/61 (22%), Positives = 33/61 (54%)
Frame = +1
Query: 49 SQNQVQSDTVDRLKLLYPNVNEEETPLPRAWSTKDKFSYIGLSQNNLRVHYKGHGKTHRD 228
SQ++ Q ++ ++++++ P V E +P P++ ++K ++ R + G HRD
Sbjct: 1441 SQSETQKESPEKVRVVVPKVEVERSPSPKSSRDREKDREKSREKDRERDRDRREGSKHRD 1500
Query: 229 A 231
+
Sbjct: 1501 S 1501
>AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical
protein C39F7.2 protein.
Length = 765
Score = 31.9 bits (69), Expect = 0.45
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Frame = +1
Query: 271 GLYYFEVRIVSKGRDGYMGIGLSAHGVNMNRLPGWDKHSYGYHGDDGHSFC---SSGTGQ 441
G++Y+EV I + + IG++ VN N + G D H + + D S+ + +
Sbjct: 635 GVHYWEVTIDRHDGNSDIVIGVAQPAVNRNVMLGKDLHGWSMYVDGERSWYLHNETHHNR 694
Query: 442 PYGPTFTTGDVIGCGVNLVDNTCFYTKNGHHL-----GIAFRGLPPNLY 573
G T G VIG ++ T YT N +AF +P LY
Sbjct: 695 VLGGV-TRGTVIGVRLDCDRGTMEYTVNDRKRIYQDDSMAFTNMPRGLY 742
>Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical
protein F38B7.3 protein.
Length = 407
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 325 GIGLSAHGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCGV 489
G+ S+H + R G+ YG +G G F S+G G +G G ++G G+
Sbjct: 212 GVPTSSHTTVIVRDGGYGGGGYGGYGGGGGGFGSTGLG--FGSGILAGSLLGYGL 264
>AF002198-9|AAF99936.1| 450|Caenorhabditis elegans Hypothetical
protein F35F10.11 protein.
Length = 450
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 94 LYPNVNEEETPLPRAWSTKD 153
LYPNVN+E+ P P TKD
Sbjct: 378 LYPNVNDEKVPNPNEDPTKD 397
>U50071-6|AAQ91911.1| 1004|Caenorhabditis elegans Uncoordinated
protein 44, isoform g protein.
Length = 1004
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 345 MCGQSDPHVPVPSFRYDSNLEVVEPTRGGY 256
+C Q D HVPV Y++ E+ T GY
Sbjct: 695 LCAQED-HVPVAQILYNNGAEINSKTNAGY 723
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 345 MCGQSDPHVPVPSFRYDSNLEVVEPTRGGY 256
+C Q D HVPV Y++ E+ T GY
Sbjct: 695 LCAQED-HVPVAQILYNNGAEINSKTNAGY 723
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 345 MCGQSDPHVPVPSFRYDSNLEVVEPTRGGY 256
+C Q D HVPV Y++ E+ T GY
Sbjct: 695 LCAQED-HVPVAQILYNNGAEINSKTNAGY 723
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 345 MCGQSDPHVPVPSFRYDSNLEVVEPTRGGY 256
+C Q D HVPV Y++ E+ T GY
Sbjct: 695 LCAQED-HVPVAQILYNNGAEINSKTNAGY 723
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 345 MCGQSDPHVPVPSFRYDSNLEVVEPTRGGY 256
+C Q D HVPV Y++ E+ T GY
Sbjct: 695 LCAQED-HVPVAQILYNNGAEINSKTNAGY 723
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 345 MCGQSDPHVPVPSFRYDSNLEVVEPTRGGY 256
+C Q D HVPV Y++ E+ T GY
Sbjct: 695 LCAQED-HVPVAQILYNNGAEINSKTNAGY 723
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 345 MCGQSDPHVPVPSFRYDSNLEVVEPTRGGY 256
+C Q D HVPV Y++ E+ T GY
Sbjct: 695 LCAQED-HVPVAQILYNNGAEINSKTNAGY 723
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 345 MCGQSDPHVPVPSFRYDSNLEVVEPTRGGY 256
+C Q D HVPV Y++ E+ T GY
Sbjct: 695 LCAQED-HVPVAQILYNNGAEINSKTNAGY 723
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 345 MCGQSDPHVPVPSFRYDSNLEVVEPTRGGY 256
+C Q D HVPV Y++ E+ T GY
Sbjct: 695 LCAQED-HVPVAQILYNNGAEINSKTNAGY 723
>Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical
protein T28F4.4 protein.
Length = 717
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 667 VPSACPRCRKRTAADRSSCPPPRRASEGRLSDIN 566
VPS A+ SS P P+R+SEG L D++
Sbjct: 247 VPSPSYSFPSSVASSASSSPAPQRSSEGILDDLS 280
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Frame = -1
Query: 387 GMLVPPGQSV----HVDSMCGQSDPHVPVPSFRYDSNLEVVEPTRGGY 256
G PPG S H S CG + P S D+N E +P RGGY
Sbjct: 264 GPFGPPGDSGEPGGHCPSSCGVQEIVAPSVS-ELDTNDEPEKPARGGY 310
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Frame = -1
Query: 387 GMLVPPGQSV----HVDSMCGQSDPHVPVPSFRYDSNLEVVEPTRGGY 256
G PPG S H S CG + P S D+N E +P RGGY
Sbjct: 264 GPFGPPGDSGEPGGHCPSSCGVQEIVAPSVS-ELDTNDEPEKPARGGY 310
>Z82073-3|CAB04926.1| 631|Caenorhabditis elegans Hypothetical
protein W06D12.5 protein.
Length = 631
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +1
Query: 358 NRLPGWDKHSYGYHGDDGHSFCSSGT-GQPYGPTFTTGD 471
N+LPG +H H D F S G G+P PT D
Sbjct: 161 NKLPGRLQHRLSVHTDAASRFSSPGAMGEPVVPTLRRFD 199
>Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical
protein T23D8.9a protein.
Length = 811
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 315 RVHGDRTVRTWSQHEQIARVGQA 383
R+H +T+RTW + ++ A+V QA
Sbjct: 202 RLHMAKTIRTWIRQDKFAQVDQA 224
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,952,230
Number of Sequences: 27780
Number of extensions: 382012
Number of successful extensions: 1310
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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