Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_F08
(756 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0873 - 32372143-32372287,32372678-32372754,32372863-323730... 100 1e-21
07_03_1385 + 26189034-26189294,26189427-26189636,26191016-261910... 93 3e-19
09_04_0359 + 16941904-16942110,16943636-16943785,16944084-169442... 89 4e-18
03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312 87 2e-17
03_05_1098 - 30395704-30395837,30396644-30396751,30396933-303971... 64 2e-10
06_01_0751 + 5630036-5630233,5630623-5630718,5631420-5631629,563... 59 4e-09
08_02_1381 - 26551920-26552053,26552963-26553070,26553154-265533... 45 6e-05
09_04_0676 - 19383757-19383890,19384308-19384415,19384493-193846... 38 0.009
08_02_0963 + 23068851-23069042,23069262-23069414,23069590-230696... 37 0.015
01_03_0103 - 12567986-12568141,12568307-12568442,12568751-125688... 31 1.3
11_06_0689 - 26294961-26294976,26295271-26295414,26295506-262959... 29 3.0
01_07_0226 + 42130300-42131430,42131530-42131715,42133244-421333... 29 4.0
01_04_0090 - 15940935-15941438 29 5.3
08_01_0889 + 8753877-8754236,8754995-8755054,8755174-8755250,875... 28 7.0
>02_05_0873 -
32372143-32372287,32372678-32372754,32372863-32373072,
32374645-32374869
Length = 218
Score = 100 bits (240), Expect = 1e-21
Identities = 60/208 (28%), Positives = 111/208 (53%), Gaps = 4/208 (1%)
Frame = +3
Query: 84 MEVQSLVLLLSLIWHGTDALMWSLAPNTHKCLKEELHANVLVAGEYDVT----EIQGQRV 251
+ V + V+ + + +A+ L + KC+ EE+ +NV+V +Y + +
Sbjct: 13 LAVAAAVIAAACLLLCAEAVWLDLPQSGTKCVSEEIQSNVVVLADYALMYESHPSSHPTI 72
Query: 252 DYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIGI 431
+ G+ L + T G+F+F T + CF + S +G ++LD KIGI
Sbjct: 73 AVKVTSPYGNTLHHNENATVGQFAFTTSEAGNYLACFW--IDSAEKGSGISINLDWKIGI 130
Query: 432 EAKTYEGIGEAAKLKPMEVELKRLXDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFS 611
AK ++ I + K++ +E+EL++L ++I Q+ ++ RE EMR +E TN RV +FS
Sbjct: 131 AAKDWDVIAKKEKIEGVELELRKLEVAVQSIHQNMIYLKAREAEMRTVSEKTNARVAWFS 190
Query: 612 IFSMACLLGLATWQVLYLRRFFKAKKLI 695
I S++ + ++ Q+ +L+ +F+ KKLI
Sbjct: 191 ILSLSVCIVVSILQLWHLQGYFQKKKLI 218
>07_03_1385 +
26189034-26189294,26189427-26189636,26191016-26191092,
26191196-26191340
Length = 230
Score = 92.7 bits (220), Expect = 3e-19
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 10/210 (4%)
Frame = +3
Query: 96 SLVLLLSLIWHGTDALMWSLAPNTHKCLKEELHANVLVAGEYDVTEIQGQRVDYIIKDSK 275
+++LLLS AL + L KC+ +E+ N +V G+Y V D + DS
Sbjct: 23 AVLLLLSAAPRTARALRFDLESGHTKCISDEIKVNSMVVGKYHVVGPDPNFPDNPLPDSH 82
Query: 276 ----------GHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKI 425
G+ + + V G F+F + CF + P + + D +
Sbjct: 83 RISLRVTSPYGNSVHYAENVPSGNFAFTATEAGDYLACFWA--PDHKPPVSIGFEFDWRS 140
Query: 426 GIEAKTYEGIGEAAKLKPMEVELKRLXDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLF 605
G+ AK + + + ++ ME+ELK+L + ++I ++ +R+REEEM++ N+ TN+R+ +
Sbjct: 141 GVAAKDWSNVAKKGQVDVMEMELKKLEETIKSIHEEMFYLREREEEMQNLNKQTNSRMAW 200
Query: 606 FSIFSMACLLGLATWQVLYLRRFFKAKKLI 695
S+ L +A Q+ +L+ FF+ KKL+
Sbjct: 201 LGFLSLGICLSVAGLQLWHLKTFFERKKLL 230
>09_04_0359 +
16941904-16942110,16943636-16943785,16944084-16944293,
16944376-16944452,16944554-16944698
Length = 262
Score = 89.0 bits (211), Expect = 4e-18
Identities = 46/140 (32%), Positives = 84/140 (60%)
Frame = +3
Query: 276 GHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIGIEAKTYEGI 455
G I+ K V+ G+FSF T + CF + ++R + +++LD ++GI K ++ +
Sbjct: 125 GDIVHHKQKVSTGQFSFTTAEAGNYLACFSADGRNKRLVV--KLNLDWRVGIATKDWDSV 182
Query: 456 GEAAKLKPMEVELKRLXDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMACLL 635
+ KL+ +E+EL +L +AI ++ L+R +E MRDT+E TN R + SI S+ +
Sbjct: 183 AKKEKLEGVELELVKLETSVQAIHENLLLLRSKEANMRDTSEKTNARATWLSIISLIVCI 242
Query: 636 GLATWQVLYLRRFFKAKKLI 695
++ Q+ +L+++F+ KKLI
Sbjct: 243 IVSVLQLWHLQQYFRKKKLI 262
Score = 34.7 bits (76), Expect = 0.080
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +3
Query: 114 SLIWH---GTDALMWSLAPNTHKCLKEELHANVLVAGEYDV 227
+L+W G A+ + P+ KC+ EE+ +NV+V G+Y V
Sbjct: 16 ALLWWMAAGAGAVWLEIPPSATKCVSEEIQSNVVVIGDYSV 56
>03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312
Length = 232
Score = 86.6 bits (205), Expect = 2e-17
Identities = 46/153 (30%), Positives = 78/153 (50%)
Frame = +3
Query: 237 QGQRVDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLD 416
+ RV + G+ L + V G F+F + CF + P R D
Sbjct: 82 ESHRVSLRVTSPYGNSLHYSENVQSGNFAFTASEAGDYLACFWA--PDHRPTATVGFEFD 139
Query: 417 IKIGIEAKTYEGIGEAAKLKPMEVELKRLXDLSEAIVQDFTLMRKREEEMRDTNESTNNR 596
+ G+ A+ + + + ++ MEVELK+L D +I ++ +R REEEM++ N TN+R
Sbjct: 140 WRSGVSARDWTNVAKKGQVDMMEVELKKLEDTINSIHEEMFYLRAREEEMQELNRRTNSR 199
Query: 597 VLFFSIFSMACLLGLATWQVLYLRRFFKAKKLI 695
+ + FS+A L +A Q+ +L+ FF+ KKL+
Sbjct: 200 MAWLGFFSLAICLSVAGLQLWHLKNFFERKKLL 232
>03_05_1098 -
30395704-30395837,30396644-30396751,30396933-30397119,
30398127-30398330
Length = 210
Score = 63.7 bits (148), Expect = 2e-10
Identities = 38/143 (26%), Positives = 65/143 (45%)
Frame = +3
Query: 249 VDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIG 428
+D + G+ + + KF F M++ CF + G P VS I +G
Sbjct: 65 IDLTVTSPGGNTVYTLKGKSGDKFEFKAPRGGMYKFCFHNPY-----GAPETVSFYIHVG 119
Query: 429 IEAKTYEGIGEAAKLKPMEVELKRLXDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFF 608
+ + L P+ V++ L + E++ + ++ RE R TNEST RV+F+
Sbjct: 120 -HIPNEHNLAKDEHLDPINVKIAELKEALESVTAEQKYLKAREARHRHTNESTRRRVMFY 178
Query: 609 SIFSMACLLGLATWQVLYLRRFF 677
+I +G + QV+Y+RR F
Sbjct: 179 TIAEYLAFMGASALQVVYIRRLF 201
>06_01_0751 +
5630036-5630233,5630623-5630718,5631420-5631629,
5631735-5631811,5632204-5632222,5632304-5632348
Length = 214
Score = 58.8 bits (136), Expect = 4e-09
Identities = 30/98 (30%), Positives = 54/98 (55%)
Frame = +3
Query: 276 GHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIGIEAKTYEGI 455
G+ + + T G+F+F T + CF P + G+ ++LD KIGI AK ++ +
Sbjct: 104 GNTVHHNENATTGQFAFTTSEAGNYLACFWLDSPEKGSGV--SLNLDWKIGIAAKDWDTV 161
Query: 456 GEAAKLKPMEVELKRLXDLSEAIVQDFTLMRKREEEMR 569
+ K++ +E+EL++L E+I + ++ RE EMR
Sbjct: 162 AKKEKIEGVELELRKLEAAVESIHHNLLYLKAREAEMR 199
Score = 31.5 bits (68), Expect = 0.75
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = +3
Query: 90 VQSLVLLLSLIWHG--TDALMWSLAPNTHKCLKEELHANVLVAGEY 221
V ++V++++L+ G +A+ L P KC+ EE+ NV+V +Y
Sbjct: 4 VAAMVVVVALLLGGGAVEAVWLDLPPTGTKCVSEEIQPNVVVLADY 49
>08_02_1381 -
26551920-26552053,26552963-26553070,26553154-26553340,
26554107-26554316
Length = 212
Score = 45.2 bits (102), Expect = 6e-05
Identities = 31/146 (21%), Positives = 60/146 (41%)
Frame = +3
Query: 249 VDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIG 428
VD ++KD G + T KF F+ + + CF +K P V D+ +G
Sbjct: 67 VDLVVKDPNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFTNKSPYH-----ETVDFDVHVG 121
Query: 429 IEAKTYEGIGEAAKLKPMEVELKRLXDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFF 608
++ + P+ ++ +L + I + + + + NE+ + R +
Sbjct: 122 -HFSYFDQHAKDEHFAPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAVHK 180
Query: 609 SIFSMACLLGLATWQVLYLRRFFKAK 686
++ A L+ + QV LRR F+ K
Sbjct: 181 ALLESAALIAASVIQVYLLRRLFERK 206
>09_04_0676 -
19383757-19383890,19384308-19384415,19384493-19384679,
19384937-19385143
Length = 211
Score = 37.9 bits (84), Expect = 0.009
Identities = 28/146 (19%), Positives = 56/146 (38%)
Frame = +3
Query: 249 VDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIG 428
VD +++D G+ + KF F+ + CF +K P V D+ +
Sbjct: 66 VDLVVRDPNGNQIHDSRDKISDKFEFIVHRRGVHRFCFTNKSPYH-----ETVDFDVLVS 120
Query: 429 IEAKTYEGIGEAAKLKPMEVELKRLXDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFF 608
Y+ + + ++ +L + I + + + + NE+ + R +
Sbjct: 121 -HFSYYDQHAKDEHFSALFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAVHK 179
Query: 609 SIFSMACLLGLATWQVLYLRRFFKAK 686
+ F A L+ + QV L R F+ K
Sbjct: 180 AFFESAALIAASVVQVYLLHRLFERK 205
>08_02_0963 +
23068851-23069042,23069262-23069414,23069590-23069666,
23069744-23069762,23070182-23070202
Length = 153
Score = 37.1 bits (82), Expect = 0.015
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 14/107 (13%)
Frame = +3
Query: 84 MEVQSLVLLLSL--IWHGTDALMWSLAPNTHKCLKEELHANVLVAGEYDVTEIQGQRVDY 257
M +S+VL L+L + +A+ L+ KC E + +NV+V G+YD+ G
Sbjct: 1 MAQRSVVLALALWCLVADGEAVWMELSTTATKCFSERIQSNVVVIGDYDIL-FDGYPTRP 59
Query: 258 I------------IKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCF 362
I + G +L ++ V +G+FSF T ++ CF
Sbjct: 60 ILSIQVILGLLLQVTSPYGKVLHHREKVMQGQFSFNTAEPGVYLACF 106
>01_03_0103 -
12567986-12568141,12568307-12568442,12568751-12568824,
12568932-12569175,12569480-12569766,12570618-12571103,
12571348-12571459,12571540-12571745,12573071-12573276,
12573831-12574162,12574284-12574825,12574967-12576308,
12576386-12576457,12578438-12578505,12579011-12580174
Length = 1808
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -2
Query: 476 LQFCSLPDPFISLCFYADFNI*AYLMWNTSSF*WYFRYKANFKHIIIL 333
L C + S Y+ FN+ + L W + S W+ +N+++I++L
Sbjct: 647 LTLCCFEEDCSSRAIYSGFNLSSSLDWQSYSKRWWMGELSNYEYILVL 694
>11_06_0689 -
26294961-26294976,26295271-26295414,26295506-26295909,
26296112-26296261,26296334-26296497,26296526-26296836,
26296948-26297084,26297276-26297416,26297821-26297867,
26297977-26298072,26298168-26298249,26298332-26298472,
26298607-26298702,26298809-26298877,26298959-26299030,
26299201-26299368,26299577-26299711,26299792-26299958,
26301213-26301369
Length = 898
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 162 NTHKCLKEELHANVLVAGEYDVTEIQGQRVDYIIKDSKGHILSQKDTVTKGK 317
+T +KEE+ VLV GE V IQ ++ D + HI K + K
Sbjct: 294 HTSVSMKEEVSTAVLVNGENVVEHIQAKQTDKYFDQQQKHIKDLKSNLATMK 345
>01_07_0226 +
42130300-42131430,42131530-42131715,42133244-42133345,
42133425-42133481,42133563-42133658,42133736-42133828,
42133945-42134064,42134155-42134187,42134266-42134316,
42135129-42135191
Length = 643
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 306 TKGKFSFVTENYDMFEVCFISKVPSE 383
T+G+F + ENYD++ C VP +
Sbjct: 585 TRGRFRSMKENYDLYVACIDETVPEK 610
>01_04_0090 - 15940935-15941438
Length = 167
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2
Query: 119 NLAWN*CAYVELGAEHTQVFERRITRQRVSCRRI*CDRNTG 241
N A N CA ++ +TQV R T V C R+ CD N G
Sbjct: 110 NYASNSCAAGKVCGHYTQVVWRDSTN--VGCARVRCDANRG 148
>08_01_0889 +
8753877-8754236,8754995-8755054,8755174-8755250,
8755481-8755622,8755736-8755772,8755852-8755921,
8756021-8756212,8756321-8756413,8756545-8756773,
8756861-8756944,8757041-8757192,8757279-8757375,
8757576-8757725,8757813-8757890,8757982-8758104,
8758169-8758315,8758418-8758472,8758807-8758874
Length = 737
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 620 DGVPLGSGHLASPVPSQV 673
DG PLG G LA P PS +
Sbjct: 385 DGTPLGGGSLAPPFPSPI 402
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,040,520
Number of Sequences: 37544
Number of extensions: 377712
Number of successful extensions: 878
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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