Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_F04
         (382 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82256-2|CAB05115.1|   62|Caenorhabditis elegans Hypothetical pr...    73   7e-14
AL032657-13|CAB76744.1|   87|Caenorhabditis elegans Hypothetical...    54   3e-08
AL032625-6|CAN86641.1|  167|Caenorhabditis elegans Hypothetical ...    42   2e-04
Z50029-8|CAA90342.2|  668|Caenorhabditis elegans Hypothetical pr...    28   2.6  

>Z82256-2|CAB05115.1|   62|Caenorhabditis elegans Hypothetical
           protein B0513.3 protein.
          Length = 62

 Score = 72.9 bits (171), Expect = 7e-14
 Identities = 32/50 (64%), Positives = 38/50 (76%)
 Frame = +2

Query: 62  MAKSKXHTNHNQNRKAHRNGIKKPRKXRHESTLGMDPKFLRNQRFCKKGN 211
           MAKSK HTNHNQN+KAHRNGI KP+K    S  G+D KF++N RF +K N
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGITKPKKHIFLSMKGVDAKFIKNLRFSRKNN 50


>AL032657-13|CAB76744.1|   87|Caenorhabditis elegans Hypothetical
           protein Y47H9C.14 protein.
          Length = 87

 Score = 54.4 bits (125), Expect = 3e-08
 Identities = 24/48 (50%), Positives = 32/48 (66%)
 Frame = +2

Query: 68  KSKXHTNHNQNRKAHRNGIKKPRKXRHESTLGMDPKFLRNQRFCKKGN 211
           K + HTNHN+N KAHRNGI KP+K    S  G   +F+++ RF +K N
Sbjct: 14  KPENHTNHNRNNKAHRNGITKPKKHIFLSIEGSRRQFIKSLRFFRKNN 61


>AL032625-6|CAN86641.1|  167|Caenorhabditis elegans Hypothetical
           protein Y37H9A.5 protein.
          Length = 167

 Score = 41.5 bits (93), Expect = 2e-04
 Identities = 17/23 (73%), Positives = 18/23 (78%)
 Frame = +2

Query: 68  KSKXHTNHNQNRKAHRNGIKKPR 136
           KSK HTNHNQN  AHR GI KP+
Sbjct: 80  KSKNHTNHNQNNTAHRIGITKPK 102


>Z50029-8|CAA90342.2|  668|Caenorhabditis elegans Hypothetical
           protein ZC504.3 protein.
          Length = 668

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = +2

Query: 68  KSKXHTNHNQNRKAHRNGIKKPRKXRHESTLGMDPKFLRNQRFCK 202
           K +  +     +K HR+ +KK R+ RH   +   P +    R C+
Sbjct: 255 KEQWESMTENEQKLHRDAMKKRREQRHREAVSKLPVYYPGLRGCQ 299


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,401,926
Number of Sequences: 27780
Number of extensions: 109356
Number of successful extensions: 271
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 567749674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)