Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_F08
(756 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17502| Best HMM Match : No HMM Matches (HMM E-Value=.) 166 2e-41
SB_4813| Best HMM Match : EMP24_GP25L (HMM E-Value=3.9e-13) 92 5e-19
SB_53257| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_24400| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_11345| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_31140| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_49427| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_49697| Best HMM Match : DUF602 (HMM E-Value=3) 29 3.1
SB_40386| Best HMM Match : BAR (HMM E-Value=0) 28 7.1
SB_26056| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_39210| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_22526| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
>SB_17502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 166 bits (403), Expect = 2e-41
Identities = 82/169 (48%), Positives = 117/169 (69%), Gaps = 3/169 (1%)
Frame = +3
Query: 81 NMEVQSLVLLLSLIWH---GTDALMWSLAPNTHKCLKEELHANVLVAGEYDVTEIQGQRV 251
NM+ +++L+ LI +L ++L+ KCLKEE+H +VLV GE+ +++ Q+
Sbjct: 58 NMKSITVLLVPLLICEYILSASSLSFTLSSGNRKCLKEEVHKDVLVTGEFTLSDAPQQKT 117
Query: 252 DYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIGI 431
+ + DS GH+ ++D TKGKF+F T++YDM+EVCF S+ S G +VS++IK G+
Sbjct: 118 NLKVTDSTGHVFYKRDDATKGKFAFTTDDYDMYEVCFDSET-SHGGGSDREVSINIKHGV 176
Query: 432 EAKTYEGIGEAAKLKPMEVELKRLXDLSEAIVQDFTLMRKREEEMRDTN 578
EAK YE + +A KLKPMEVELKRL DL +AIV DF MR+RE+EMRDTN
Sbjct: 177 EAKNYEDLAKAEKLKPMEVELKRLEDLGDAIVNDFAYMRQREQEMRDTN 225
Score = 66.9 bits (156), Expect = 2e-11
Identities = 28/62 (45%), Positives = 45/62 (72%)
Frame = +3
Query: 393 IPHQVSLDIKIGIEAKTYEGIGEAAKLKPMEVELKRLXDLSEAIVQDFTLMRKREEEMRD 572
+ +VS++IK G EAK Y+ + +A KLKP+++ ++RL D+++ IV F R+REEE R+
Sbjct: 232 VRREVSINIKHGTEAKAYQNLAQAEKLKPIKLAMRRLEDMADEIVSSFAYFREREEEQRN 291
Query: 573 TN 578
TN
Sbjct: 292 TN 293
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +3
Query: 570 DTNESTNNRVLFFSIFSMACLLGLATWQVLYLRRFFKAKKLI 695
D EST R+L+ +F L+ L Q++YL RFF AKKLI
Sbjct: 344 DNQESTGARILYLGVFLTMLLVMLTGGQLVYLHRFFAAKKLI 385
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +3
Query: 180 KEELHANVLVAGEYDVTEIQGQRVDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVC 359
+E+ + N + +Y T I+ +D D +L K+ TKGKF+F + F++C
Sbjct: 287 EEQRNTNSMHTIQY-CTNIRNHVIDI---DVTLQLLFTKENATKGKFAFTFDRDGHFDLC 342
Query: 360 F 362
F
Sbjct: 343 F 343
>SB_4813| Best HMM Match : EMP24_GP25L (HMM E-Value=3.9e-13)
Length = 348
Score = 91.9 bits (218), Expect = 5e-19
Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 17/216 (7%)
Frame = +3
Query: 99 LVLLLSLIWH---GTDALMWSLAPNTHKCLKEELHANVLVAGEYDVTEIQGQRV-DYI-- 260
LV+ L+ I + AL + + KC EE+ +V G+Y T++ + + D++
Sbjct: 134 LVVSLAFIGYMLGNVQALYFHMGETEKKCFIEEIPDETMVIGKYK-TQLYDENIKDFLPS 192
Query: 261 ---------IKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVP--SERRGIPHQV 407
+KD G I+ K ++G+F+F + +C S S G ++
Sbjct: 193 SPGIGMHVEVKDPNGKIIMSKYYSSEGRFTFTSHTPGEHVICLHSNSTRWSLWAGGRLRI 252
Query: 408 SLDIKIGIEAKTYEGIGEAAKLKPMEVELKRLXDLSEAIVQDFTLMRKREEEMRDTNEST 587
LDI++G A Y I KL +++ +++L D E I ++ R REE R T+EST
Sbjct: 253 HLDIQVGEHANDYAQIAAKDKLTELQLRIRQLLDQVEQISKEQNYQRFREERFRMTSEST 312
Query: 588 NNRVLFFSIFSMACLLGLATWQVLYLRRFFKAKKLI 695
N RVL++++ LL WQ+ +L+ FF+AKKL+
Sbjct: 313 NQRVLWWALAQTVILLATGFWQMRHLKGFFEAKKLV 348
>SB_53257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 56.8 bits (131), Expect = 2e-08
Identities = 38/159 (23%), Positives = 72/159 (45%)
Frame = +3
Query: 219 YDVTEIQGQRVDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIP 398
++V E +D I ++ + T GK++F + CF +K+ + P
Sbjct: 5 FEVAEGGFLDIDVKIIGPDQKVIYSGERETSGKYTFAAHMDGTYNYCFSNKMSTMT---P 61
Query: 399 HQVSLDIKIGIEAKTYEGIGEAAKLKPMEVELKRLXDLSEAIVQDFTLMRKREEEMRDTN 578
+ + IG K A K E+ + +L + + + M RE R N
Sbjct: 62 KVLKFSMDIGEAPKDTSKEDNAGHDKLSEM-VSQLSEAMTGVKHEQEYMEVRERIHRSIN 120
Query: 579 ESTNNRVLFFSIFSMACLLGLATWQVLYLRRFFKAKKLI 695
++TN+RV+++S F L+ + QV YL+RFF+ ++++
Sbjct: 121 DNTNSRVVWWSFFESLVLVAMTLGQVYYLKRFFEVRRVV 159
>SB_24400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 813
Score = 31.5 bits (68), Expect = 0.76
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Frame = +3
Query: 318 FSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIGI----EAKTYEG--IGEAAKLKP 479
F + T+ D+ +CF + RR I H + LD+ + + E Y G + KL P
Sbjct: 486 FHWGTKIDDLKVLCFRDRFRGGRREIDHSIVLDVTLPVINENECPKYIGWEKNKKQKLGP 545
Query: 480 MEVELKRLXD---LSEAIVQ-DFTLMRKREEEMRDTNESTNNRVLFFSIFSMAC 629
V+L D L+E+ V + LMR R D + ++ R L ++ C
Sbjct: 546 RSVDLSATMDPEKLAESSVDLNLKLMRWRLLPELDLDVVSSTRCLLLGAGTLGC 599
>SB_11345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 30.3 bits (65), Expect = 1.8
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 7/154 (4%)
Frame = +3
Query: 249 VDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCF---ISKVPSER----RGIPHQV 407
+ + ++ G I + T S VTE +E CF S V S+ G+ +
Sbjct: 91 IGFTLQAPSGKIAIEDGHRTDEAHSLVTEEEGEYEFCFDNTFSTVASKAIFADLGVDFED 150
Query: 408 SLDIKIGIEAKTYEGIGEAAKLKPMEVELKRLXDLSEAIVQDFTLMRKREEEMRDTNEST 587
+ IGI+ + E ++ +E ++ D +E I + R+ + + +S
Sbjct: 151 DIQKMIGIKDENLEEDLHDRFVRTLE-NVRVDLDKAEHIQNFISSAAARDFRLAKSKDS- 208
Query: 588 NNRVLFFSIFSMACLLGLATWQVLYLRRFFKAKK 689
RV ++S+ L+G+A QV ++ FF K
Sbjct: 209 --RVFWWSLIQSVALIGVAIVQVNVVKHFFGGGK 240
>SB_31140| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 174 CLK-EELHANVLVAGEYDVTEIQGQRVDYIIKDSKGHILSQKDTVTK 311
CL+ + + L G V +QG R+D I D+ GH +S + +K
Sbjct: 10 CLQGQHITVEELCRGRRSVDSMQGSRIDTIFTDAGGHYVSYRSGSSK 56
>SB_49427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1958
Score = 29.9 bits (64), Expect = 2.3
Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 2/165 (1%)
Frame = +3
Query: 12 VFRSSMLCIRLXFLQAXSSLTTXNME-VQSLVLLLSL-IWHGTDALMWSLAPNTHKCLKE 185
V RS +L R + S E + S V ++ + IW GT WSL P
Sbjct: 916 VIRSEVLYRRRIVEEGESWCCLRRKEGLHSRVFIMIVGIWGGTGHWTWSLDP------PR 969
Query: 186 ELHANVLVAGEYDVTEIQGQRVDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFI 365
+ ++ ++ I ++ KD H+L D+ TK ++F T N++ +
Sbjct: 970 DPMVPIIATAPMELISIDFMSLEK-GKDGYEHVLVATDSFTKYTWAFPTRNHEGIDENLH 1028
Query: 366 SKVPSERRGIPHQVSLDIKIGIEAKTYEGIGEAAKLKPMEVELKR 500
K+ Q ++ K + Y+ + E L+P + L R
Sbjct: 1029 DKLTDAYSRA--QQEIEKKAEANKRRYDALSEDLALQPGDRVLVR 1071
>SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1250
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/103 (23%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Frame = +3
Query: 72 TTXNMEVQSLVLLLSLIWHGTDALMWSLAPNTHKCLKEELHANVLVAGEYDVTEIQGQRV 251
T +++ ++ +LL+L+ A+ W++A + L + L A + +V E++ ++
Sbjct: 302 TGVSLDTFNVFMLLALVNTIRSAVSWNIAEGANY-LGDFLSALDRIQNFLEVKELKKKKQ 360
Query: 252 DYIIK-DSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVP 377
Y + D K + + +++ G+FS V +N + F+S+VP
Sbjct: 361 TYFLDVDPKNNDVPRQE----GEFSDVNDNKEDDSEVFLSEVP 399
>SB_49697| Best HMM Match : DUF602 (HMM E-Value=3)
Length = 294
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +3
Query: 465 AKLKPMEVELKRLXDLSEAIVQDFTLMRKREE--EMRDTNESTNNRV 599
A+L +++EL + +L ++V+D LMR+R E E R+ + S + RV
Sbjct: 64 AELSQIKLELCEIKNLLLSVVEDNRLMRRRLEMGEQREPDASASARV 110
>SB_40386| Best HMM Match : BAR (HMM E-Value=0)
Length = 369
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 186 ELHANVLVAGEYDVTEIQGQRVDYIIKDSKGHILSQKDTVTKGKFSF 326
+L AN L ++ ++QG+R+DY K KG+ +S ++ T +F F
Sbjct: 143 DLEANDLKELTFNRKKLQGRRLDYDCKKRKGNKVSIEEIKT-AQFKF 188
>SB_26056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +3
Query: 465 AKLKPMEVELKRLXDLSEAIVQDFTLMRKREE--EMRDTNESTNNRV 599
A+L +++EL + +L ++V+D LMR+R + E R+ + S + RV
Sbjct: 78 AELSQIKLELCEIKNLLLSVVEDNRLMRRRLDMREQREPDASASARV 124
>SB_39210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 378
Score = 27.9 bits (59), Expect = 9.4
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +3
Query: 249 VDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIG 428
+D I K H + V K SF + DM+ + F + + I ++D+KI
Sbjct: 100 IDLIAAKVKSHRGCRSTYVAKRNLSFAVDGADMYTIAFTNLMDKILPEIQSDCAVDMKIV 159
Query: 429 IEA--KTYEGIG-EAAKLKPMEVELKR 500
+ + EG+G + A++ E LKR
Sbjct: 160 LLSYQDELEGLGCDTARIYRTE-RLKR 185
>SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1161
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 510 LSEAIVQDFTLMRKREEEMRDTNE 581
LSE++ + + RK EEE+RD++E
Sbjct: 741 LSESLEKSVAVQRKMEEELRDSSE 764
>SB_22526| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 666
Score = 27.9 bits (59), Expect = 9.4
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 14/80 (17%)
Frame = +3
Query: 144 MWSLAPNTHKCLKEELH-------ANVLVAGEYD--VTEIQGQR----VDYIIKD-SKGH 281
+WSLA + K K ELH + + GEYD + E+Q Q +I D K H
Sbjct: 135 LWSLASDQGKFTKAELHDLQTEFKHHKIKMGEYDKLLNELQKQHDISDNSVLIHDRMKEH 194
Query: 282 ILSQKDTVTKGKFSFVTENY 341
+ Q K K +TENY
Sbjct: 195 EVEQLKKKLKDKHDDLTENY 214
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,344,392
Number of Sequences: 59808
Number of extensions: 447195
Number of successful extensions: 1008
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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