Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_F05
(764 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 35 0.003
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 33 0.007
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 31 0.039
AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 31 0.039
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 30 0.090
AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein. 29 0.12
AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein p... 29 0.12
AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 29 0.16
AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein p... 28 0.36
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 27 0.48
AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein p... 27 0.48
AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein pr... 27 0.84
AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein p... 27 0.84
AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein p... 26 1.1
AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykin... 25 2.6
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 24 4.5
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 24 4.5
AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein p... 24 4.5
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 24 4.5
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 23 7.8
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 23 7.8
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 23 7.8
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 23 7.8
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 23 7.8
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 34.7 bits (76), Expect = 0.003
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 567 VDGQPMKVQLSTSRVRQRPGMG-DPEQCYRCGRGGHWSKEC 686
+DG +K+ S+VR P + +CYRC GHW+ +C
Sbjct: 635 LDGTKIKLGFCVSKVRAAPPTPRERVRCYRCLELGHWAHDC 675
Score = 25.0 bits (52), Expect = 2.6
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 6/35 (17%)
Frame = +3
Query: 645 CYRCGRGGHWSKEC---PKAL---GPDRNGFRDRA 731
C RCG GH +K C PK L GP G D A
Sbjct: 685 CIRCGVVGHMAKVCTSQPKCLKCGGPHTIGHPDCA 719
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 33.5 bits (73), Expect = 0.007
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 573 GQPMKVQLSTSRVRQRPGMGDPEQ-CYRCGRGGHWSKEC 686
GQ + V S +++ P + +Q CYRC GH ++EC
Sbjct: 339 GQKLTVSCCISNIKEAPAINLQQQRCYRCLERGHIAREC 377
Score = 25.8 bits (54), Expect = 1.5
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 645 CYRCGRGGHWSKEC 686
C RCG GH +K+C
Sbjct: 387 CIRCGAEGHLAKDC 400
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 31.1 bits (67), Expect = 0.039
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
Frame = -3
Query: 744 DRGRTLDRGNRCGRGPA-PSGTPWTSGPR---GHSGSTARGRPC--PAAAGHDSSTTAP 586
D+G ++G +G A P G P GPR GH G P P A G D AP
Sbjct: 28 DKGEMGEQGRTGAQGNAGPPGAPGPVGPRGLTGHRGEKGNSGPVGPPGAPGRDGMPGAP 86
Score = 26.6 bits (56), Expect = 0.84
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -3
Query: 699 PAPSGTPWTSGPRGHSGSTA-RGRP-CPAAAGH 607
P P G P GP+G G RG P P + G+
Sbjct: 106 PGPKGNPGLRGPKGERGGMGDRGDPGLPGSLGY 138
Score = 25.8 bits (54), Expect = 1.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 693 PSGTPWTSGPRGHSGSTARGRP 628
P G P GP GH G A GRP
Sbjct: 159 PKGEPGPKGPAGHPG--APGRP 178
Score = 24.6 bits (51), Expect = 3.4
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -3
Query: 687 GTPWTSGPRGHSGSTARGRPCPAAAGHDSSTT 592
G SGP+G +G GRP P D T
Sbjct: 332 GLEGPSGPKGDAGVPGYGRPGPQGEKGDIGLT 363
Score = 23.4 bits (48), Expect = 7.8
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = -3
Query: 699 PAPSGTPWTSGPRGHSGSTA-RGRP-CPAAAGHDSSTTAP 586
P P G P GP+G G G P P G D P
Sbjct: 148 PGPPGYPGDVGPKGEPGPKGPAGHPGAPGRPGVDGVKGLP 187
>AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein
protein.
Length = 344
Score = 31.1 bits (67), Expect = 0.039
Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 7/186 (3%)
Frame = +3
Query: 177 LSDKTTEADLRPLFEKYGTVVECDIVRNYG--FVHMENEQVGREAIQNLNGELVHGQAIK 350
+SD T+E +L L ++ + + D +++ G + Q G ++ G A K
Sbjct: 122 ISDCTSE-ELAKLLKE---MKQSDALKSVGETISKVRRAQNGGMLLELKQGSSASAIAPK 177
Query: 351 I-EAAKSRKAPST--PTTKIFVGNLTDKTRAPEVRELFQ-KFGTVVECDIVR-NYGFVHL 515
+ EA K + + T P+ I + +L + T EV E + + +E D ++ G
Sbjct: 178 VKEAVKGKASVRTLAPSKMIEIMHLDEITTPEEVAESVKAQLNIEIEIDRIKMKKGRAAG 237
Query: 516 DATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPKA 695
+N ++ + + G+ +KV S +R+ + + ++CY+C + GH S C +
Sbjct: 238 TQWARINVSLPDFQSFLNLGK-LKVGWSICHIRE---VMEEQKCYKCWKVGHTSYHCRE- 292
Query: 696 LGPDRN 713
PDR+
Sbjct: 293 --PDRS 296
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 29.9 bits (64), Expect = 0.090
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 567 VDGQPMKVQLSTSRVRQRPGMGDPE-QCYRCGRGGHWSKEC 686
+DG +++ SRV+ P +CYRC GH +++C
Sbjct: 524 LDGTKLRLGFCISRVKMAPPTPKEHLRCYRCLEHGHNARDC 564
>AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein.
Length = 786
Score = 29.5 bits (63), Expect = 0.12
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +3
Query: 591 QLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNG 716
++ RV + P C+ CG+ GH ++C + L + +G
Sbjct: 58 KVQEERVLKAKSESKPGACFFCGQPGHKKRDCKEFLNRESSG 99
>AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein
protein.
Length = 400
Score = 29.5 bits (63), Expect = 0.12
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 624 GMGDPEQCYRCGRGGHWSKECPKAL 698
G + C +CG+ GH +ECP A+
Sbjct: 345 GQDRSKLCIKCGQEGHKIRECPNAM 369
>AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein
protein.
Length = 492
Score = 29.1 bits (62), Expect = 0.16
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 11/80 (13%)
Frame = +3
Query: 504 FVHLDATGDVNDAIKELNGMMVDGQPMKVQLST---SRVRQRPGMG--------DPEQCY 650
F LD K NGM + +L+T +R + R G +C+
Sbjct: 360 FTELDGVTFETKMTKSFNGMQTASVKLPTKLATLVAARGKIRIGWSICPVKIQIPKRRCF 419
Query: 651 RCGRGGHWSKECPKALGPDR 710
+C GH+S++C GPDR
Sbjct: 420 KCWETGHFSRDCK---GPDR 436
>AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein
protein.
Length = 298
Score = 27.9 bits (59), Expect = 0.36
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 588 VQLSTSRVRQRPG-MGDPEQCYRCGRGGHWSKEC 686
+ S+ +VR+ P + +C+RC GH +EC
Sbjct: 216 IGFSSCKVREAPKPSAESRRCFRCLERGHMVREC 249
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 27.5 bits (58), Expect = 0.48
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -3
Query: 753 EGRDRGRTLDRGNRCGRG-PAPSGTPWTSGPRGHSGSTARGRPCP 622
E +RG+ +G + G P P G P G +G SGS G P P
Sbjct: 436 EKGERGQMGPKGGQGVPGRPGPEGMPGDKGDKGESGSV--GMPGP 478
Score = 25.4 bits (53), Expect = 1.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -3
Query: 699 PAPSGTPWTSGPRGHSGSTARGRPCP 622
P P G P GP G SG R P
Sbjct: 630 PGPKGEPGLLGPPGPSGEPGRDAEIP 655
Score = 24.2 bits (50), Expect = 4.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 699 PAPSGTPWTSGPRGHSG 649
P SG P GPRG++G
Sbjct: 189 PGLSGLPGNPGPRGYAG 205
Score = 23.4 bits (48), Expect = 7.8
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -3
Query: 708 GRGPAPSGTPWTSGPRGHSG 649
G G G P GPRG+ G
Sbjct: 404 GGGEGRPGAPGPKGPRGYEG 423
Score = 23.4 bits (48), Expect = 7.8
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = -3
Query: 741 RGRTLDRGN--RCGRGPAPSGTPWTSGPRGHSGSTARGRP 628
RG D+G G AP G P G G G T +G P
Sbjct: 696 RGMKGDKGRPGEAGIDGAP-GAPGKDGLPGRHGQTVKGEP 734
>AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein
protein.
Length = 455
Score = 27.5 bits (58), Expect = 0.48
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 600 TSRVRQRPGMGDPEQCYRCGRGGHWSKEC 686
+S + P D ++CYRC GH +++C
Sbjct: 375 SSIMEAMPVSVDRQRCYRCLERGHLARDC 403
Score = 27.5 bits (58), Expect = 0.48
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 639 EQCYRCGRGGHWSKEC 686
+ C RCG GH++K C
Sbjct: 411 QACIRCGADGHYAKSC 426
>AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein
protein.
Length = 476
Score = 26.6 bits (56), Expect = 0.84
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 645 CYRCGRGGHWSKECP 689
C+RC + GH ++CP
Sbjct: 204 CHRCRKPGHMKRDCP 218
>AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein
protein.
Length = 499
Score = 26.6 bits (56), Expect = 0.84
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 642 QCYRCGRGGHWSKECPKALGPDR 710
+CYRC + H S++C GPDR
Sbjct: 430 RCYRCWQTDHISQDC---CGPDR 449
>AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein
protein.
Length = 468
Score = 26.2 bits (55), Expect = 1.1
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 582 MKVQLSTSRVRQRPGMG-DPEQCYRCGRGGHWSKEC 686
+KV + V++ P + +CYRC GH S++C
Sbjct: 384 LKVLYTMCAVKEAPHTPIEKLRCYRCLERGHVSRDC 419
>AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykinin
receptor protein.
Length = 450
Score = 25.0 bits (52), Expect = 2.6
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -3
Query: 660 GHSGSTARGRPCPAAAGHDSSTTAPSWA 577
G+ + CPA G + S T P W+
Sbjct: 14 GNKSTAGTSSCCPAGTGLNGSGTEPGWS 41
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 24.2 bits (50), Expect = 4.5
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 186 KTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNG 323
KT AD RP + +IV YGF E Q+G + NG
Sbjct: 1313 KTVVADFRPYR------ISEEIVTYYGFEPYEQNQIGSDGRWKWNG 1352
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 24.2 bits (50), Expect = 4.5
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 186 KTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNG 323
KT AD RP + +IV YGF E Q+G + NG
Sbjct: 1314 KTVVADFRPYR------ISEEIVTYYGFEPYEQNQIGSDGRWKWNG 1353
>AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein
protein.
Length = 285
Score = 24.2 bits (50), Expect = 4.5
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 642 QCYRCGRGGHWSKEC 686
QCYRC GH + C
Sbjct: 213 QCYRCYEYGHTAARC 227
Score = 24.2 bits (50), Expect = 4.5
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = -2
Query: 736 PNARSRKPLR-SGPSAFGHSLDQ 671
P R RK L GP A GHSL Q
Sbjct: 247 PCTRERKCLGCEGPDAIGHSLGQ 269
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 24.2 bits (50), Expect = 4.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 645 CYRCGRGGHWSKEC 686
C RCG GH +++C
Sbjct: 500 CIRCGSEGHKARDC 513
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 23.4 bits (48), Expect = 7.8
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +2
Query: 608 CPAA-AGHGRPRAVLPLWPRGPLVQGVPEGAG 700
C A AG PRAV P P QGV G G
Sbjct: 18 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 49
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 23.4 bits (48), Expect = 7.8
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +2
Query: 608 CPAA-AGHGRPRAVLPLWPRGPLVQGVPEGAG 700
C A AG PRAV P P QGV G G
Sbjct: 18 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 49
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 23.4 bits (48), Expect = 7.8
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +2
Query: 608 CPAA-AGHGRPRAVLPLWPRGPLVQGVPEGAG 700
C A AG PRAV P P QGV G G
Sbjct: 18 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 49
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 23.4 bits (48), Expect = 7.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 645 CYRCGRGGHWSKEC 686
C+ C R GH ++EC
Sbjct: 377 CFNCLRKGHSAREC 390
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 23.4 bits (48), Expect = 7.8
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +2
Query: 608 CPAA-AGHGRPRAVLPLWPRGPLVQGVPEGAG 700
C A AG PRAV P P QGV G G
Sbjct: 18 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 49
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 792,710
Number of Sequences: 2352
Number of extensions: 17749
Number of successful extensions: 88
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 88
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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