Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_F08
         (756 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    27   0.21 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    27   0.21 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    27   0.21 
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      23   2.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   4.6  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   6.1  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   6.1  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 19/49 (38%), Positives = 24/49 (48%)
 Frame = +1

Query: 28  CYAFGFXSCKLXHLSPQXTWRSNLSCCY*A*SGMELMRLCGAWRRTHTS 174
           CYAFG  SCK+   S    +  NLS      SG  L+ +CG + R   S
Sbjct: 145 CYAFGKFSCKVMIQSVSFAFPINLSVPV-LLSG--LIAMCGMYYRDECS 190


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 19/49 (38%), Positives = 24/49 (48%)
 Frame = +1

Query: 28  CYAFGFXSCKLXHLSPQXTWRSNLSCCY*A*SGMELMRLCGAWRRTHTS 174
           CYAFG  SCK+   S    +  NLS      SG  L+ +CG + R   S
Sbjct: 378 CYAFGKFSCKVMIQSVSFAFPINLSVPV-LLSG--LIAMCGMYYRDECS 423


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 19/49 (38%), Positives = 24/49 (48%)
 Frame = +1

Query: 28  CYAFGFXSCKLXHLSPQXTWRSNLSCCY*A*SGMELMRLCGAWRRTHTS 174
           CYAFG  SCK+   S    +  NLS      SG  L+ +CG + R   S
Sbjct: 378 CYAFGKFSCKVMIQSVSFAFPINLSVPV-LLSG--LIAMCGMYYRDECS 423


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 577 MNQRIIEFYSSVYSRWRASWVWPP 648
           +N  +   Y+++ S+W A W + P
Sbjct: 241 VNDVVASCYATIDSQWLAHWAFAP 264


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 172 LCVFGAKLHISASVP 128
           LC+FGAK+H  +  P
Sbjct: 334 LCLFGAKVHDESIKP 348


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 738 SFIKTLLAYCYLITQLAS 685
           S +K  L+YC+ +  LAS
Sbjct: 278 SIVKNCLSYCFNLYHLAS 295


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 738 SFIKTLLAYCYLITQLAS 685
           S +K  L+YC+ +  LAS
Sbjct: 278 SIVKNCLSYCFNLYHLAS 295


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,291
Number of Sequences: 336
Number of extensions: 3590
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)