Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_F08
(756 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74035-1|CAA98480.1| 204|Caenorhabditis elegans Hypothetical pr... 209 1e-54
AL117207-7|CAB60397.1| 211|Caenorhabditis elegans Hypothetical ... 103 1e-22
AF014940-5|AAB63937.1| 203|Caenorhabditis elegans Suppressor/en... 60 2e-09
AC199170-2|ABO33261.1| 167|Caenorhabditis elegans Hypothetical ... 48 7e-06
Z68116-10|CAI79231.1| 182|Caenorhabditis elegans Hypothetical p... 30 1.5
Z35639-3|CAA84695.2| 780|Caenorhabditis elegans Hypothetical pr... 29 2.7
U58083-1|AAC47120.1| 780|Caenorhabditis elegans CUL-1 protein. 29 2.7
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical p... 28 6.2
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical p... 28 6.2
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 28 6.2
Z46267-16|CAO78720.1| 576|Caenorhabditis elegans Hypothetical p... 28 6.2
Z46267-4|CAD45594.1| 517|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z46267-3|CAA86421.3| 522|Caenorhabditis elegans Hypothetical pr... 28 6.2
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 6.2
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 28 6.2
AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B... 28 6.2
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 28 6.2
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 28 6.2
AF067216-14|AAC17517.4| 729|Caenorhabditis elegans Hypothetical... 28 6.2
AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical ... 28 6.2
AL117206-9|CAL22706.1| 292|Caenorhabditis elegans Hypothetical ... 28 8.2
>Z74035-1|CAA98480.1| 204|Caenorhabditis elegans Hypothetical
protein F47G9.1 protein.
Length = 204
Score = 209 bits (511), Expect = 1e-54
Identities = 102/205 (49%), Positives = 145/205 (70%), Gaps = 2/205 (0%)
Frame = +3
Query: 90 VQSLVLLLSLIWHGTDALMWSLAPNTHKCLKEELHANVLVAGEYDVTEIQGQRVDYIIKD 269
++SLV+ LS I +L + + P KCLKEE+H NV+V GEY+ ++ + D
Sbjct: 1 MKSLVIFLSAIVLA-HSLRFYVPPKEKKCLKEEIHKNVVVTGEYEFSQGIQYTGSIHVTD 59
Query: 270 SKGHILSQKDTVT--KGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIGIEAKT 443
++GH L +++ KGKF+F + YD+FE+C + P+ G +VSL +K G+EAK
Sbjct: 60 TRGHTLYKRENFADLKGKFAFTADEYDIFEICIENHPPAGHPGEKREVSLILKHGVEAKN 119
Query: 444 YEGIGEAAKLKPMEVELKRLXDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSM 623
Y+ I +A KLKP+EVEL+RL D++++I +DF MR+REEEMR+TNESTN+RVL+ SIFSM
Sbjct: 120 YDDIAKAEKLKPLEVELRRLEDMADSITKDFAFMRQREEEMRNTNESTNSRVLYLSIFSM 179
Query: 624 ACLLGLATWQVLYLRRFFKAKKLIE 698
CLLGLA WQVL+LR +FK+KKLI+
Sbjct: 180 LCLLGLAIWQVLFLRNYFKSKKLID 204
>AL117207-7|CAB60397.1| 211|Caenorhabditis elegans Hypothetical
protein Y60A3A.9 protein.
Length = 211
Score = 103 bits (248), Expect = 1e-22
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 10/209 (4%)
Frame = +3
Query: 99 LVLLLSLIWHGTDALMWSLAPNTHKCLKEELHANVLVAGEYDVTEIQGQRVDY------- 257
L+ LLSL + D+L + +A KC EE+ +V G Y V Y
Sbjct: 4 LIALLSLATYA-DSLYFHIAETEKKCFIEEIPDETMVTGNYKVQLYDPNTKGYGDYPNIG 62
Query: 258 ---IIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIG 428
+KD + ++ K +G+F+F + +C S + G +V LDI+ G
Sbjct: 63 MHVEVKDPEDKVILSKLYTAEGRFTFTSNTPGEHVICIYSNSTAWFNGAQLRVHLDIQAG 122
Query: 429 IEAKTYEGIGEAAKLKPMEVELKRLXDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFF 608
A+ Y I + KL +++ +++L D + I ++ R REE R T+ESTN+RV ++
Sbjct: 123 DHAQDYAQIAQKDKLNELQLRIRQLLDQVDQITKEQNYQRYREERFRQTSESTNSRVFYW 182
Query: 609 SIFSMACLLGLATWQVLYLRRFFKAKKLI 695
SI + L WQ+ +LR FF+AKKL+
Sbjct: 183 SIAQVVVLAITGAWQMRHLRGFFEAKKLV 211
>AF014940-5|AAB63937.1| 203|Caenorhabditis elegans
Suppressor/enhancer of lin-12 protein9 protein.
Length = 203
Score = 60.1 bits (139), Expect = 2e-09
Identities = 41/181 (22%), Positives = 82/181 (45%), Gaps = 3/181 (1%)
Frame = +3
Query: 162 NTHKCLKEELHANVLVAGEYDVTEIQGQRVDYIIKDSKGHILSQKDTVTKGKFSFVTENY 341
N +C + L + + ++V E +D I + + + + GKF+F
Sbjct: 26 NEEQCFFDRLTSGTKMGLMFEVAEGGFLDIDVKITGPDNKEIYKGERESSGKFTFAAHMD 85
Query: 342 DMFEVCFISKVPSERRGIPHQVSLDIKIGIEAKTYEGIG---EAAKLKPMEVELKRLXDL 512
++ CF +K+ + P V ++I + G +AA +E ++ L
Sbjct: 86 GVYTYCFGNKMSTMT---PKAVMFTVEITEPHQQAPGAAANQDAADNAKLEEMVRELSSA 142
Query: 513 SEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMACLLGLATWQVLYLRRFFKAKKL 692
++ + M RE R+ NE+TN+RV+ ++ F L+G+ Q+ YL+RFF+ + +
Sbjct: 143 LMSVKHEQEYMEVRERVHRNINENTNSRVVMWAAFEAFVLVGMTVGQIFYLKRFFEVRTM 202
Query: 693 I 695
+
Sbjct: 203 V 203
>AC199170-2|ABO33261.1| 167|Caenorhabditis elegans Hypothetical
protein T08D2.1 protein.
Length = 167
Score = 48.0 bits (109), Expect = 7e-06
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 10/135 (7%)
Frame = +3
Query: 99 LVLLLSLIWHGTDALMWSLAPNTHKCLKEELHANVLVAGEYDVTEIQGQRVDY------- 257
L+ LLSL + D+L + +A KC EE+ +V G Y V Y
Sbjct: 4 LIALLSLATYA-DSLYFHIAETEKKCFIEEIPDETMVTGNYKVQLYDPNTKGYGDYPNIG 62
Query: 258 ---IIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIG 428
+KD + ++ K ++G+F+F + +C S + G +V LDI+ G
Sbjct: 63 MHVEVKDPEDKVILSKLYTSEGRFTFTSNTPGEHVICIYSNTTAWFNGAQLRVHLDIQAG 122
Query: 429 IEAKTYEGIGEAAKL 473
A+ Y + E KL
Sbjct: 123 DHAQDYAQVEEERKL 137
>Z68116-10|CAI79231.1| 182|Caenorhabditis elegans Hypothetical
protein F42F12.11 protein.
Length = 182
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/50 (26%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +3
Query: 183 EELHANV-LVAGEYDVTEIQGQRVDYIIKDSKGHILSQKDTVTKGKFSFV 329
E++ N+ L G Y+V++ G +VD ++ ++ +++S++ + +GK + V
Sbjct: 73 EDIQPNIRLYDGHYEVSDGYGNQVDLVLTVAQRNLISERCFLLQGKIAHV 122
>Z35639-3|CAA84695.2| 780|Caenorhabditis elegans Hypothetical
protein D2045.6 protein.
Length = 780
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +3
Query: 147 WSLAPNTHKCLKEELHANVLVAGEYDVTEIQGQRVDYIIKDSKGHILS 290
W P T L ++L + + G++ + G+R+ ++ S+G I S
Sbjct: 550 WPTFPTTPITLPQQLSKTIEIFGQFYNEKFNGRRLTWVYSQSRGEITS 597
>U58083-1|AAC47120.1| 780|Caenorhabditis elegans CUL-1 protein.
Length = 780
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +3
Query: 147 WSLAPNTHKCLKEELHANVLVAGEYDVTEIQGQRVDYIIKDSKGHILS 290
W P T L ++L + + G++ + G+R+ ++ S+G I S
Sbjct: 550 WPTFPTTPITLPQQLSKTIEIFGQFYNEKFNGRRLTWVYSQSRGEITS 597
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 330 TENYDMFEVCFISKVPSERRGIPHQVSLDIKIGIEAKTYEG 452
T+ D +CFI + + + Q +D+KIG + +EG
Sbjct: 3213 TDRSDESSLCFIDECSLAEKPLCEQKCMDMKIGYKCDCFEG 3253
>Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 28.3 bits (60), Expect = 6.2
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +3
Query: 21 SSMLCIRLXFLQAXSSLTTXNMEVQSLVLLLSLIWHGTDALMWSLAPNTHKCLKEELHA- 197
S L + L F+Q S+ M ++ + L + DA LA N E+L +
Sbjct: 332 SEDLAVLLDFMQHMSAFAALPMSIKRQLCLKMVFAVVNDAGTVVLAHN------EKLDSW 385
Query: 198 NVLVAGEYDVTEIQGQRVDYIIKDSKG 278
+V+V G +V + G+RV+Y + DS G
Sbjct: 386 SVIVNGCVEVVKPSGERVEYKLGDSFG 412
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 28.3 bits (60), Expect = 6.2
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +3
Query: 21 SSMLCIRLXFLQAXSSLTTXNMEVQSLVLLLSLIWHGTDALMWSLAPNTHKCLKEELHA- 197
S L + L F+Q S+ M ++ + L + DA LA N E+L +
Sbjct: 332 SEDLAVLLDFMQHMSAFAALPMSIKRQLCLKMVFAVVNDAGTVVLAHN------EKLDSW 385
Query: 198 NVLVAGEYDVTEIQGQRVDYIIKDSKG 278
+V+V G +V + G+RV+Y + DS G
Sbjct: 386 SVIVNGCVEVVKPSGERVEYKLGDSFG 412
>Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 28.3 bits (60), Expect = 6.2
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +3
Query: 21 SSMLCIRLXFLQAXSSLTTXNMEVQSLVLLLSLIWHGTDALMWSLAPNTHKCLKEELHA- 197
S L + L F+Q S+ M ++ + L + DA LA N E+L +
Sbjct: 332 SEDLAVLLDFMQHMSAFAALPMSIKRQLCLKMVFAVVNDAGTVVLAHN------EKLDSW 385
Query: 198 NVLVAGEYDVTEIQGQRVDYIIKDSKG 278
+V+V G +V + G+RV+Y + DS G
Sbjct: 386 SVIVNGCVEVVKPSGERVEYKLGDSFG 412
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 28.3 bits (60), Expect = 6.2
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +3
Query: 21 SSMLCIRLXFLQAXSSLTTXNMEVQSLVLLLSLIWHGTDALMWSLAPNTHKCLKEELHA- 197
S L + L F+Q S+ M ++ + L + DA LA N E+L +
Sbjct: 332 SEDLAVLLDFMQHMSAFAALPMSIKRQLCLKMVFAVVNDAGTVVLAHN------EKLDSW 385
Query: 198 NVLVAGEYDVTEIQGQRVDYIIKDSKG 278
+V+V G +V + G+RV+Y + DS G
Sbjct: 386 SVIVNGCVEVVKPSGERVEYKLGDSFG 412
>Z46267-16|CAO78720.1| 576|Caenorhabditis elegans Hypothetical
protein F49E2.2c protein.
Length = 576
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 159 PNTHKCLKEELHANVLVAGEYDVTEIQGQRVDYIIKDSKGHILSQKDT 302
P HK ++LH + V ++ E ++VD ++DS+ + S T
Sbjct: 269 PEDHKDWHQDLHEHAAVVAAEEIKENVEKKVDEAVQDSRSNSTSSVAT 316
>Z46267-4|CAD45594.1| 517|Caenorhabditis elegans Hypothetical
protein F49E2.2b protein.
Length = 517
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 159 PNTHKCLKEELHANVLVAGEYDVTEIQGQRVDYIIKDSKGHILSQKDT 302
P HK ++LH + V ++ E ++VD ++DS+ + S T
Sbjct: 215 PEDHKDWHQDLHEHAAVVAAEEIKENVEKKVDEAVQDSRSNSTSSVAT 262
>Z46267-3|CAA86421.3| 522|Caenorhabditis elegans Hypothetical
protein F49E2.2a protein.
Length = 522
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 159 PNTHKCLKEELHANVLVAGEYDVTEIQGQRVDYIIKDSKGHILSQKDT 302
P HK ++LH + V ++ E ++VD ++DS+ + S T
Sbjct: 215 PEDHKDWHQDLHEHAAVVAAEEIKENVEKKVDEAVQDSRSNSTSSVAT 262
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 330 TENYDMFEVCFISKVPSERRGIPHQVSLDIKIGIEAKTYEG 452
T+ D +CFI + + + Q +D+KIG + +EG
Sbjct: 3213 TDRSDESSLCFIDECSLAEKPLCEQKCMDMKIGYKCDCFEG 3253
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 28.3 bits (60), Expect = 6.2
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +3
Query: 21 SSMLCIRLXFLQAXSSLTTXNMEVQSLVLLLSLIWHGTDALMWSLAPNTHKCLKEELHA- 197
S L + L F+Q S+ M ++ + L + DA LA N E+L +
Sbjct: 209 SEDLAVLLDFMQHMSAFAALPMSIKRQLCLKMVFAVVNDAGTVVLAHN------EKLDSW 262
Query: 198 NVLVAGEYDVTEIQGQRVDYIIKDSKG 278
+V+V G +V + G+RV+Y + DS G
Sbjct: 263 SVIVNGCVEVVKPSGERVEYKLGDSFG 289
>AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B
protein.
Length = 1311
Score = 28.3 bits (60), Expect = 6.2
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +3
Query: 21 SSMLCIRLXFLQAXSSLTTXNMEVQSLVLLLSLIWHGTDALMWSLAPNTHKCLKEELHA- 197
S L + L F+Q S+ M ++ + L + DA LA N E+L +
Sbjct: 332 SEDLAVLLDFMQHMSAFAALPMSIKRQLCLKMVFAVVNDAGTVVLAHN------EKLDSW 385
Query: 198 NVLVAGEYDVTEIQGQRVDYIIKDSKG 278
+V+V G +V + G+RV+Y + DS G
Sbjct: 386 SVIVNGCVEVVKPSGERVEYKLGDSFG 412
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 28.3 bits (60), Expect = 6.2
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +3
Query: 21 SSMLCIRLXFLQAXSSLTTXNMEVQSLVLLLSLIWHGTDALMWSLAPNTHKCLKEELHA- 197
S L + L F+Q S+ M ++ + L + DA LA N E+L +
Sbjct: 332 SEDLAVLLDFMQHMSAFAALPMSIKRQLCLKMVFAVVNDAGTVVLAHN------EKLDSW 385
Query: 198 NVLVAGEYDVTEIQGQRVDYIIKDSKG 278
+V+V G +V + G+RV+Y + DS G
Sbjct: 386 SVIVNGCVEVVKPSGERVEYKLGDSFG 412
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 28.3 bits (60), Expect = 6.2
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +3
Query: 21 SSMLCIRLXFLQAXSSLTTXNMEVQSLVLLLSLIWHGTDALMWSLAPNTHKCLKEELHA- 197
S L + L F+Q S+ M ++ + L + DA LA N E+L +
Sbjct: 332 SEDLAVLLDFMQHMSAFAALPMSIKRQLCLKMVFAVVNDAGTVVLAHN------EKLDSW 385
Query: 198 NVLVAGEYDVTEIQGQRVDYIIKDSKG 278
+V+V G +V + G+RV+Y + DS G
Sbjct: 386 SVIVNGCVEVVKPSGERVEYKLGDSFG 412
>AF067216-14|AAC17517.4| 729|Caenorhabditis elegans Hypothetical
protein C35E7.1 protein.
Length = 729
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/95 (22%), Positives = 39/95 (41%)
Frame = +3
Query: 120 IWHGTDALMWSLAPNTHKCLKEELHANVLVAGEYDVTEIQGQRVDYIIKDSKGHILSQKD 299
+W+G ++ N + E++H LV YD + +I I+ KD
Sbjct: 244 VWNGRSEIIEQYVYNCEQGQFEQVHVPELV---YDPNHEVPMNILFIQMSKDRPIVIMKD 300
Query: 300 TVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQ 404
+FV + YD CF++ P + + +P +
Sbjct: 301 E----DGNFVKQEYDSLIDCFVAISPKDAKILPRE 331
>AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical
protein F32D1.9 protein.
Length = 513
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 371 STIRKKRYSTSSKLRY*NRHRSKDL*RDRGGCKIEANGSGTEETXRPI-RSYRSRFHTNE 547
ST+ S R +R RS RDR E G E+ R R +RSR + +
Sbjct: 383 STVSDDDEERRSSRRKRSRSRSPHRDRDRDRRDRETRRRGERESDRTSSRRHRSRSASGD 442
Query: 548 EKRRRNER 571
+R+R++R
Sbjct: 443 RRRKRDDR 450
>AL117206-9|CAL22706.1| 292|Caenorhabditis elegans Hypothetical
protein Y67A10A.11 protein.
Length = 292
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 244 CPCISVTSYSPATNTLACN 188
CPCI VT+ NT ACN
Sbjct: 62 CPCIGVTTKLMICNTQACN 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,510,895
Number of Sequences: 27780
Number of extensions: 337163
Number of successful extensions: 884
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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