Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_F01
(817 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-... 302 8e-82
BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C (a... 302 8e-82
BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C (a... 302 8e-82
AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C (a... 302 8e-82
AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5 ... 302 8e-82
CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein. 299 6e-81
M87339-1|AAB09785.1| 363|Homo sapiens replication factor C, 37-... 190 7e-48
CR536561-1|CAG38798.1| 363|Homo sapiens RFC4 protein. 190 7e-48
BT006987-1|AAP35633.1| 363|Homo sapiens replication factor C (a... 190 7e-48
BC024022-1|AAH24022.1| 363|Homo sapiens replication factor C (a... 190 7e-48
BC017452-1|AAH17452.1| 363|Homo sapiens replication factor C (a... 190 7e-48
AF538718-1|AAM97933.1| 363|Homo sapiens replication factor C (a... 190 7e-48
M87338-1|AAB09786.1| 354|Homo sapiens replication factor C, 40-... 169 1e-41
AF045555-4|AAC04860.1| 354|Homo sapiens replication factor C su... 169 1e-41
AC005081-1|AAP22334.1| 354|Homo sapiens unknown protein. 169 1e-41
BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C (a... 75 1e-28
BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C (a... 75 1e-28
AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C (a... 75 1e-28
AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein. 75 1e-28
L07541-1|AAB07268.1| 356|Homo sapiens replication factor C, 38-... 82 3e-15
BT019668-1|AAV38474.1| 356|Homo sapiens replication factor C (a... 82 3e-15
BC000149-1|AAH00149.1| 356|Homo sapiens replication factor C (a... 82 3e-15
AL139081-1|CAH70947.1| 356|Homo sapiens replication factor C (a... 82 3e-15
AF484446-1|AAL82505.1| 356|Homo sapiens replication factor C (a... 82 3e-15
AK222572-1|BAD96292.1| 356|Homo sapiens replication factor C 3 ... 81 5e-15
BC006437-1|AAH06437.1| 1016|Homo sapiens CHTF18 protein protein. 44 9e-07
BC018184-1|AAH18184.1| 975|Homo sapiens CTF18, chromosome trans... 44 9e-07
BC006278-1|AAH06278.2| 975|Homo sapiens CTF18, chromosome trans... 44 9e-07
AL031033-2|CAB53056.1| 260|Homo sapiens protein ( Human DNA seq... 44 8e-06
L23320-1|AAA16121.1| 1148|Homo sapiens replication factor C larg... 47 9e-05
BC051786-1|AAH51786.1| 1148|Homo sapiens RFC1 protein protein. 47 9e-05
BC051751-1|AAH51751.1| 1147|Homo sapiens replication factor C (a... 47 9e-05
BC035297-1|AAH35297.1| 1148|Homo sapiens replication factor C (a... 47 9e-05
AY600371-1|AAS94325.1| 1147|Homo sapiens replication factor C (a... 47 9e-05
Z22642-1|CAA80355.1| 1147|Homo sapiens PO-GA protein. 45 4e-04
AF040250-1|AAB99788.1| 1147|Homo sapiens DNA binding protein pro... 45 4e-04
AE006465-2|AAK61256.1| 1184|Homo sapiens some homology with holl... 44 7e-04
AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase interac... 40 0.011
AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase interac... 40 0.011
AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase interac... 40 0.011
AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL... 40 0.011
AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase interac... 40 0.011
AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase interac... 38 0.043
BX537441-1|CAD97683.1| 670|Homo sapiens hypothetical protein pr... 36 0.18
BC032304-1|AAH32304.1| 670|Homo sapiens RAD17 homolog (S. pombe... 36 0.18
AY612854-1|AAT09763.1| 670|Homo sapiens RAD17 homolog (S. pombe... 36 0.18
AJ131296-1|CAB46364.1| 670|Homo sapiens HRAD17 protein protein. 36 0.18
AJ004977-1|CAA06251.1| 670|Homo sapiens cell cycle checkpoint p... 36 0.18
AJ001642-1|CAA04894.1| 670|Homo sapiens cell cycle checkpoint p... 36 0.18
AF126424-1|AAD17334.1| 670|Homo sapiens cell cycle checkpoint p... 36 0.18
AF112263-1|AAD38878.1| 670|Homo sapiens hRad17 protein protein. 36 0.18
AF085736-1|AAC36334.1| 681|Homo sapiens RF-C/activator 1 homolo... 36 0.18
AF076838-1|AAC95520.1| 670|Homo sapiens Rad17-like protein prot... 36 0.18
AF017748-1|AAD01620.1| 670|Homo sapiens cell cycle checkpoint p... 36 0.18
X76040-1|CAA53625.1| 937|Homo sapiens Lon protease-like protein... 36 0.23
X74215-1|CAA52291.1| 845|Homo sapiens Lon protease-like protein... 36 0.23
U02389-1|AAA61616.1| 962|Homo sapiens hLON ATP-dependent protea... 36 0.23
M34079-1|AAA36666.1| 404|Homo sapiens protein ( Human immunodef... 36 0.23
CR456731-1|CAG33012.1| 404|Homo sapiens PSMC3 protein. 36 0.23
BC107804-1|AAI07805.1| 491|Homo sapiens PSMC3 protein protein. 36 0.23
BC106920-1|AAI06921.1| 439|Homo sapiens proteasome (prosome, ma... 36 0.23
BC073165-1|AAH73165.3| 439|Homo sapiens proteasome (prosome, ma... 36 0.23
BC008713-1|AAH08713.4| 439|Homo sapiens proteasome (prosome, ma... 36 0.23
BC004934-1|AAH04934.1| 517|Homo sapiens Unknown (protein for IM... 36 0.23
BC000235-1|AAH00235.1| 959|Homo sapiens lon peptidase 1, mitoch... 36 0.23
AK222485-1|BAD96205.1| 424|Homo sapiens proteasome 26S ATPase s... 36 0.23
AK096626-1|BAC04829.1| 895|Homo sapiens protein ( Homo sapiens ... 36 0.23
AF059309-1|AAD24414.1| 959|Homo sapiens LON protease protein. 36 0.23
BC109218-1|AAI09219.1| 848|Homo sapiens LONP1 protein protein. 35 0.31
CR456466-1|CAG30352.1| 1211|Homo sapiens dJ402G11.8 protein. 34 0.53
BC150137-1|AAI50138.1| 1165|Homo sapiens MOV10L1 protein protein. 34 0.53
BC110434-1|AAI10435.1| 598|Homo sapiens LONP2 protein protein. 34 0.53
BC093912-1|AAH93912.1| 852|Homo sapiens lon peptidase 2, peroxi... 34 0.53
BC093910-1|AAH93910.1| 852|Homo sapiens lon peptidase 2, peroxi... 34 0.53
BC043423-1|AAH43423.1| 301|Homo sapiens ABCB6 protein protein. 34 0.53
BC000559-1|AAH00559.1| 842|Homo sapiens ATP-binding cassette, s... 34 0.53
AL834201-1|CAD38889.1| 715|Homo sapiens hypothetical protein pr... 34 0.53
AL034546-1|CAI23226.1| 1211|Homo sapiens protein ( Human DNA seq... 34 0.53
AL022328-2|CAB63041.1| 417|Homo sapiens protein ( Human DNA seq... 34 0.53
AL022328-1|CAI42752.1| 1211|Homo sapiens protein ( Human DNA seq... 34 0.53
AK172812-1|BAD18782.1| 571|Homo sapiens protein ( Homo sapiens ... 34 0.53
AK074775-1|BAC11201.1| 852|Homo sapiens protein ( Homo sapiens ... 34 0.53
AK057026-1|BAB71347.1| 766|Homo sapiens protein ( Homo sapiens ... 34 0.53
AK027666-1|BAB55278.1| 581|Homo sapiens protein ( Homo sapiens ... 34 0.53
AJ548761-1|CAD68987.1| 852|Homo sapiens peroxisomal lon proteas... 34 0.53
AJ289233-1|CAB95766.2| 842|Homo sapiens ABC transporter umat pr... 34 0.53
AF308472-1|AAG33617.1| 896|Homo sapiens ATP-binding cassette ha... 34 0.53
AF285604-1|AAK31983.1| 1211|Homo sapiens MOV10-like 1 protein. 34 0.53
AF076775-1|AAF75107.1| 842|Homo sapiens MT-ABC transporter prot... 34 0.53
AF070598-1|AAC28653.1| 511|Homo sapiens ABC transporter protein. 34 0.53
AB039371-1|BAA96733.1| 842|Homo sapiens mitochondrial ABC trans... 34 0.53
BC094881-1|AAH94881.1| 1163|Homo sapiens HELZ protein protein. 33 0.93
BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase interac... 33 0.93
BC000981-1|AAH00981.1| 753|Homo sapiens spermatogenesis associa... 33 0.93
AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility as... 33 0.93
AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase interac... 33 0.93
AK023232-1|BAB14482.1| 620|Homo sapiens protein ( Homo sapiens ... 33 0.93
AK022797-1|BAB14248.1| 801|Homo sapiens protein ( Homo sapiens ... 33 0.93
AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protei... 33 0.93
Y18418-1|CAB46271.1| 456|Homo sapiens erythrocyte cytosolic pro... 33 1.2
DQ469310-1|ABF13334.1| 386|Homo sapiens RUVBL1-FK protein. 33 1.2
BT007057-1|AAP35706.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 33 1.2
BC073998-1|AAH73998.1| 287|Homo sapiens ATAD1 protein protein. 33 1.2
BC063530-1|AAH63530.1| 330|Homo sapiens ATAD1 protein protein. 33 1.2
BC012886-1|AAH12886.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 33 1.2
BC002993-1|AAH02993.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 33 1.2
AL391244-1|CAI22656.1| 473|Homo sapiens ATPase family, AAA doma... 33 1.2
AL157945-1|CAI22067.1| 473|Homo sapiens ATPase family, AAA doma... 33 1.2
AL133327-1|CAI16701.1| 361|Homo sapiens ATPase family, AAA doma... 33 1.2
AK222575-1|BAD96295.1| 456|Homo sapiens TATA binding protein in... 33 1.2
AK222563-1|BAD96283.1| 456|Homo sapiens TATA binding protein in... 33 1.2
AK075223-1|BAC11482.1| 361|Homo sapiens protein ( Homo sapiens ... 33 1.2
AJ010058-1|CAA08986.1| 456|Homo sapiens Nuclear matrix protein ... 33 1.2
AF380344-1|AAM45570.1| 456|Homo sapiens pontin 52 protein. 33 1.2
AF099084-1|AAD04427.1| 456|Homo sapiens Pontin52 protein. 33 1.2
AF070735-1|AAC77819.1| 456|Homo sapiens RuvB-like protein RUVBL... 33 1.2
AB012122-1|BAA28169.1| 456|Homo sapiens TIP49 protein. 33 1.2
BC018701-1|AAH18701.1| 648|Homo sapiens ATPase family, AAA doma... 33 1.6
BC002542-1|AAH02542.1| 648|Homo sapiens ATPase family, AAA doma... 33 1.6
AL157945-2|CAI22068.1| 648|Homo sapiens ATPase family, AAA doma... 33 1.6
AK024028-1|BAB14787.1| 480|Homo sapiens protein ( Homo sapiens ... 33 1.6
AB033099-1|BAA86587.1| 606|Homo sapiens KIAA1273 protein protein. 33 1.6
BC009312-1|AAH09312.1| 1003|Homo sapiens Mov10, Moloney leukemia... 32 2.2
BC004499-1|AAH04499.2| 601|Homo sapiens MOV10 protein protein. 32 2.2
BC002548-1|AAH02548.1| 1003|Homo sapiens Mov10, Moloney leukemia... 32 2.2
AL603832-3|CAI14056.1| 947|Homo sapiens Mov10, Moloney leukemia... 32 2.2
AL603832-2|CAI14055.1| 1003|Homo sapiens Mov10, Moloney leukemia... 32 2.2
AK074174-1|BAB85000.1| 925|Homo sapiens FLJ00247 protein protein. 32 2.2
AB046851-1|BAB13457.1| 1032|Homo sapiens KIAA1631 protein protein. 32 2.2
BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein. 32 2.9
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 32 2.9
BC113656-1|AAI13657.1| 1390|Homo sapiens ATPase family, AAA doma... 32 2.9
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 32 2.9
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 32 2.9
BC007123-1|AAH07123.1| 939|Homo sapiens ATAD2 protein protein. 32 2.9
AY598335-1|AAT06746.1| 1390|Homo sapiens L16 protein. 32 2.9
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 32 2.9
AK097133-1|BAC04959.1| 978|Homo sapiens protein ( Homo sapiens ... 32 2.9
AK094821-1|BAC04429.1| 574|Homo sapiens protein ( Homo sapiens ... 32 2.9
AK022348-1|BAB14017.1| 392|Homo sapiens protein ( Homo sapiens ... 32 2.9
AF313486-1|AAG29874.1| 305|Homo sapiens valosin-containing prot... 32 2.9
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 32 2.9
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 32 2.9
D29677-1|BAA06147.2| 1943|Homo sapiens KIAA0054 protein. 31 3.8
BC130582-1|AAI30583.1| 1942|Homo sapiens helicase with zinc fing... 31 3.8
BC063607-1|AAH63607.1| 586|Homo sapiens ATAD3A protein protein. 31 3.8
BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein. 31 3.8
BC034999-1|AAH34999.2| 466|Homo sapiens katanin p60 subunit A-l... 31 3.8
BC033109-1|AAH33109.1| 586|Homo sapiens ATAD3A protein protein. 31 3.8
BC014101-1|AAH14101.1| 586|Homo sapiens ATAD3A protein protein. 31 3.8
BC011814-1|AAH11814.1| 586|Homo sapiens ATAD3A protein protein. 31 3.8
BC007803-1|AAH07803.1| 586|Homo sapiens ATAD3A protein protein. 31 3.8
AL645728-11|CAI22954.1| 634|Homo sapiens ATPase family, AAA dom... 31 3.8
AL645728-10|CAI22955.1| 586|Homo sapiens ATPase family, AAA dom... 31 3.8
AL645728-9|CAI22953.1| 571|Homo sapiens ATPase family, AAA doma... 31 3.8
AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens ... 31 3.8
AK091144-1|BAC03595.1| 634|Homo sapiens protein ( Homo sapiens ... 31 3.8
AK001571-1|BAA91764.1| 586|Homo sapiens protein ( Homo sapiens ... 31 3.8
AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associa... 31 3.8
AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associa... 31 3.8
D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42 pr... 31 6.6
CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein. 31 6.6
BT007259-1|AAP35923.1| 665|Homo sapiens kinesin-like 4 protein. 31 6.6
BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome, ma... 31 6.6
BC106017-1|AAI06018.1| 867|Homo sapiens SETX protein protein. 31 6.6
BC078166-1|AAH78166.1| 917|Homo sapiens SETX protein protein. 31 6.6
BC032622-1|AAH32622.2| 1030|Homo sapiens SETX protein protein. 31 6.6
BC032600-1|AAH32600.1| 828|Homo sapiens SETX protein protein. 31 6.6
BC028155-1|AAH28155.1| 665|Homo sapiens kinesin family member 2... 31 6.6
BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome, ma... 31 6.6
BC004352-1|AAH04352.1| 665|Homo sapiens kinesin family member 2... 31 6.6
AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor aprax... 31 6.6
AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein. 31 6.6
AL159997-5|CAI40857.1| 948|Homo sapiens senataxin protein. 31 6.6
AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein. 31 6.6
AK223431-1|BAD97151.1| 665|Homo sapiens kinesin family member 2... 31 6.6
AK001456-1|BAA91701.1| 828|Homo sapiens protein ( Homo sapiens ... 31 6.6
AF343078-1|AAK38647.1| 578|Homo sapiens TOB3 protein. 31 6.6
AF136523-1|AAD28285.1| 1321|Homo sapiens bile salt export pump p... 31 6.6
AF091582-1|AAC77455.1| 1321|Homo sapiens bile salt export pump p... 31 6.6
AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulato... 31 6.6
AC069137-4|AAY24100.1| 451|Homo sapiens unknown protein. 31 6.6
AC002301-2|AAC08709.1| 198|Homo sapiens Similar to kinesin-like... 31 6.6
AB017430-1|BAA33019.2| 665|Homo sapiens kinesin-like DNA bindin... 31 6.6
AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein. 31 6.6
U96131-1|AAB64095.1| 432|Homo sapiens HPV16 E1 protein binding ... 30 8.7
L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulat... 30 8.7
CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein. 30 8.7
CR456744-1|CAG33025.1| 432|Homo sapiens TRIP13 protein. 30 8.7
BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome, ma... 30 8.7
BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome, ma... 30 8.7
BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome, ma... 30 8.7
BC024032-1|AAH24032.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 30 8.7
BC023507-1|AAH23507.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 30 8.7
BC019294-1|AAH19294.1| 432|Homo sapiens thyroid hormone recepto... 30 8.7
BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome, ma... 30 8.7
BC007795-1|AAH07795.1| 740|Homo sapiens YME1-like 1 (S. cerevis... 30 8.7
BC007500-1|AAH07500.1| 419|Homo sapiens BCS1-like (yeast) protein. 30 8.7
BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome, ma... 30 8.7
BC000416-1|AAH00416.1| 419|Homo sapiens BCS1-like (yeast) protein. 30 8.7
BC000404-1|AAH00404.1| 432|Homo sapiens thyroid hormone recepto... 30 8.7
AY358484-1|AAQ88848.1| 716|Homo sapiens YME1L1 protein. 30 8.7
AL162272-2|CAI12217.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 30 8.7
AL162272-1|CAC19650.2| 773|Homo sapiens YME1-like 1 (S. cerevis... 30 8.7
AL160291-4|CAI16906.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 30 8.7
AL160291-3|CAI16907.1| 773|Homo sapiens YME1-like 1 (S. cerevis... 30 8.7
AK223518-1|BAD97238.1| 419|Homo sapiens BCS1-like variant protein. 30 8.7
AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase s... 30 8.7
AJ132637-1|CAB51858.1| 716|Homo sapiens ATP-dependent metallopr... 30 8.7
AF516670-1|AAN05490.1| 419|Homo sapiens BCS1-like protein protein. 30 8.7
AF346835-1|AAK29417.1| 419|Homo sapiens BCS1 protein. 30 8.7
AF151782-1|AAK57555.1| 773|Homo sapiens ATP-dependent metallopr... 30 8.7
AF038195-1|AAB97365.1| 419|Homo sapiens unknown protein. 30 8.7
AF026849-1|AAD08638.1| 419|Homo sapiens h-bcs1 protein. 30 8.7
>L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-kDa
subunit protein.
Length = 340
Score = 302 bits (742), Expect = 8e-82
Identities = 141/193 (73%), Positives = 164/193 (84%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 414
VEKYRP+ L+DL+SH DI+ TI +F+ E++LPHLL YGPPGTGKTSTILACAKQ+Y ++
Sbjct: 23 VEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKE 82
Query: 415 FSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRII 594
F SMVLELNASDDRGI I+RG ILSFASTRTIFK G KL+ILDEADAMT DAQNALRR+I
Sbjct: 83 FGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQNALRRVI 142
Query: 595 EKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGM 774
EK+TEN RFC+ICNYL KIIPALQSRCTRFRF PL + +VPRL+ +V E V +SE GM
Sbjct: 143 EKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGM 202
Query: 775 KALLTWSGGDMXK 813
KAL+T S GDM +
Sbjct: 203 KALVTLSSGDMRR 215
>BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 302 bits (742), Expect = 8e-82
Identities = 141/193 (73%), Positives = 164/193 (84%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 414
VEKYRP+ L+DL+SH DI+ TI +F+ E++LPHLL YGPPGTGKTSTILACAKQ+Y ++
Sbjct: 23 VEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKE 82
Query: 415 FSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRII 594
F SMVLELNASDDRGI I+RG ILSFASTRTIFK G KL+ILDEADAMT DAQNALRR+I
Sbjct: 83 FGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQNALRRVI 142
Query: 595 EKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGM 774
EK+TEN RFC+ICNYL KIIPALQSRCTRFRF PL + +VPRL+ +V E V +SE GM
Sbjct: 143 EKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGM 202
Query: 775 KALLTWSGGDMXK 813
KAL+T S GDM +
Sbjct: 203 KALVTLSSGDMRR 215
>BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 302 bits (742), Expect = 8e-82
Identities = 141/193 (73%), Positives = 164/193 (84%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 414
VEKYRP+ L+DL+SH DI+ TI +F+ E++LPHLL YGPPGTGKTSTILACAKQ+Y ++
Sbjct: 23 VEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKE 82
Query: 415 FSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRII 594
F SMVLELNASDDRGI I+RG ILSFASTRTIFK G KL+ILDEADAMT DAQNALRR+I
Sbjct: 83 FGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQNALRRVI 142
Query: 595 EKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGM 774
EK+TEN RFC+ICNYL KIIPALQSRCTRFRF PL + +VPRL+ +V E V +SE GM
Sbjct: 143 EKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGM 202
Query: 775 KALLTWSGGDMXK 813
KAL+T S GDM +
Sbjct: 203 KALVTLSSGDMRR 215
>AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 302 bits (742), Expect = 8e-82
Identities = 141/193 (73%), Positives = 164/193 (84%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 414
VEKYRP+ L+DL+SH DI+ TI +F+ E++LPHLL YGPPGTGKTSTILACAKQ+Y ++
Sbjct: 23 VEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKE 82
Query: 415 FSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRII 594
F SMVLELNASDDRGI I+RG ILSFASTRTIFK G KL+ILDEADAMT DAQNALRR+I
Sbjct: 83 FGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQNALRRVI 142
Query: 595 EKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGM 774
EK+TEN RFC+ICNYL KIIPALQSRCTRFRF PL + +VPRL+ +V E V +SE GM
Sbjct: 143 EKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGM 202
Query: 775 KALLTWSGGDMXK 813
KAL+T S GDM +
Sbjct: 203 KALVTLSSGDMRR 215
>AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5
isoform 1 variant protein.
Length = 351
Score = 302 bits (742), Expect = 8e-82
Identities = 141/193 (73%), Positives = 164/193 (84%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 414
VEKYRP+ L+DL+SH DI+ TI +F+ E++LPHLL YGPPGTGKTSTILACAKQ+Y ++
Sbjct: 37 VEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKE 96
Query: 415 FSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRII 594
F SMVLELNASDDRGI I+RG ILSFASTRTIFK G KL+ILDEADAMT DAQNALRR+I
Sbjct: 97 FGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQNALRRVI 156
Query: 595 EKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGM 774
EK+TEN RFC+ICNYL KIIPALQSRCTRFRF PL + +VPRL+ +V E V +SE GM
Sbjct: 157 EKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGM 216
Query: 775 KALLTWSGGDMXK 813
KAL+T S GDM +
Sbjct: 217 KALVTLSSGDMRR 229
>CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein.
Length = 340
Score = 299 bits (735), Expect = 6e-81
Identities = 140/193 (72%), Positives = 163/193 (84%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 414
VEKYRP+ L+DL+SH DI+ TI +F+ E++LPHLL YGPPGTGKTSTILACAKQ+Y ++
Sbjct: 23 VEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKE 82
Query: 415 FSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRII 594
F SMVLELNASDDRGI I+RG ILSFASTRTIFK G KL+ILDEADAMT DAQNALR +I
Sbjct: 83 FGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQNALRGVI 142
Query: 595 EKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGM 774
EK+TEN RFC+ICNYL KIIPALQSRCTRFRF PL + +VPRL+ +V E V +SE GM
Sbjct: 143 EKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGM 202
Query: 775 KALLTWSGGDMXK 813
KAL+T S GDM +
Sbjct: 203 KALVTLSSGDMRR 215
>M87339-1|AAB09785.1| 363|Homo sapiens replication factor C, 37-kDa
subunit protein.
Length = 363
Score = 190 bits (462), Expect = 7e-48
Identities = 96/200 (48%), Positives = 138/200 (69%), Gaps = 7/200 (3%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 414
VEKYRPK +D++ ++++ + + ++ LP+LLFYGPPGTGKTSTILA A++++ P+
Sbjct: 41 VEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPEL 100
Query: 415 FSSMVLELNASDDRGIGIVRGQILSFA-----STRTIFKAGP--KLIILDEADAMTNDAQ 573
F VLELNASD+RGI +VR ++ +FA +R+ K P K++ILDEAD+MT+ AQ
Sbjct: 101 FRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQ 160
Query: 574 NALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGV 753
ALRR +EK ++ RFC+ICNY+ +II L SRC++FRF PL RL +I E V
Sbjct: 161 AALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENV 220
Query: 754 KMSEGGMKALLTWSGGDMXK 813
K+S+ G+ L+ S GD+ K
Sbjct: 221 KISDEGIAYLVKVSEGDLRK 240
>CR536561-1|CAG38798.1| 363|Homo sapiens RFC4 protein.
Length = 363
Score = 190 bits (462), Expect = 7e-48
Identities = 96/200 (48%), Positives = 138/200 (69%), Gaps = 7/200 (3%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 414
VEKYRPK +D++ ++++ + + ++ LP+LLFYGPPGTGKTSTILA A++++ P+
Sbjct: 41 VEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPEL 100
Query: 415 FSSMVLELNASDDRGIGIVRGQILSFA-----STRTIFKAGP--KLIILDEADAMTNDAQ 573
F VLELNASD+RGI +VR ++ +FA +R+ K P K++ILDEAD+MT+ AQ
Sbjct: 101 FRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQ 160
Query: 574 NALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGV 753
ALRR +EK ++ RFC+ICNY+ +II L SRC++FRF PL RL +I E V
Sbjct: 161 AALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENV 220
Query: 754 KMSEGGMKALLTWSGGDMXK 813
K+S+ G+ L+ S GD+ K
Sbjct: 221 KISDEGIAYLVKVSEGDLRK 240
>BT006987-1|AAP35633.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 190 bits (462), Expect = 7e-48
Identities = 96/200 (48%), Positives = 138/200 (69%), Gaps = 7/200 (3%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 414
VEKYRPK +D++ ++++ + + ++ LP+LLFYGPPGTGKTSTILA A++++ P+
Sbjct: 41 VEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPEL 100
Query: 415 FSSMVLELNASDDRGIGIVRGQILSFA-----STRTIFKAGP--KLIILDEADAMTNDAQ 573
F VLELNASD+RGI +VR ++ +FA +R+ K P K++ILDEAD+MT+ AQ
Sbjct: 101 FRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQ 160
Query: 574 NALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGV 753
ALRR +EK ++ RFC+ICNY+ +II L SRC++FRF PL RL +I E V
Sbjct: 161 AALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENV 220
Query: 754 KMSEGGMKALLTWSGGDMXK 813
K+S+ G+ L+ S GD+ K
Sbjct: 221 KISDEGIAYLVKVSEGDLRK 240
>BC024022-1|AAH24022.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 190 bits (462), Expect = 7e-48
Identities = 96/200 (48%), Positives = 138/200 (69%), Gaps = 7/200 (3%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 414
VEKYRPK +D++ ++++ + + ++ LP+LLFYGPPGTGKTSTILA A++++ P+
Sbjct: 41 VEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPEL 100
Query: 415 FSSMVLELNASDDRGIGIVRGQILSFA-----STRTIFKAGP--KLIILDEADAMTNDAQ 573
F VLELNASD+RGI +VR ++ +FA +R+ K P K++ILDEAD+MT+ AQ
Sbjct: 101 FRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQ 160
Query: 574 NALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGV 753
ALRR +EK ++ RFC+ICNY+ +II L SRC++FRF PL RL +I E V
Sbjct: 161 AALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENV 220
Query: 754 KMSEGGMKALLTWSGGDMXK 813
K+S+ G+ L+ S GD+ K
Sbjct: 221 KISDEGIAYLVKVSEGDLRK 240
>BC017452-1|AAH17452.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 190 bits (462), Expect = 7e-48
Identities = 96/200 (48%), Positives = 138/200 (69%), Gaps = 7/200 (3%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 414
VEKYRPK +D++ ++++ + + ++ LP+LLFYGPPGTGKTSTILA A++++ P+
Sbjct: 41 VEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPEL 100
Query: 415 FSSMVLELNASDDRGIGIVRGQILSFA-----STRTIFKAGP--KLIILDEADAMTNDAQ 573
F VLELNASD+RGI +VR ++ +FA +R+ K P K++ILDEAD+MT+ AQ
Sbjct: 101 FRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQ 160
Query: 574 NALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGV 753
ALRR +EK ++ RFC+ICNY+ +II L SRC++FRF PL RL +I E V
Sbjct: 161 AALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENV 220
Query: 754 KMSEGGMKALLTWSGGDMXK 813
K+S+ G+ L+ S GD+ K
Sbjct: 221 KISDEGIAYLVKVSEGDLRK 240
>AF538718-1|AAM97933.1| 363|Homo sapiens replication factor C
(activator 1) 4 (37kD) protein.
Length = 363
Score = 190 bits (462), Expect = 7e-48
Identities = 96/200 (48%), Positives = 138/200 (69%), Gaps = 7/200 (3%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 414
VEKYRPK +D++ ++++ + + ++ LP+LLFYGPPGTGKTSTILA A++++ P+
Sbjct: 41 VEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPEL 100
Query: 415 FSSMVLELNASDDRGIGIVRGQILSFA-----STRTIFKAGP--KLIILDEADAMTNDAQ 573
F VLELNASD+RGI +VR ++ +FA +R+ K P K++ILDEAD+MT+ AQ
Sbjct: 101 FRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQ 160
Query: 574 NALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGV 753
ALRR +EK ++ RFC+ICNY+ +II L SRC++FRF PL RL +I E V
Sbjct: 161 AALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENV 220
Query: 754 KMSEGGMKALLTWSGGDMXK 813
K+S+ G+ L+ S GD+ K
Sbjct: 221 KISDEGIAYLVKVSEGDLRK 240
>M87338-1|AAB09786.1| 354|Homo sapiens replication factor C, 40-kDa
subunit protein.
Length = 354
Score = 169 bits (411), Expect = 1e-41
Identities = 84/192 (43%), Positives = 126/192 (65%), Gaps = 1/192 (0%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 414
VEKYRP +L+++V ++D + + F +E +P+++ GPPGTGKT++IL A+ + P
Sbjct: 39 VEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAL 98
Query: 415 FSSMVLELNASDDRGIGIVRGQILSFASTR-TIFKAGPKLIILDEADAMTNDAQNALRRI 591
+M LELNAS+DRGI +VR +I FA + T+ K K+IILDEAD+MT+ AQ ALRR
Sbjct: 99 KDAM-LELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRT 157
Query: 592 IEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGG 771
+E Y++ RF + CN KII +QSRC R+ L QI+ RL ++ E V ++ G
Sbjct: 158 MEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDG 217
Query: 772 MKALLTWSGGDM 807
++A++ + GDM
Sbjct: 218 LEAIIFTAQGDM 229
>AF045555-4|AAC04860.1| 354|Homo sapiens replication factor C
subunit 2 protein.
Length = 354
Score = 169 bits (411), Expect = 1e-41
Identities = 84/192 (43%), Positives = 126/192 (65%), Gaps = 1/192 (0%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 414
VEKYRP +L+++V ++D + + F +E +P+++ GPPGTGKT++IL A+ + P
Sbjct: 39 VEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAL 98
Query: 415 FSSMVLELNASDDRGIGIVRGQILSFASTR-TIFKAGPKLIILDEADAMTNDAQNALRRI 591
+M LELNAS+DRGI +VR +I FA + T+ K K+IILDEAD+MT+ AQ ALRR
Sbjct: 99 KDAM-LELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRT 157
Query: 592 IEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGG 771
+E Y++ RF + CN KII +QSRC R+ L QI+ RL ++ E V ++ G
Sbjct: 158 MEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDG 217
Query: 772 MKALLTWSGGDM 807
++A++ + GDM
Sbjct: 218 LEAIIFTAQGDM 229
>AC005081-1|AAP22334.1| 354|Homo sapiens unknown protein.
Length = 354
Score = 169 bits (411), Expect = 1e-41
Identities = 84/192 (43%), Positives = 126/192 (65%), Gaps = 1/192 (0%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 414
VEKYRP +L+++V ++D + + F +E +P+++ GPPGTGKT++IL A+ + P
Sbjct: 39 VEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAL 98
Query: 415 FSSMVLELNASDDRGIGIVRGQILSFASTR-TIFKAGPKLIILDEADAMTNDAQNALRRI 591
+M LELNAS+DRGI +VR +I FA + T+ K K+IILDEAD+MT+ AQ ALRR
Sbjct: 99 KDAM-LELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRT 157
Query: 592 IEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGG 771
+E Y++ RF + CN KII +QSRC R+ L QI+ RL ++ E V ++ G
Sbjct: 158 MEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDG 217
Query: 772 MKALLTWSGGDM 807
++A++ + GDM
Sbjct: 218 LEAIIFTAQGDM 229
>BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 74.9 bits (176), Expect(2) = 1e-28
Identities = 35/86 (40%), Positives = 53/86 (61%)
Frame = +1
Query: 550 DAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQ 729
D+MT+ AQ ALRR +E Y++ RF + CN KII +QSRC R+ L QI+ RL
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLM 169
Query: 730 EIVTTEGVKMSEGGMKALLTWSGGDM 807
++ E V ++ G++A++ + GDM
Sbjct: 170 NVIEKERVPYTDDGLEAIIFTAQGDM 195
Score = 72.1 bits (169), Expect(2) = 1e-28
Identities = 32/73 (43%), Positives = 51/73 (69%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 414
VEKYRP +L+++V ++D + + F +E +P+++ GPPGTGKT++IL A+ + P
Sbjct: 39 VEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAL 98
Query: 415 FSSMVLELNASDD 453
+M LELNAS+D
Sbjct: 99 KDAM-LELNASND 110
>BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 74.9 bits (176), Expect(2) = 1e-28
Identities = 35/86 (40%), Positives = 53/86 (61%)
Frame = +1
Query: 550 DAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQ 729
D+MT+ AQ ALRR +E Y++ RF + CN KII +QSRC R+ L QI+ RL
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLM 169
Query: 730 EIVTTEGVKMSEGGMKALLTWSGGDM 807
++ E V ++ G++A++ + GDM
Sbjct: 170 NVIEKERVPYTDDGLEAIIFTAQGDM 195
Score = 72.1 bits (169), Expect(2) = 1e-28
Identities = 32/73 (43%), Positives = 51/73 (69%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 414
VEKYRP +L+++V ++D + + F +E +P+++ GPPGTGKT++IL A+ + P
Sbjct: 39 VEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAL 98
Query: 415 FSSMVLELNASDD 453
+M LELNAS+D
Sbjct: 99 KDAM-LELNASND 110
>AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C
(activator 1) 2 (40kD) protein.
Length = 320
Score = 74.9 bits (176), Expect(2) = 1e-28
Identities = 35/86 (40%), Positives = 53/86 (61%)
Frame = +1
Query: 550 DAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQ 729
D+MT+ AQ ALRR +E Y++ RF + CN KII +QSRC R+ L QI+ RL
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLM 169
Query: 730 EIVTTEGVKMSEGGMKALLTWSGGDM 807
++ E V ++ G++A++ + GDM
Sbjct: 170 NVIEKERVPYTDDGLEAIIFTAQGDM 195
Score = 72.1 bits (169), Expect(2) = 1e-28
Identities = 32/73 (43%), Positives = 51/73 (69%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 414
VEKYRP +L+++V ++D + + F +E +P+++ GPPGTGKT++IL A+ + P
Sbjct: 39 VEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAL 98
Query: 415 FSSMVLELNASDD 453
+M LELNAS+D
Sbjct: 99 KDAM-LELNASND 110
>AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein.
Length = 320
Score = 74.9 bits (176), Expect(2) = 1e-28
Identities = 35/86 (40%), Positives = 53/86 (61%)
Frame = +1
Query: 550 DAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQ 729
D+MT+ AQ ALRR +E Y++ RF + CN KII +QSRC R+ L QI+ RL
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLM 169
Query: 730 EIVTTEGVKMSEGGMKALLTWSGGDM 807
++ E V ++ G++A++ + GDM
Sbjct: 170 NVIEKERVPYTDDGLEAIIFTAQGDM 195
Score = 72.1 bits (169), Expect(2) = 1e-28
Identities = 32/73 (43%), Positives = 51/73 (69%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 414
VEKYRP +L+++V ++D + + F +E +P+++ GPPGTGKT++IL A+ + P
Sbjct: 39 VEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAL 98
Query: 415 FSSMVLELNASDD 453
+M LELNAS+D
Sbjct: 99 KDAM-LELNASND 110
>L07541-1|AAB07268.1| 356|Homo sapiens replication factor C, 38-kDa
subunit protein.
Length = 356
Score = 81.8 bits (193), Expect = 3e-15
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 28/203 (13%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMY---- 402
V+KYRP L L H + + ++ PHLL YGP G GK + I+ +++Y
Sbjct: 5 VDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVGV 64
Query: 403 -----------TPQQ--------FSSMVLELNASDDRGIG--IVRGQILSFASTR---TI 510
TP + S+ LE+N SD +++ + + A ++ T
Sbjct: 65 EKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLETN 124
Query: 511 FKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRF 690
+ K+++L E D +T DAQ+ALRR +EKY R + CN K+IP ++SRC R
Sbjct: 125 SQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRV 184
Query: 691 APLKQDQIVPRLQEIVTTEGVKM 759
+ I L + EG+ +
Sbjct: 185 PAPSIEDICHVLSTVCKKEGLNL 207
>BT019668-1|AAV38474.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 81.8 bits (193), Expect = 3e-15
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 28/203 (13%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMY---- 402
V+KYRP L L H + + ++ PHLL YGP G GK + I+ +++Y
Sbjct: 5 VDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVGV 64
Query: 403 -----------TPQQ--------FSSMVLELNASDDRGIG--IVRGQILSFASTR---TI 510
TP + S+ LE+N SD +++ + + A ++ T
Sbjct: 65 EKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLETN 124
Query: 511 FKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRF 690
+ K+++L E D +T DAQ+ALRR +EKY R + CN K+IP ++SRC R
Sbjct: 125 SQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRV 184
Query: 691 APLKQDQIVPRLQEIVTTEGVKM 759
+ I L + EG+ +
Sbjct: 185 PAPSIEDICHVLSTVCKKEGLNL 207
>BC000149-1|AAH00149.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 81.8 bits (193), Expect = 3e-15
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 28/203 (13%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMY---- 402
V+KYRP L L H + + ++ PHLL YGP G GK + I+ +++Y
Sbjct: 5 VDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVGV 64
Query: 403 -----------TPQQ--------FSSMVLELNASDDRGIG--IVRGQILSFASTR---TI 510
TP + S+ LE+N SD +++ + + A ++ T
Sbjct: 65 EKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLETN 124
Query: 511 FKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRF 690
+ K+++L E D +T DAQ+ALRR +EKY R + CN K+IP ++SRC R
Sbjct: 125 SQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRV 184
Query: 691 APLKQDQIVPRLQEIVTTEGVKM 759
+ I L + EG+ +
Sbjct: 185 PAPSIEDICHVLSTVCKKEGLNL 207
>AL139081-1|CAH70947.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 81.8 bits (193), Expect = 3e-15
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 28/203 (13%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMY---- 402
V+KYRP L L H + + ++ PHLL YGP G GK + I+ +++Y
Sbjct: 5 VDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVGV 64
Query: 403 -----------TPQQ--------FSSMVLELNASDDRGIG--IVRGQILSFASTR---TI 510
TP + S+ LE+N SD +++ + + A ++ T
Sbjct: 65 EKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLETN 124
Query: 511 FKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRF 690
+ K+++L E D +T DAQ+ALRR +EKY R + CN K+IP ++SRC R
Sbjct: 125 SQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRV 184
Query: 691 APLKQDQIVPRLQEIVTTEGVKM 759
+ I L + EG+ +
Sbjct: 185 PAPSIEDICHVLSTVCKKEGLNL 207
>AF484446-1|AAL82505.1| 356|Homo sapiens replication factor C
(activator 1) 3 (38kD) protein.
Length = 356
Score = 81.8 bits (193), Expect = 3e-15
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 28/203 (13%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMY---- 402
V+KYRP L L H + + ++ PHLL YGP G GK + I+ +++Y
Sbjct: 5 VDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVGV 64
Query: 403 -----------TPQQ--------FSSMVLELNASDDRGIG--IVRGQILSFASTR---TI 510
TP + S+ LE+N SD +++ + + A ++ T
Sbjct: 65 EKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLETN 124
Query: 511 FKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRF 690
+ K+++L E D +T DAQ+ALRR +EKY R + CN K+IP ++SRC R
Sbjct: 125 SQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRV 184
Query: 691 APLKQDQIVPRLQEIVTTEGVKM 759
+ I L + EG+ +
Sbjct: 185 PAPSIEDICHVLSTVCKKEGLNL 207
>AK222572-1|BAD96292.1| 356|Homo sapiens replication factor C 3
isoform 1 variant protein.
Length = 356
Score = 81.0 bits (191), Expect = 5e-15
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 28/203 (13%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMY---- 402
V+KYRP L L H + + ++ PHLL YGP G GK + I+ +++Y
Sbjct: 5 VDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVGV 64
Query: 403 -----------TPQQ--------FSSMVLELNASDDRGIG--IVRGQILSFASTR---TI 510
TP + S+ LE+N SD +++ + + A ++ T
Sbjct: 65 EKLRIEHQTTTTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLETN 124
Query: 511 FKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRF 690
+ K+++L E D +T DAQ+ALRR +EKY R + CN K+IP ++SRC R
Sbjct: 125 SQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRV 184
Query: 691 APLKQDQIVPRLQEIVTTEGVKM 759
+ I L + EG+ +
Sbjct: 185 PAPSIEGICHVLSTVCKKEGLNL 207
>BC006437-1|AAH06437.1| 1016|Homo sapiens CHTF18 protein protein.
Length = 1016
Score = 44.0 bits (99), Expect(2) = 9e-07
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFK 516
L GPPG GKT+ A+ V+E+NASDDR + R +I + ++
Sbjct: 412 LLCGPPGLGKTTLAHVIARHA------GYSVVEMNASDDRSPEVFRTRIEAATQMESVLG 465
Query: 517 AG--PKLIILDEADAMTNDAQNALRRIIEK 600
AG P +++DE D A N L I+ +
Sbjct: 466 AGGKPNCLVIDEIDGAPVAAINVLLSILNR 495
Score = 29.1 bits (62), Expect(2) = 9e-07
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +1
Query: 622 CIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGMKALLTWSGG 801
CI + + L+ + F P ++V RLQE+ +G++ G + AL +
Sbjct: 529 CICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDN 588
Query: 802 DM 807
D+
Sbjct: 589 DI 590
>BC018184-1|AAH18184.1| 975|Homo sapiens CTF18, chromosome
transmission fidelity factor 18 homolog (S. cerevisiae)
protein.
Length = 975
Score = 44.0 bits (99), Expect(2) = 9e-07
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFK 516
L GPPG GKT+ A+ V+E+NASDDR + R +I + ++
Sbjct: 371 LLCGPPGLGKTTLAHVIARHA------GYSVVEMNASDDRSPEVFRTRIEAATQMESVLG 424
Query: 517 AG--PKLIILDEADAMTNDAQNALRRIIEK 600
AG P +++DE D A N L I+ +
Sbjct: 425 AGGKPNCLVIDEIDGAPVAAINVLLSILNR 454
Score = 29.1 bits (62), Expect(2) = 9e-07
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +1
Query: 622 CIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGMKALLTWSGG 801
CI + + L+ + F P ++V RLQE+ +G++ G + AL +
Sbjct: 488 CICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDN 547
Query: 802 DM 807
D+
Sbjct: 548 DI 549
>BC006278-1|AAH06278.2| 975|Homo sapiens CTF18, chromosome
transmission fidelity factor 18 homolog (S. cerevisiae)
protein.
Length = 975
Score = 44.0 bits (99), Expect(2) = 9e-07
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFK 516
L GPPG GKT+ A+ V+E+NASDDR + R +I + ++
Sbjct: 371 LLCGPPGLGKTTLAHVIARHA------GYSVVEMNASDDRSPEVFRTRIEAATQMESVLG 424
Query: 517 AG--PKLIILDEADAMTNDAQNALRRIIEK 600
AG P +++DE D A N L I+ +
Sbjct: 425 AGGKPNCLVIDEIDGAPVAAINVLLSILNR 454
Score = 29.1 bits (62), Expect(2) = 9e-07
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +1
Query: 622 CIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGMKALLTWSGG 801
CI + + L+ + F P ++V RLQE+ +G++ G + AL +
Sbjct: 488 CICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDN 547
Query: 802 DM 807
D+
Sbjct: 548 DI 549
>AL031033-2|CAB53056.1| 260|Homo sapiens protein ( Human DNA
sequence from clone LA16c-321D2 on chromosome 16
Contains a gene for a Ribosomal Large Subunit
Pseudouridine Synthase (EC ).
Length = 260
Score = 44.0 bits (99), Expect(2) = 8e-06
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFK 516
L GPPG GKT+ A+ V+E+NASDDR + R +I + ++
Sbjct: 93 LLCGPPGLGKTTLAHVIARHA------GYSVVEMNASDDRSPEVFRTRIEAATQMESVLG 146
Query: 517 AG--PKLIILDEADAMTNDAQNALRRIIEK 600
AG P +++DE D A N L I+ +
Sbjct: 147 AGGKPNCLVIDEIDGAPVAAINVLLSILNR 176
Score = 25.8 bits (54), Expect(2) = 8e-06
Identities = 12/49 (24%), Positives = 22/49 (44%)
Frame = +1
Query: 622 CIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEG 768
CI + + L+ + F P ++V RLQE+ +G++ G
Sbjct: 210 CICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPG 258
>L23320-1|AAA16121.1| 1148|Homo sapiens replication factor C large
subunit protein.
Length = 1148
Score = 46.8 bits (106), Expect = 9e-05
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 14/174 (8%)
Frame = +1
Query: 337 LFYGPPGTGKTSTI-LACAKQMYTPQQFSSMVLELNASDDR---GIGIVRGQILSFASTR 504
L GPPG GKT+T L C Q+ +ELNASD R + + + L+ S +
Sbjct: 648 LLSGPPGVGKTTTASLVC-------QELGYSYVELNASDTRSKSSLKAIVAESLNNTSIK 700
Query: 505 TIFKAG-------PKLIILDEADAMT-NDAQNALRRIIE--KYTENVRFCIICNYLGKII 654
+ G +I+DE D M N+ + ++ +I K+T+ C+ + I
Sbjct: 701 GFYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKI 760
Query: 655 PALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGMKALLTWSGGDMXKV 816
+L C RF + +QI + I EG+K+ M ++ + D+ +V
Sbjct: 761 RSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQV 814
>BC051786-1|AAH51786.1| 1148|Homo sapiens RFC1 protein protein.
Length = 1148
Score = 46.8 bits (106), Expect = 9e-05
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 14/174 (8%)
Frame = +1
Query: 337 LFYGPPGTGKTSTI-LACAKQMYTPQQFSSMVLELNASDDR---GIGIVRGQILSFASTR 504
L GPPG GKT+T L C Q+ +ELNASD R + + + L+ S +
Sbjct: 648 LLSGPPGVGKTTTASLVC-------QELGYSYVELNASDTRSKSSLKAIVAESLNNTSIK 700
Query: 505 TIFKAG-------PKLIILDEADAMT-NDAQNALRRIIE--KYTENVRFCIICNYLGKII 654
+ G +I+DE D M N+ + ++ +I K+T+ C+ + I
Sbjct: 701 GFYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKI 760
Query: 655 PALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGMKALLTWSGGDMXKV 816
+L C RF + +QI + I EG+K+ M ++ + D+ +V
Sbjct: 761 RSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQV 814
>BC051751-1|AAH51751.1| 1147|Homo sapiens replication factor C
(activator 1) 1, 145kDa protein.
Length = 1147
Score = 46.8 bits (106), Expect = 9e-05
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 14/174 (8%)
Frame = +1
Query: 337 LFYGPPGTGKTSTI-LACAKQMYTPQQFSSMVLELNASDDR---GIGIVRGQILSFASTR 504
L GPPG GKT+T L C Q+ +ELNASD R + + + L+ S +
Sbjct: 647 LLSGPPGVGKTTTASLVC-------QELGYSYVELNASDTRSKSSLKAIVAESLNNTSIK 699
Query: 505 TIFKAG-------PKLIILDEADAMT-NDAQNALRRIIE--KYTENVRFCIICNYLGKII 654
+ G +I+DE D M N+ + ++ +I K+T+ C+ + I
Sbjct: 700 GFYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKI 759
Query: 655 PALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGMKALLTWSGGDMXKV 816
+L C RF + +QI + I EG+K+ M ++ + D+ +V
Sbjct: 760 RSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQV 813
>BC035297-1|AAH35297.1| 1148|Homo sapiens replication factor C
(activator 1) 1, 145kDa protein.
Length = 1148
Score = 46.8 bits (106), Expect = 9e-05
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 14/174 (8%)
Frame = +1
Query: 337 LFYGPPGTGKTSTI-LACAKQMYTPQQFSSMVLELNASDDR---GIGIVRGQILSFASTR 504
L GPPG GKT+T L C Q+ +ELNASD R + + + L+ S +
Sbjct: 648 LLSGPPGVGKTTTASLVC-------QELGYSYVELNASDTRSKSSLKAIVAESLNNTSIK 700
Query: 505 TIFKAG-------PKLIILDEADAMT-NDAQNALRRIIE--KYTENVRFCIICNYLGKII 654
+ G +I+DE D M N+ + ++ +I K+T+ C+ + I
Sbjct: 701 GFYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKI 760
Query: 655 PALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGMKALLTWSGGDMXKV 816
+L C RF + +QI + I EG+K+ M ++ + D+ +V
Sbjct: 761 RSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQV 814
>AY600371-1|AAS94325.1| 1147|Homo sapiens replication factor C
(activator 1) 1, 145kDa protein.
Length = 1147
Score = 46.8 bits (106), Expect = 9e-05
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 14/174 (8%)
Frame = +1
Query: 337 LFYGPPGTGKTSTI-LACAKQMYTPQQFSSMVLELNASDDR---GIGIVRGQILSFASTR 504
L GPPG GKT+T L C Q+ +ELNASD R + + + L+ S +
Sbjct: 647 LLSGPPGVGKTTTASLVC-------QELGYSYVELNASDTRSKSSLKAIVAESLNNTSIK 699
Query: 505 TIFKAG-------PKLIILDEADAMT-NDAQNALRRIIE--KYTENVRFCIICNYLGKII 654
+ G +I+DE D M N+ + ++ +I K+T+ C+ + I
Sbjct: 700 GFYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKI 759
Query: 655 PALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGMKALLTWSGGDMXKV 816
+L C RF + +QI + I EG+K+ M ++ + D+ +V
Sbjct: 760 RSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQV 813
>Z22642-1|CAA80355.1| 1147|Homo sapiens PO-GA protein.
Length = 1147
Score = 44.8 bits (101), Expect = 4e-04
Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 14/174 (8%)
Frame = +1
Query: 337 LFYGPPGTGKTSTI-LACAKQMYTPQQFSSMVLELNASDDR---GIGIVRGQILSFASTR 504
L GPPG GKT+T L C Q+ +ELN SD R + + + L+ S +
Sbjct: 647 LLSGPPGVGKTTTASLVC-------QELGYSYVELNRSDTRSKSSLKAIVAESLNNTSIK 699
Query: 505 TIFKAG-------PKLIILDEADAMT-NDAQNALRRIIE--KYTENVRFCIICNYLGKII 654
+ G +I+DE D M N+ + ++ +I K+T+ C+ + I
Sbjct: 700 GFYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKI 759
Query: 655 PALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGMKALLTWSGGDMXKV 816
+L C RF + +QI + I EG+K+ M ++ + D+ +V
Sbjct: 760 RSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQV 813
>AF040250-1|AAB99788.1| 1147|Homo sapiens DNA binding protein protein.
Length = 1147
Score = 44.8 bits (101), Expect = 4e-04
Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 14/174 (8%)
Frame = +1
Query: 337 LFYGPPGTGKTSTI-LACAKQMYTPQQFSSMVLELNASDDR---GIGIVRGQILSFASTR 504
L GPPG GKT+T L C Q+ +ELN SD R + + + L+ S +
Sbjct: 647 LLSGPPGVGKTTTASLVC-------QELGYSYVELNRSDTRSKSSLKAIVAESLNNTSIK 699
Query: 505 TIFKAG-------PKLIILDEADAMT-NDAQNALRRIIE--KYTENVRFCIICNYLGKII 654
+ G +I+DE D M N+ + ++ +I K+T+ C+ + I
Sbjct: 700 GFYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKI 759
Query: 655 PALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGMKALLTWSGGDMXKV 816
+L C RF + +QI + I EG+K+ M ++ + D+ +V
Sbjct: 760 RSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQV 813
>AE006465-2|AAK61256.1| 1184|Homo sapiens some homology with
holliday junction DNA helicase RUVB like protein.
Length = 1184
Score = 44.0 bits (99), Expect = 7e-04
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFK 516
L GPPG GKT+ A+ V+E+NASDDR + R +I + ++
Sbjct: 566 LLCGPPGLGKTTLAHVIARHA------GYSVVEMNASDDRSPEVFRTRIEAATQMESVLG 619
Query: 517 AG--PKLIILDEADAMTNDAQNALRRIIEK 600
AG P +++DE D A N L I+ +
Sbjct: 620 AGGKPNCLVIDEIDGAPVAAINVLLSILNR 649
>AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 445
Score = 39.9 bits (89), Expect = 0.011
Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 3/172 (1%)
Frame = +1
Query: 247 RPKRLDDLVSHDDII---KTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQF 417
RP L D + + ++ N++P L+ +GPPG GKT+ A ++
Sbjct: 12 RPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIAS---NSKKH 68
Query: 418 SSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIE 597
S + L+A++ + VR I + ++ FK ++ +DE Q+ +E
Sbjct: 69 SIRFVTLSATNAK-TNDVRDVIKQAQNEKSFFKR-KTILFIDEIHRFNKSQQDTFLPHVE 126
Query: 598 KYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGV 753
T + N ++ AL SRC L + +V L + + G+
Sbjct: 127 CGTITLIGATTENPSFQVNAALLSRCRVIVLEKLPVEAMVTILMRAINSLGI 178
>AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 665
Score = 39.9 bits (89), Expect = 0.011
Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 3/172 (1%)
Frame = +1
Query: 247 RPKRLDDLVSHDDII---KTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQF 417
RP L D + + ++ N++P L+ +GPPG GKT+ A ++
Sbjct: 232 RPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIAS---NSKKH 288
Query: 418 SSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIE 597
S + L+A++ + VR I + ++ FK ++ +DE Q+ +E
Sbjct: 289 SIRFVTLSATNAK-TNDVRDVIKQAQNEKSFFKR-KTILFIDEIHRFNKSQQDTFLPHVE 346
Query: 598 KYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGV 753
T + N ++ AL SRC L + +V L + + G+
Sbjct: 347 CGTITLIGATTENPSFQVNAALLSRCRVIVLEKLPVEAMVTILMRAINSLGI 398
>AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 665
Score = 39.9 bits (89), Expect = 0.011
Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 3/172 (1%)
Frame = +1
Query: 247 RPKRLDDLVSHDDII---KTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQF 417
RP L D + + ++ N++P L+ +GPPG GKT+ A ++
Sbjct: 232 RPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIAS---NSKKH 288
Query: 418 SSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIE 597
S + L+A++ + VR I + ++ FK ++ +DE Q+ +E
Sbjct: 289 SIRFVTLSATNAK-TNDVRDVIKQAQNEKSFFKR-KTILFIDEIHRFNKSQQDTFLPHVE 346
Query: 598 KYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGV 753
T + N ++ AL SRC L + +V L + + G+
Sbjct: 347 CGTITLIGATTENPSFQVNAALLSRCRVIVLEKLPVEAMVTILMRAINSLGI 398
>AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL
protein.
Length = 445
Score = 39.9 bits (89), Expect = 0.011
Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 3/172 (1%)
Frame = +1
Query: 247 RPKRLDDLVSHDDII---KTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQF 417
RP L D + + ++ N++P L+ +GPPG GKT+ A ++
Sbjct: 12 RPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIAS---NSKKH 68
Query: 418 SSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIE 597
S + L+A++ + VR I + ++ FK ++ +DE Q+ +E
Sbjct: 69 SIRFVTLSATNAK-TNDVRDVIKQAQNEKSFFKR-KTILFIDEIHRFNKSQQDTFLPHVE 126
Query: 598 KYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGV 753
T + N ++ AL SRC L + +V L + + G+
Sbjct: 127 CGTITLIGATTENPSFQVNAALLSRCRVIVLEKLPVEAMVTILMRAINSLGI 178
>AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 646
Score = 39.9 bits (89), Expect = 0.011
Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 3/172 (1%)
Frame = +1
Query: 247 RPKRLDDLVSHDDII---KTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQF 417
RP L D + + ++ N++P L+ +GPPG GKT+ A ++
Sbjct: 213 RPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIAS---NSKKH 269
Query: 418 SSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIE 597
S + L+A++ + VR I + ++ FK ++ +DE Q+ +E
Sbjct: 270 SIRFVTLSATNAK-TNDVRDVIKQAQNEKSFFKR-KTILFIDEIHRFNKSQQDTFLPHVE 327
Query: 598 KYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGV 753
T + N ++ AL SRC L + +V L + + G+
Sbjct: 328 CGTITLIGATTENPSFQVNAALLSRCRVIVLEKLPVEAMVTILMRAINSLGI 379
>AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase
interacting protein protein.
Length = 665
Score = 37.9 bits (84), Expect = 0.043
Identities = 38/172 (22%), Positives = 69/172 (40%), Gaps = 3/172 (1%)
Frame = +1
Query: 247 RPKRLDDLVSHDDII---KTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQF 417
RP L D + + ++ N++P L +GPPG GKT+ A ++
Sbjct: 232 RPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLNLWGPPGCGKTTLAHIIAS---NSKKH 288
Query: 418 SSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIE 597
S + L+A++ + VR I + ++ FK ++ +DE Q+ +E
Sbjct: 289 SIRFVTLSATNAK-TNDVRDVIKQAQNEKSFFKR-KTILFIDEIHRFNKSQQDTFLPHVE 346
Query: 598 KYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGV 753
T + N ++ AL SRC L + +V L + + G+
Sbjct: 347 CGTITLIGATTENPSFQVNAALLSRCRVIVLEKLPVEAMVTILMRAINSLGI 398
>BX537441-1|CAD97683.1| 670|Homo sapiens hypothetical protein
protein.
Length = 670
Score = 35.9 bits (79), Expect = 0.18
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPH--------LLFYGPPGTGKTSTILACA 390
V+KY+P+ +L H I+ + ++K L LL GPPG GKT+T+ +
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 391 KQ 396
K+
Sbjct: 141 KE 142
>BC032304-1|AAH32304.1| 670|Homo sapiens RAD17 homolog (S. pombe)
protein.
Length = 670
Score = 35.9 bits (79), Expect = 0.18
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPH--------LLFYGPPGTGKTSTILACA 390
V+KY+P+ +L H I+ + ++K L LL GPPG GKT+T+ +
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 391 KQ 396
K+
Sbjct: 141 KE 142
>AY612854-1|AAT09763.1| 670|Homo sapiens RAD17 homolog (S. pombe)
protein.
Length = 670
Score = 35.9 bits (79), Expect = 0.18
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPH--------LLFYGPPGTGKTSTILACA 390
V+KY+P+ +L H I+ + ++K L LL GPPG GKT+T+ +
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 391 KQ 396
K+
Sbjct: 141 KE 142
>AJ131296-1|CAB46364.1| 670|Homo sapiens HRAD17 protein protein.
Length = 670
Score = 35.9 bits (79), Expect = 0.18
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPH--------LLFYGPPGTGKTSTILACA 390
V+KY+P+ +L H I+ + ++K L LL GPPG GKT+T+ +
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 391 KQ 396
K+
Sbjct: 141 KE 142
>AJ004977-1|CAA06251.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 35.9 bits (79), Expect = 0.18
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPH--------LLFYGPPGTGKTSTILACA 390
V+KY+P+ +L H I+ + ++K L LL GPPG GKT+T+ +
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 391 KQ 396
K+
Sbjct: 141 KE 142
>AJ001642-1|CAA04894.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 35.9 bits (79), Expect = 0.18
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPH--------LLFYGPPGTGKTSTILACA 390
V+KY+P+ +L H I+ + ++K L LL GPPG GKT+T+ +
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 391 KQ 396
K+
Sbjct: 141 KE 142
>AF126424-1|AAD17334.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 35.9 bits (79), Expect = 0.18
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPH--------LLFYGPPGTGKTSTILACA 390
V+KY+P+ +L H I+ + ++K L LL GPPG GKT+T+ +
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 391 KQ 396
K+
Sbjct: 141 KE 142
>AF112263-1|AAD38878.1| 670|Homo sapiens hRad17 protein protein.
Length = 670
Score = 35.9 bits (79), Expect = 0.18
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPH--------LLFYGPPGTGKTSTILACA 390
V+KY+P+ +L H I+ + ++K L LL GPPG GKT+T+ +
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 391 KQ 396
K+
Sbjct: 141 KE 142
>AF085736-1|AAC36334.1| 681|Homo sapiens RF-C/activator 1 homolog
protein.
Length = 681
Score = 35.9 bits (79), Expect = 0.18
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPH--------LLFYGPPGTGKTSTILACA 390
V+KY+P+ +L H I+ + ++K L LL GPPG GKT+T+ +
Sbjct: 92 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 151
Query: 391 KQ 396
K+
Sbjct: 152 KE 153
>AF076838-1|AAC95520.1| 670|Homo sapiens Rad17-like protein
protein.
Length = 670
Score = 35.9 bits (79), Expect = 0.18
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPH--------LLFYGPPGTGKTSTILACA 390
V+KY+P+ +L H I+ + ++K L LL GPPG GKT+T+ +
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 391 KQ 396
K+
Sbjct: 141 KE 142
>AF017748-1|AAD01620.1| 670|Homo sapiens cell cycle checkpoint
protein RAD17 protein.
Length = 670
Score = 35.9 bits (79), Expect = 0.18
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPH--------LLFYGPPGTGKTSTILACA 390
V+KY+P+ +L H I+ + ++K L LL GPPG GKT+T+ +
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 391 KQ 396
K+
Sbjct: 141 KE 142
>X76040-1|CAA53625.1| 937|Homo sapiens Lon protease-like protein
protein.
Length = 937
Score = 35.5 bits (78), Expect = 0.23
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Frame = +1
Query: 262 DDLVSHDDIIKTINQFMKENQLPH------LLFYGPPGTGKTSTILACAKQMYTPQ-QFS 420
+D +D+ K I +F+ +QL L FYGPPG GKTS + A+ + +FS
Sbjct: 467 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 526
Query: 421 ----SMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM----TNDAQN 576
+ V E+ +G + G+I+ K LI++DE D + D +
Sbjct: 527 VGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKT---KTENPLILIDEVDKIGRGYQGDPSS 583
Query: 577 ALRRIIEKYTENVRF 621
AL +++ +N F
Sbjct: 584 ALLELLDP-EQNANF 597
>X74215-1|CAA52291.1| 845|Homo sapiens Lon protease-like protein
protein.
Length = 845
Score = 35.5 bits (78), Expect = 0.23
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Frame = +1
Query: 262 DDLVSHDDIIKTINQFMKENQLPH------LLFYGPPGTGKTSTILACAKQMYTPQ-QFS 420
+D +D+ K I +F+ +QL L FYGPPG GKTS + A+ + +FS
Sbjct: 375 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 434
Query: 421 ----SMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM----TNDAQN 576
+ V E+ +G + G+I+ K LI++DE D + D +
Sbjct: 435 VGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKT---KTENPLILIDEVDKIGRGYQGDPSS 491
Query: 577 ALRRIIEKYTENVRF 621
AL +++ +N F
Sbjct: 492 ALLELLDP-EQNANF 505
>U02389-1|AAA61616.1| 962|Homo sapiens hLON ATP-dependent protease
protein.
Length = 962
Score = 35.5 bits (78), Expect = 0.23
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Frame = +1
Query: 262 DDLVSHDDIIKTINQFMKENQLPH------LLFYGPPGTGKTSTILACAKQMYTPQ-QFS 420
+D +D+ K I +F+ +QL L FYGPPG GKTS + A+ + +FS
Sbjct: 492 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 551
Query: 421 ----SMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM----TNDAQN 576
+ V E+ +G + G+I+ K LI++DE D + D +
Sbjct: 552 VGGMTDVTEIKGHRRTYVGAMPGKIIQCLKKT---KTENPLILIDEVDKIGRGYQGDPSS 608
Query: 577 ALRRIIEKYTENVRF 621
AL +++ +N F
Sbjct: 609 ALLELLDP-EQNANF 622
>M34079-1|AAA36666.1| 404|Homo sapiens protein ( Human
immunodeficiency virus tat transactivator binding
protein-1 (tbp-1) mRNA, complete cds. ).
Length = 404
Score = 35.5 bits (78), Expect = 0.23
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTP--QQFSSMVLELNASDDRGIGIVRGQILSFASTRT 507
+L YGPPGTGKT ACA Q + ++++ D G +VR +FA +
Sbjct: 188 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKLVRD---AFALAK- 241
Query: 508 IFKAGPKLIILDEADAM 558
+ P +I +DE DA+
Sbjct: 242 --EKAPSIIFIDELDAI 256
>CR456731-1|CAG33012.1| 404|Homo sapiens PSMC3 protein.
Length = 404
Score = 35.5 bits (78), Expect = 0.23
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTP--QQFSSMVLELNASDDRGIGIVRGQILSFASTRT 507
+L YGPPGTGKT ACA Q + ++++ D G +VR +FA +
Sbjct: 188 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKLVRD---AFALAK- 241
Query: 508 IFKAGPKLIILDEADAM 558
+ P +I +DE DA+
Sbjct: 242 --EKAPSIIFIDELDAI 256
>BC107804-1|AAI07805.1| 491|Homo sapiens PSMC3 protein protein.
Length = 491
Score = 35.5 bits (78), Expect = 0.23
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTP--QQFSSMVLELNASDDRGIGIVRGQILSFASTRT 507
+L YGPPGTGKT ACA Q + ++++ D G +VR +FA +
Sbjct: 275 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKLVRD---AFALAK- 328
Query: 508 IFKAGPKLIILDEADAM 558
+ P +I +DE DA+
Sbjct: 329 --EKAPSIIFIDELDAI 343
>BC106920-1|AAI06921.1| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 35.5 bits (78), Expect = 0.23
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTP--QQFSSMVLELNASDDRGIGIVRGQILSFASTRT 507
+L YGPPGTGKT ACA Q + ++++ D G +VR +FA +
Sbjct: 223 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKLVRD---AFALAK- 276
Query: 508 IFKAGPKLIILDEADAM 558
+ P +I +DE DA+
Sbjct: 277 --EKAPSIIFIDELDAI 291
>BC073165-1|AAH73165.3| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 35.5 bits (78), Expect = 0.23
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTP--QQFSSMVLELNASDDRGIGIVRGQILSFASTRT 507
+L YGPPGTGKT ACA Q + ++++ D G +VR +FA +
Sbjct: 223 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKLVRD---AFALAK- 276
Query: 508 IFKAGPKLIILDEADAM 558
+ P +I +DE DA+
Sbjct: 277 --EKAPSIIFIDELDAI 291
>BC008713-1|AAH08713.4| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 35.5 bits (78), Expect = 0.23
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTP--QQFSSMVLELNASDDRGIGIVRGQILSFASTRT 507
+L YGPPGTGKT ACA Q + ++++ D G +VR +FA +
Sbjct: 223 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKLVRD---AFALAK- 276
Query: 508 IFKAGPKLIILDEADAM 558
+ P +I +DE DA+
Sbjct: 277 --EKAPSIIFIDELDAI 291
>BC004934-1|AAH04934.1| 517|Homo sapiens Unknown (protein for
IMAGE:3606377) protein.
Length = 517
Score = 35.5 bits (78), Expect = 0.23
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Frame = +1
Query: 262 DDLVSHDDIIKTINQFMKENQLPH------LLFYGPPGTGKTSTILACAKQMYTPQ-QFS 420
+D +D+ K I +F+ +QL L FYGPPG GKTS + A+ + +FS
Sbjct: 47 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 106
Query: 421 ----SMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM----TNDAQN 576
+ V E+ +G + G+I+ K LI++DE D + D +
Sbjct: 107 VGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKT---KTENPLILIDEVDKIGRGYQGDPSS 163
Query: 577 ALRRIIEKYTENVRF 621
AL +++ +N F
Sbjct: 164 ALLELLDP-EQNANF 177
>BC000235-1|AAH00235.1| 959|Homo sapiens lon peptidase 1,
mitochondrial protein.
Length = 959
Score = 35.5 bits (78), Expect = 0.23
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Frame = +1
Query: 262 DDLVSHDDIIKTINQFMKENQLPH------LLFYGPPGTGKTSTILACAKQMYTPQ-QFS 420
+D +D+ K I +F+ +QL L FYGPPG GKTS + A+ + +FS
Sbjct: 489 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 548
Query: 421 ----SMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM----TNDAQN 576
+ V E+ +G + G+I+ K LI++DE D + D +
Sbjct: 549 VGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKT---KTENPLILIDEVDKIGRGYQGDPSS 605
Query: 577 ALRRIIEKYTENVRF 621
AL +++ +N F
Sbjct: 606 ALLELLDP-EQNANF 619
>AK222485-1|BAD96205.1| 424|Homo sapiens proteasome 26S ATPase
subunit 3 variant protein.
Length = 424
Score = 35.5 bits (78), Expect = 0.23
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTP--QQFSSMVLELNASDDRGIGIVRGQILSFASTRT 507
+L YGPPGTGKT ACA Q + ++++ D G +VR +FA +
Sbjct: 208 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKLVRD---AFALAK- 261
Query: 508 IFKAGPKLIILDEADAM 558
+ P +I +DE DA+
Sbjct: 262 --EKAPSIIFIDELDAI 276
>AK096626-1|BAC04829.1| 895|Homo sapiens protein ( Homo sapiens
cDNA FLJ39307 fis, clone OCBBF2013208, highly similar to
MITOCHONDRIAL LON PROTEASE PRECURSOR (EC 3.4.21.-). ).
Length = 895
Score = 35.5 bits (78), Expect = 0.23
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Frame = +1
Query: 262 DDLVSHDDIIKTINQFMKENQLPH------LLFYGPPGTGKTSTILACAKQMYTPQ-QFS 420
+D +D+ K I +F+ +QL L FYGPPG GKTS + A+ + +FS
Sbjct: 425 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 484
Query: 421 ----SMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM----TNDAQN 576
+ V E+ +G + G+I+ K LI++DE D + D +
Sbjct: 485 VGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKT---KTENPLILIDEVDKIGRGYQGDPSS 541
Query: 577 ALRRIIEKYTENVRF 621
AL +++ +N F
Sbjct: 542 ALLELLDP-EQNANF 555
>AF059309-1|AAD24414.1| 959|Homo sapiens LON protease protein.
Length = 959
Score = 35.5 bits (78), Expect = 0.23
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Frame = +1
Query: 262 DDLVSHDDIIKTINQFMKENQLPH------LLFYGPPGTGKTSTILACAKQMYTPQ-QFS 420
+D +D+ K I +F+ +QL L FYGPPG GKTS + A+ + +FS
Sbjct: 489 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 548
Query: 421 ----SMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM----TNDAQN 576
+ V E+ +G + G+I+ K LI++DE D + D +
Sbjct: 549 VGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKT---KTENPLILIDEVDKIGRGYQGDPSS 605
Query: 577 ALRRIIEKYTENVRF 621
AL +++ +N F
Sbjct: 606 ALLELLDP-EQNANF 619
>BC109218-1|AAI09219.1| 848|Homo sapiens LONP1 protein protein.
Length = 848
Score = 35.1 bits (77), Expect = 0.31
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Frame = +1
Query: 262 DDLVSHDDIIKTINQFMKENQLPH------LLFYGPPGTGKTSTILACAKQMYTPQ-QFS 420
+D +D+ K I +F+ +QL L FYGPPG GKTS + A+ + +FS
Sbjct: 378 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 437
Query: 421 ----SMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEAD 552
+ V E+ +G + G+I+ K LI++DE D
Sbjct: 438 VGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKT---KTENPLILIDEVD 482
>CR456466-1|CAG30352.1| 1211|Homo sapiens dJ402G11.8 protein.
Length = 1211
Score = 34.3 bits (75), Expect = 0.53
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 325 LPHLLFYGPPGTGKTSTILACAKQMY 402
LP++LF GPPGTGKT TI+ Q++
Sbjct: 764 LPYILF-GPPGTGKTVTIIEAVLQVH 788
>BC150137-1|AAI50138.1| 1165|Homo sapiens MOV10L1 protein protein.
Length = 1165
Score = 34.3 bits (75), Expect = 0.53
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 325 LPHLLFYGPPGTGKTSTILACAKQMY 402
LP++LF GPPGTGKT TI+ Q++
Sbjct: 764 LPYILF-GPPGTGKTVTIIEAVLQVH 788
>BC110434-1|AAI10435.1| 598|Homo sapiens LONP2 protein protein.
Length = 598
Score = 34.3 bits (75), Expect = 0.53
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Frame = +1
Query: 298 INQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVL--ELNASDDRG---- 459
+ Q + P L F GPPG GKTS + AK + ++F + L + SD RG
Sbjct: 105 VRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTL--GREFHRIALGGVCDQSDIRGHRRT 162
Query: 460 -IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQ 573
+G + G+I++ +T+ P + +LDE D + Q
Sbjct: 163 YVGSMPGRIIN--GLKTVGVNNP-VFLLDEVDKLGKSLQ 198
>BC093912-1|AAH93912.1| 852|Homo sapiens lon peptidase 2,
peroxisomal protein.
Length = 852
Score = 34.3 bits (75), Expect = 0.53
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Frame = +1
Query: 298 INQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVL--ELNASDDRG---- 459
+ Q + P L F GPPG GKTS + AK + ++F + L + SD RG
Sbjct: 359 VRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTL--GREFHRIALGGVCDQSDIRGHRRT 416
Query: 460 -IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQ 573
+G + G+I++ +T+ P + +LDE D + Q
Sbjct: 417 YVGSMPGRIIN--GLKTVGVNNP-VFLLDEVDKLGKSLQ 452
>BC093910-1|AAH93910.1| 852|Homo sapiens lon peptidase 2,
peroxisomal protein.
Length = 852
Score = 34.3 bits (75), Expect = 0.53
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Frame = +1
Query: 298 INQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVL--ELNASDDRG---- 459
+ Q + P L F GPPG GKTS + AK + ++F + L + SD RG
Sbjct: 359 VRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTL--GREFHRIALGGVCDQSDIRGHRRT 416
Query: 460 -IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQ 573
+G + G+I++ +T+ P + +LDE D + Q
Sbjct: 417 YVGSMPGRIIN--GLKTVGVNNP-VFLLDEVDKLGKSLQ 452
>BC043423-1|AAH43423.1| 301|Homo sapiens ABCB6 protein protein.
Length = 301
Score = 34.3 bits (75), Expect = 0.53
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 451 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 627
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 181 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 239
Query: 628 ICNYLGKIIPALQ 666
+ + L ++ A Q
Sbjct: 240 VAHRLSTVVNADQ 252
>BC000559-1|AAH00559.1| 842|Homo sapiens ATP-binding cassette,
sub-family B (MDR/TAP), member 6 protein.
Length = 842
Score = 34.3 bits (75), Expect = 0.53
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 451 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 627
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 722 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 780
Query: 628 ICNYLGKIIPALQ 666
+ + L ++ A Q
Sbjct: 781 VAHRLSTVVNADQ 793
>AL834201-1|CAD38889.1| 715|Homo sapiens hypothetical protein
protein.
Length = 715
Score = 34.3 bits (75), Expect = 0.53
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Frame = +1
Query: 298 INQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVL--ELNASDDRG---- 459
+ Q + P L F GPPG GKTS + AK + ++F + L + SD RG
Sbjct: 222 VRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTL--GREFHRIALGGVCDQSDIRGHRRT 279
Query: 460 -IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQ 573
+G + G+I++ +T+ P + +LDE D + Q
Sbjct: 280 YVGSMPGRIIN--GLKTVGVNNP-VFLLDEVDKLGKSLQ 315
>AL034546-1|CAI23226.1| 1211|Homo sapiens protein ( Human DNA
sequence from clone RP5-898I4 on chromosome 22q13.33. ).
Length = 1211
Score = 34.3 bits (75), Expect = 0.53
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 325 LPHLLFYGPPGTGKTSTILACAKQMY 402
LP++LF GPPGTGKT TI+ Q++
Sbjct: 764 LPYILF-GPPGTGKTVTIIEAVLQVH 788
>AL022328-2|CAB63041.1| 417|Homo sapiens protein ( Human DNA
sequence from clone RP3-402G11 on chromosome
22q13.31-13.33. ).
Length = 417
Score = 34.3 bits (75), Expect = 0.53
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 325 LPHLLFYGPPGTGKTSTILACAKQMY 402
LP++LF GPPGTGKT TI+ Q++
Sbjct: 20 LPYILF-GPPGTGKTVTIIEAVLQVH 44
>AL022328-1|CAI42752.1| 1211|Homo sapiens protein ( Human DNA
sequence from clone RP3-402G11 on chromosome
22q13.31-13.33. ).
Length = 1211
Score = 34.3 bits (75), Expect = 0.53
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 325 LPHLLFYGPPGTGKTSTILACAKQMY 402
LP++LF GPPGTGKT TI+ Q++
Sbjct: 764 LPYILF-GPPGTGKTVTIIEAVLQVH 788
>AK172812-1|BAD18782.1| 571|Homo sapiens protein ( Homo sapiens
cDNA FLJ23973 fis, clone HEP18305, highly similar to
ATP-binding cassette, sub-family B, member 6,
mitochondrial precursor. ).
Length = 571
Score = 34.3 bits (75), Expect = 0.53
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 451 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 627
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 451 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 509
Query: 628 ICNYLGKIIPALQ 666
+ + L ++ A Q
Sbjct: 510 VAHRLSTVVNADQ 522
>AK074775-1|BAC11201.1| 852|Homo sapiens protein ( Homo sapiens
cDNA FLJ90294 fis, clone NT2RP2000178, weakly similar to
MITOCHONDRIAL LON PROTEASE HOMOLOG 1 PRECURSOR (EC
3.4.21.-). ).
Length = 852
Score = 34.3 bits (75), Expect = 0.53
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Frame = +1
Query: 298 INQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVL--ELNASDDRG---- 459
+ Q + P L F GPPG GKTS + AK + ++F + L + SD RG
Sbjct: 359 VRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTL--GREFHRIALGGVCDQSDIRGHRRT 416
Query: 460 -IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQ 573
+G + G+I++ +T+ P + +LDE D + Q
Sbjct: 417 YVGSMPGRIIN--GLKTVGVNNP-VFLLDEVDKLGKSLQ 452
>AK057026-1|BAB71347.1| 766|Homo sapiens protein ( Homo sapiens
cDNA FLJ32464 fis, clone SKNMC1000251, highly similar to
Homo sapiens MT-ABC transporter (MTABC) mRNA. ).
Length = 766
Score = 34.3 bits (75), Expect = 0.53
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 451 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 627
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 646 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 704
Query: 628 ICNYLGKIIPALQ 666
+ + L ++ A Q
Sbjct: 705 VAHRLSTVVNADQ 717
>AK027666-1|BAB55278.1| 581|Homo sapiens protein ( Homo sapiens
cDNA FLJ14760 fis, clone NT2RP3003301, moderately
similar to MITOCHONDRIAL LON PROTEASE HOMOLOG 1
PRECURSOR (EC 3.4.21.-). ).
Length = 581
Score = 34.3 bits (75), Expect = 0.53
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Frame = +1
Query: 298 INQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVL--ELNASDDRG---- 459
+ Q + P L F GPPG GKTS + AK + ++F + L + SD RG
Sbjct: 88 VRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTL--GREFHRIALGGVCDQSDIRGHRRT 145
Query: 460 -IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQ 573
+G + G+I++ +T+ P + +LDE D + Q
Sbjct: 146 YVGSMPGRIIN--GLKTVGVNNP-VFLLDEVDKLGKSLQ 181
>AJ548761-1|CAD68987.1| 852|Homo sapiens peroxisomal lon protease
protein.
Length = 852
Score = 34.3 bits (75), Expect = 0.53
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Frame = +1
Query: 298 INQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVL--ELNASDDRG---- 459
+ Q + P L F GPPG GKTS + AK + ++F + L + SD RG
Sbjct: 359 VRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTL--GREFHRIALGGVCDQSDIRGHRRT 416
Query: 460 -IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQ 573
+G + G+I++ +T+ P + +LDE D + Q
Sbjct: 417 YVGSMPGRIIN--GLKTVGVNNP-VFLLDEVDKLGKSLQ 452
>AJ289233-1|CAB95766.2| 842|Homo sapiens ABC transporter umat
protein.
Length = 842
Score = 34.3 bits (75), Expect = 0.53
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 451 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 627
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 722 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 780
Query: 628 ICNYLGKIIPALQ 666
+ + L ++ A Q
Sbjct: 781 VAHRLSTVVNADQ 793
>AF308472-1|AAG33617.1| 896|Homo sapiens ATP-binding cassette
half-transporter protein.
Length = 896
Score = 34.3 bits (75), Expect = 0.53
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 451 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 627
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 776 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 834
Query: 628 ICNYLGKIIPALQ 666
+ + L ++ A Q
Sbjct: 835 VAHRLSTVVNADQ 847
>AF285604-1|AAK31983.1| 1211|Homo sapiens MOV10-like 1 protein.
Length = 1211
Score = 34.3 bits (75), Expect = 0.53
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 325 LPHLLFYGPPGTGKTSTILACAKQMY 402
LP++LF GPPGTGKT TI+ Q++
Sbjct: 764 LPYILF-GPPGTGKTVTIIEAVLQVH 788
>AF076775-1|AAF75107.1| 842|Homo sapiens MT-ABC transporter
protein.
Length = 842
Score = 34.3 bits (75), Expect = 0.53
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 451 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 627
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 722 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 780
Query: 628 ICNYLGKIIPALQ 666
+ + L ++ A Q
Sbjct: 781 VAHRLSTVVNADQ 793
>AF070598-1|AAC28653.1| 511|Homo sapiens ABC transporter protein.
Length = 511
Score = 34.3 bits (75), Expect = 0.53
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 451 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 627
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 391 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 449
Query: 628 ICNYLGKIIPALQ 666
+ + L ++ A Q
Sbjct: 450 VAHRLSTVVNADQ 462
>AB039371-1|BAA96733.1| 842|Homo sapiens mitochondrial ABC
transporter 3 protein.
Length = 842
Score = 34.3 bits (75), Expect = 0.53
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 451 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 627
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 722 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 780
Query: 628 ICNYLGKIIPALQ 666
+ + L ++ A Q
Sbjct: 781 VAHRLSTVVNADQ 793
>BC094881-1|AAH94881.1| 1163|Homo sapiens HELZ protein protein.
Length = 1163
Score = 33.5 bits (73), Expect = 0.93
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 322 QLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVL 432
QLP +L GP GTGKT T+ K + Q+ S +++
Sbjct: 660 QLPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILI 696
>BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 33.5 bits (73), Expect = 0.93
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Frame = +1
Query: 247 RPKRLDDLVSHDDII---KTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQF 417
RP L D + + ++ N++P L+ +GPPG GKT+ A ++
Sbjct: 232 RPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIAS---NSKKH 288
Query: 418 SSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQ 573
S + L+A++ + VR I + ++ FK ++ +DE Q
Sbjct: 289 SIRFVTLSATNAK-TNDVRDVIKQAQNEKSFFKR-KTILFIDEIHRFNKSQQ 338
>BC000981-1|AAH00981.1| 753|Homo sapiens spermatogenesis associated
5-like 1 protein.
Length = 753
Score = 33.5 bits (73), Expect = 0.93
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTP-QQFSSMVLELNASDDRGIGIVRGQILSFASTRTI 510
+L GPPG GKT + A A++ S+ L+ + + + R F R +
Sbjct: 237 VLLAGPPGVGKTQLVQAVAREAGAELLAVSAPALQGSRPGETEENVRR----VFQRAREL 292
Query: 511 FKAGPKLIILDEADAM 558
GP L+ LDE DA+
Sbjct: 293 ASRGPSLLFLDEMDAL 308
>AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility
associated gene 1 protein.
Length = 1844
Score = 33.5 bits (73), Expect = 0.93
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
+L GP G GKT+ + ACA Q+ + E+NAS R + Q+ + +
Sbjct: 1128 VLITGPTGVGKTAAVYACA------QELGFKIFEVNASSQRSGRQILSQLKEATQSHQVD 1181
Query: 514 KAG 522
K G
Sbjct: 1182 KQG 1184
>AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 33.5 bits (73), Expect = 0.93
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Frame = +1
Query: 247 RPKRLDDLVSHDDII---KTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQF 417
RP L D + + ++ N++P L+ +GPPG GKT+ A ++
Sbjct: 232 RPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIAS---NSKKH 288
Query: 418 SSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQ 573
S + L+A++ + VR I + ++ FK ++ +DE Q
Sbjct: 289 SIRFVTLSATNAK-TNDVRDVIKQAQNEKSFFKR-KTILFIDEIHRFNKSQQ 338
>AK023232-1|BAB14482.1| 620|Homo sapiens protein ( Homo sapiens
cDNA FLJ13170 fis, clone NT2RP3003809, weakly similar to
SAV PROTEIN. ).
Length = 620
Score = 33.5 bits (73), Expect = 0.93
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTP-QQFSSMVLELNASDDRGIGIVRGQILSFASTRTI 510
+L GPPG GKT + A A++ S+ L+ + + + R F R +
Sbjct: 237 VLLAGPPGVGKTQLVQAVAREAGAELLAVSAPALQGSRPGETEENVRR----VFQRAREL 292
Query: 511 FKAGPKLIILDEADAM 558
GP L+ LDE DA+
Sbjct: 293 ASRGPSLLFLDEMDAL 308
>AK022797-1|BAB14248.1| 801|Homo sapiens protein ( Homo sapiens
cDNA FLJ12735 fis, clone NT2RP2000258, weakly similar to
ACTIVATOR 1 140 KD SUBUNIT. ).
Length = 801
Score = 33.5 bits (73), Expect = 0.93
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
+L GP G GKT+ + ACA Q+ + E+NAS R + Q+ + +
Sbjct: 725 VLITGPTGVGKTAAVYACA------QELGFKIFEVNASSQRSGRQILSQLKEATQSHQVD 778
Query: 514 KAG 522
K G
Sbjct: 779 KQG 781
>AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protein
protein.
Length = 1844
Score = 33.5 bits (73), Expect = 0.93
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
+L GP G GKT+ + ACA Q+ + E+NAS R + Q+ + +
Sbjct: 1128 VLITGPTGVGKTAAVYACA------QELGFKIFEVNASSQRSGRQILSQLKEATQSHQVD 1181
Query: 514 KAG 522
K G
Sbjct: 1182 KQG 1184
>Y18418-1|CAB46271.1| 456|Homo sapiens erythrocyte cytosolic
protein of 54 kDa, ECP-54 protein.
Length = 456
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 429
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>DQ469310-1|ABF13334.1| 386|Homo sapiens RUVBL1-FK protein.
Length = 386
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 429
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>BT007057-1|AAP35706.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 429
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>BC073998-1|AAH73998.1| 287|Homo sapiens ATAD1 protein protein.
Length = 287
Score = 33.1 bits (72), Expect = 1.2
Identities = 25/82 (30%), Positives = 39/82 (47%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
+L YGPPG GKT A AK+ +F + L+ + D+ G Q L+ A
Sbjct: 129 VLLYGPPGCGKTLIAKATAKE--AGCRFIN--LQPSTLTDKWYG--ESQKLAAAVFSLAI 182
Query: 514 KAGPKLIILDEADAMTNDAQNA 579
K P +I +DE D+ + ++
Sbjct: 183 KLQPSIIFIDEIDSFLRNRSSS 204
>BC063530-1|AAH63530.1| 330|Homo sapiens ATAD1 protein protein.
Length = 330
Score = 33.1 bits (72), Expect = 1.2
Identities = 25/82 (30%), Positives = 39/82 (47%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
+L YGPPG GKT A AK+ +F + L+ + D+ G Q L+ A
Sbjct: 98 VLLYGPPGCGKTLIAKATAKE--AGCRFIN--LQPSTLTDKWYG--ESQKLAAAVFSLAI 151
Query: 514 KAGPKLIILDEADAMTNDAQNA 579
K P +I +DE D+ + ++
Sbjct: 152 KLQPSIIFIDEIDSFLRNRSSS 173
>BC012886-1|AAH12886.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 429
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>BC002993-1|AAH02993.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 429
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>AL391244-1|CAI22656.1| 473|Homo sapiens ATPase family, AAA domain
containing 3C protein.
Length = 473
Score = 33.1 bits (72), Expect = 1.2
Identities = 33/113 (29%), Positives = 51/113 (45%)
Frame = +1
Query: 280 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 459
D I T N H+L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 155 DIAIMTRNIKKNRGLYRHILLYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 212
Query: 460 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 618
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 213 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 255
>AL157945-1|CAI22067.1| 473|Homo sapiens ATPase family, AAA domain
containing 3C protein.
Length = 473
Score = 33.1 bits (72), Expect = 1.2
Identities = 33/113 (29%), Positives = 51/113 (45%)
Frame = +1
Query: 280 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 459
D I T N H+L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 155 DIAIMTRNIKKNRGLYRHILLYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 212
Query: 460 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 618
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 213 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 255
>AL133327-1|CAI16701.1| 361|Homo sapiens ATPase family, AAA domain
containing 1 protein.
Length = 361
Score = 33.1 bits (72), Expect = 1.2
Identities = 25/82 (30%), Positives = 39/82 (47%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
+L YGPPG GKT A AK+ +F + L+ + D+ G Q L+ A
Sbjct: 129 VLLYGPPGCGKTLIAKATAKE--AGCRFIN--LQPSTLTDKWYG--ESQKLAAAVFSLAI 182
Query: 514 KAGPKLIILDEADAMTNDAQNA 579
K P +I +DE D+ + ++
Sbjct: 183 KLQPSIIFIDEIDSFLRNRSSS 204
>AK222575-1|BAD96295.1| 456|Homo sapiens TATA binding protein
interacting protein 49 kDa variant protein.
Length = 456
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 429
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>AK222563-1|BAD96283.1| 456|Homo sapiens TATA binding protein
interacting protein 49 kDa variant protein.
Length = 456
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 429
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>AK075223-1|BAC11482.1| 361|Homo sapiens protein ( Homo sapiens
cDNA FLJ90742 fis, clone PLACE1011181, weakly similar to
MSP1 PROTEIN HOMOLOG. ).
Length = 361
Score = 33.1 bits (72), Expect = 1.2
Identities = 25/82 (30%), Positives = 39/82 (47%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
+L YGPPG GKT A AK+ +F + L+ + D+ G Q L+ A
Sbjct: 129 VLLYGPPGCGKTLIAKATAKE--AGCRFIN--LQPSTLTDKWYG--ESQKLAAAVFSLAI 182
Query: 514 KAGPKLIILDEADAMTNDAQNA 579
K P +I +DE D+ + ++
Sbjct: 183 KLQPSIIFIDEIDSFLRNRSSS 204
>AJ010058-1|CAA08986.1| 456|Homo sapiens Nuclear matrix protein
NMP238 protein.
Length = 456
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 429
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>AF380344-1|AAM45570.1| 456|Homo sapiens pontin 52 protein.
Length = 456
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 429
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>AF099084-1|AAD04427.1| 456|Homo sapiens Pontin52 protein.
Length = 456
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 429
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>AF070735-1|AAC77819.1| 456|Homo sapiens RuvB-like protein RUVBL1
protein.
Length = 456
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 429
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>AB012122-1|BAA28169.1| 456|Homo sapiens TIP49 protein.
Length = 456
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 429
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>BC018701-1|AAH18701.1| 648|Homo sapiens ATPase family, AAA domain
containing 3B protein.
Length = 648
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +1
Query: 280 DDIIKTINQFMKENQLPHLLFYGPPGTGKT 369
D I T N H+L YGPPGTGKT
Sbjct: 330 DIAIATRNTKKNRGLYRHILLYGPPGTGKT 359
>BC002542-1|AAH02542.1| 648|Homo sapiens ATPase family, AAA domain
containing 3B protein.
Length = 648
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +1
Query: 280 DDIIKTINQFMKENQLPHLLFYGPPGTGKT 369
D I T N H+L YGPPGTGKT
Sbjct: 330 DIAIATRNTKKNRGLYRHILLYGPPGTGKT 359
>AL157945-2|CAI22068.1| 648|Homo sapiens ATPase family, AAA domain
containing 3B protein.
Length = 648
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +1
Query: 280 DDIIKTINQFMKENQLPHLLFYGPPGTGKT 369
D I T N H+L YGPPGTGKT
Sbjct: 330 DIAIATRNTKKNRGLYRHILLYGPPGTGKT 359
>AK024028-1|BAB14787.1| 480|Homo sapiens protein ( Homo sapiens
cDNA FLJ13966 fis, clone Y79AA1001394, weakly similar to
CELL DIVISION PROTEIN FTSH HOMOLOG (EC 3.4.24.-). ).
Length = 480
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +1
Query: 280 DDIIKTINQFMKENQLPHLLFYGPPGTGKT 369
D I T N H+L YGPPGTGKT
Sbjct: 162 DIAIATRNTKKNRGLYRHILLYGPPGTGKT 191
>AB033099-1|BAA86587.1| 606|Homo sapiens KIAA1273 protein protein.
Length = 606
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +1
Query: 280 DDIIKTINQFMKENQLPHLLFYGPPGTGKT 369
D I T N H+L YGPPGTGKT
Sbjct: 288 DIAIATRNTKKNRGLYRHILLYGPPGTGKT 317
>BC009312-1|AAH09312.1| 1003|Homo sapiens Mov10, Moloney leukemia
virus 10, homolog (mouse) protein.
Length = 1003
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 328 PHLLFYGPPGTGKTSTILACAKQM 399
P+++F GPPGTGKT T++ KQ+
Sbjct: 519 PYIIF-GPPGTGKTVTLVEAIKQV 541
>BC004499-1|AAH04499.2| 601|Homo sapiens MOV10 protein protein.
Length = 601
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 328 PHLLFYGPPGTGKTSTILACAKQM 399
P+++F GPPGTGKT T++ KQ+
Sbjct: 117 PYIIF-GPPGTGKTVTLVEAIKQV 139
>BC002548-1|AAH02548.1| 1003|Homo sapiens Mov10, Moloney leukemia
virus 10, homolog (mouse) protein.
Length = 1003
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 328 PHLLFYGPPGTGKTSTILACAKQM 399
P+++F GPPGTGKT T++ KQ+
Sbjct: 519 PYIIF-GPPGTGKTVTLVEAIKQV 541
>AL603832-3|CAI14056.1| 947|Homo sapiens Mov10, Moloney leukemia
virus 10, homolog (mouse) protein.
Length = 947
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 328 PHLLFYGPPGTGKTSTILACAKQM 399
P+++F GPPGTGKT T++ KQ+
Sbjct: 463 PYIIF-GPPGTGKTVTLVEAIKQV 485
>AL603832-2|CAI14055.1| 1003|Homo sapiens Mov10, Moloney leukemia
virus 10, homolog (mouse) protein.
Length = 1003
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 328 PHLLFYGPPGTGKTSTILACAKQM 399
P+++F GPPGTGKT T++ KQ+
Sbjct: 519 PYIIF-GPPGTGKTVTLVEAIKQV 541
>AK074174-1|BAB85000.1| 925|Homo sapiens FLJ00247 protein protein.
Length = 925
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 328 PHLLFYGPPGTGKTSTILACAKQM 399
P+++F GPPGTGKT T++ KQ+
Sbjct: 544 PYIIF-GPPGTGKTVTLVEAIKQV 566
>AB046851-1|BAB13457.1| 1032|Homo sapiens KIAA1631 protein protein.
Length = 1032
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 328 PHLLFYGPPGTGKTSTILACAKQM 399
P+++F GPPGTGKT T++ KQ+
Sbjct: 548 PYIIF-GPPGTGKTVTLVEAIKQV 570
>BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein.
Length = 475
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 253 KRLDDLVSHDDIIKTINQFMKENQLPH--LLFYGPPGTGKTSTILACAKQ 396
+ L +LV + ++ ++F+K P +LFYGPPG GKT A A +
Sbjct: 156 RELQELVQYP--VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 203
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 253 KRLDDLVSHDDIIKTINQFMKENQLPH--LLFYGPPGTGKTSTILACAKQ 396
+ L +LV + ++ ++F+K P +LFYGPPG GKT A A +
Sbjct: 487 RELQELVQYP--VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
>BC113656-1|AAI13657.1| 1390|Homo sapiens ATPase family, AAA domain
containing 2 protein.
Length = 1390
Score = 31.9 bits (69), Expect = 2.9
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASD-DRGIGIVRGQI-LSFASTRTI 510
LFYGPPGTGKT A A + + + + A + +G Q+ L F
Sbjct: 464 LFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQA--- 520
Query: 511 FKAGPKLIILDEADAM 558
++ P +I DE D +
Sbjct: 521 YQMRPSIIFFDEIDGL 536
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 253 KRLDDLVSHDDIIKTINQFMKENQLPH--LLFYGPPGTGKTSTILACAKQ 396
+ L +LV + ++ ++F+K P +LFYGPPG GKT A A +
Sbjct: 487 RELQELVQYP--VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 253 KRLDDLVSHDDIIKTINQFMKENQLPH--LLFYGPPGTGKTSTILACAKQ 396
+ L +LV + ++ ++F+K P +LFYGPPG GKT A A +
Sbjct: 325 RELQELVQYP--VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 372
>BC007123-1|AAH07123.1| 939|Homo sapiens ATAD2 protein protein.
Length = 939
Score = 31.9 bits (69), Expect = 2.9
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASD-DRGIGIVRGQI-LSFASTRTI 510
LFYGPPGTGKT A A + + + + A + +G Q+ L F
Sbjct: 464 LFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQA--- 520
Query: 511 FKAGPKLIILDEADAM 558
++ P +I DE D +
Sbjct: 521 YQMRPSIIFFDEIDGL 536
>AY598335-1|AAT06746.1| 1390|Homo sapiens L16 protein.
Length = 1390
Score = 31.9 bits (69), Expect = 2.9
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASD-DRGIGIVRGQI-LSFASTRTI 510
LFYGPPGTGKT A A + + + + A + +G Q+ L F
Sbjct: 464 LFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQA--- 520
Query: 511 FKAGPKLIILDEADAM 558
++ P +I DE D +
Sbjct: 521 YQMRPSIIFFDEIDGL 536
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 253 KRLDDLVSHDDIIKTINQFMKENQLPH--LLFYGPPGTGKTSTILACAKQ 396
+ L +LV + ++ ++F+K P +LFYGPPG GKT A A +
Sbjct: 487 RELQELVQYP--VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
>AK097133-1|BAC04959.1| 978|Homo sapiens protein ( Homo sapiens
cDNA FLJ39814 fis, clone SPLEN2009970, weakly similar to
TAT-BINDING HOMOLOG 7. ).
Length = 978
Score = 31.9 bits (69), Expect = 2.9
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASD-DRGIGIVRGQI-LSFASTRTI 510
LFYGPPGTGKT A A + + + + A + +G Q+ L F
Sbjct: 464 LFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQA--- 520
Query: 511 FKAGPKLIILDEADAM 558
++ P +I DE D +
Sbjct: 521 YQMRPSIIFFDEIDGL 536
>AK094821-1|BAC04429.1| 574|Homo sapiens protein ( Homo sapiens
cDNA FLJ37502 fis, clone BRAWH2016446, moderately
similar to TAT-BINDING HOMOLOG 7. ).
Length = 574
Score = 31.9 bits (69), Expect = 2.9
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASD-DRGIGIVRGQILSFASTRTIF 513
LFYGPPGTGKT A A + + + + A + +G Q+ +
Sbjct: 438 LFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLM 497
Query: 514 KAGPKLIILDEADAM 558
+ P +I DE D +
Sbjct: 498 R--PSIIFFDEIDGL 510
>AK022348-1|BAB14017.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ12286 fis, clone MAMMA1001768, weakly similar to
CELL DIVISION CYCLE PROTEIN 48 HOMOLOG MJ1156. ).
Length = 392
Score = 31.9 bits (69), Expect = 2.9
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTP-QQFSSMVLELNASDDRGIGIVRGQILSFASTRTI 510
+L GPPG GKT + A A+ S+ L+ + + + R F R +
Sbjct: 237 VLLAGPPGVGKTQLVQAVARGAGAELLAVSAPALQGSRPGETEENVRR----VFQRAREL 292
Query: 511 FKAGPKLIILDEADAM 558
GP L+ LDE DA+
Sbjct: 293 ASRGPSLLFLDEMDAL 308
>AF313486-1|AAG29874.1| 305|Homo sapiens valosin-containing protein
protein.
Length = 305
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 253 KRLDDLVSHDDIIKTINQFMKENQLPH--LLFYGPPGTGKTSTILACAKQ 396
+ L +LV + ++ ++F+K P +LFYGPPG GKT A A +
Sbjct: 115 RELQELVQYP--VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 162
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 253 KRLDDLVSHDDIIKTINQFMKENQLPH--LLFYGPPGTGKTSTILACAKQ 396
+ L +LV + ++ ++F+K P +LFYGPPG GKT A A +
Sbjct: 487 RELQELVQYP--VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 253 KRLDDLVSHDDIIKTINQFMKENQLPH--LLFYGPPGTGKTSTILACAKQ 396
+ L +LV + ++ ++F+K P +LFYGPPG GKT A A +
Sbjct: 487 RELQELVQYP--VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
>D29677-1|BAA06147.2| 1943|Homo sapiens KIAA0054 protein.
Length = 1943
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 322 QLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 414
QLP +L GP GTGKT T+ K + Q+
Sbjct: 661 QLPPVLIIGPYGTGKTFTLAQAVKHILQQQE 691
>BC130582-1|AAI30583.1| 1942|Homo sapiens helicase with zinc finger
protein.
Length = 1942
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 322 QLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 414
QLP +L GP GTGKT T+ K + Q+
Sbjct: 660 QLPPVLIIGPYGTGKTFTLAQAVKHILQQQE 690
>BC063607-1|AAH63607.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 31.5 bits (68), Expect = 3.8
Identities = 32/113 (28%), Positives = 52/113 (46%)
Frame = +1
Query: 280 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 459
D I T N + ++L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 330 DIAIATRNTKKNRSLYRNILMYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 387
Query: 460 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 618
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 388 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 430
>BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein.
Length = 695
Score = 31.5 bits (68), Expect = 3.8
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASD--DRGIGIVRGQILSFASTRT 507
+L YGPPGTGKT A A ++ + V +N + + G ++ + T
Sbjct: 389 VLLYGPPGTGKTMIARAVANEV------GAYVSVINGPEIISKFYGETEAKLRQIFAEAT 442
Query: 508 IFKAGPKLIILDEADAMTNDAQNALRRI 591
+ P +I +DE DA+ + A +
Sbjct: 443 L--RHPSIIFIDELDALCPKREGAQNEV 468
>BC034999-1|AAH34999.2| 466|Homo sapiens katanin p60 subunit A-like
2 protein.
Length = 466
Score = 31.5 bits (68), Expect = 3.8
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTP--QQFSSMVLELNASDDRGIGIVRGQILSFASTRT 507
LL YGPPGTGKT A A + T +S ++ D + V ++ + + T
Sbjct: 218 LLLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPST 277
Query: 508 IFKAGPKLIILDEADAMTNDAQNALR 585
IF + ++ A + + +LR
Sbjct: 278 IFLDELESVMSQRGTASGGEHEGSLR 303
>BC033109-1|AAH33109.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 31.5 bits (68), Expect = 3.8
Identities = 32/113 (28%), Positives = 52/113 (46%)
Frame = +1
Query: 280 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 459
D I T N + ++L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 330 DIAIATRNTKKNRSLYRNILMYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 387
Query: 460 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 618
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 388 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 430
>BC014101-1|AAH14101.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 31.5 bits (68), Expect = 3.8
Identities = 32/113 (28%), Positives = 52/113 (46%)
Frame = +1
Query: 280 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 459
D I T N + ++L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 330 DIAIATRNTKKNRSLYRNILMYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 387
Query: 460 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 618
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 388 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 430
>BC011814-1|AAH11814.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 31.5 bits (68), Expect = 3.8
Identities = 32/113 (28%), Positives = 52/113 (46%)
Frame = +1
Query: 280 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 459
D I T N + ++L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 330 DIAIATRNTKKNRSLYRNILMYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 387
Query: 460 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 618
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 388 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 430
>BC007803-1|AAH07803.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 31.5 bits (68), Expect = 3.8
Identities = 32/113 (28%), Positives = 52/113 (46%)
Frame = +1
Query: 280 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 459
D I T N + ++L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 330 DIAIATRNTKKNRSLYRNILMYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 387
Query: 460 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 618
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 388 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 430
>AL645728-11|CAI22954.1| 634|Homo sapiens ATPase family, AAA domain
containing 3A protein.
Length = 634
Score = 31.5 bits (68), Expect = 3.8
Identities = 32/113 (28%), Positives = 52/113 (46%)
Frame = +1
Query: 280 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 459
D I T N + ++L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 378 DIAIATRNTKKNRSLYRNILMYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 435
Query: 460 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 618
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 436 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 478
>AL645728-10|CAI22955.1| 586|Homo sapiens ATPase family, AAA domain
containing 3A protein.
Length = 586
Score = 31.5 bits (68), Expect = 3.8
Identities = 32/113 (28%), Positives = 52/113 (46%)
Frame = +1
Query: 280 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 459
D I T N + ++L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 330 DIAIATRNTKKNRSLYRNILMYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 387
Query: 460 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 618
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 388 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 430
>AL645728-9|CAI22953.1| 571|Homo sapiens ATPase family, AAA domain
containing 3A protein.
Length = 571
Score = 31.5 bits (68), Expect = 3.8
Identities = 32/113 (28%), Positives = 52/113 (46%)
Frame = +1
Query: 280 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 459
D I T N + ++L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 315 DIAIATRNTKKNRSLYRNILMYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 372
Query: 460 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 618
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 373 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 415
>AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens
cDNA FLJ34065 fis, clone FCBBF3000536, highly similar to
Mus musculus spermatogenesis associated factor (SPAF)
mRNA. ).
Length = 893
Score = 31.5 bits (68), Expect = 3.8
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASD--DRGIGIVRGQILSFASTRT 507
+L YGPPGTGKT A A ++ + V +N + + G ++ + T
Sbjct: 390 VLLYGPPGTGKTMIARAVANEV------GAYVSVINGPEIISKFYGETEAKLRQIFAEAT 443
Query: 508 IFKAGPKLIILDEADAMTNDAQNALRRI 591
+ P +I +DE DA+ + A +
Sbjct: 444 L--RHPSIIFIDELDALCPKREGAQNEV 469
>AK091144-1|BAC03595.1| 634|Homo sapiens protein ( Homo sapiens
cDNA FLJ33825 fis, clone CTONG2003375, moderately
similar to Drosophila melanogaster AAA family protein
Bor (bor) mRNA. ).
Length = 634
Score = 31.5 bits (68), Expect = 3.8
Identities = 32/113 (28%), Positives = 52/113 (46%)
Frame = +1
Query: 280 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 459
D I T N + ++L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 378 DIAIATRNTKKNRSLYRNILMYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 435
Query: 460 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 618
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 436 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 478
>AK001571-1|BAA91764.1| 586|Homo sapiens protein ( Homo sapiens
cDNA FLJ10709 fis, clone NT2RP3000869. ).
Length = 586
Score = 31.5 bits (68), Expect = 3.8
Identities = 32/113 (28%), Positives = 52/113 (46%)
Frame = +1
Query: 280 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 459
D I T N + ++L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 330 DIAIATRNTKKNRSLYRNILMYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 387
Query: 460 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 618
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 388 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 430
>AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associated
factor protein protein.
Length = 790
Score = 31.5 bits (68), Expect = 3.8
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASD--DRGIGIVRGQILSFASTRT 507
+L YGPPGTGKT A A ++ + V +N + + G ++ + T
Sbjct: 390 VLLYGPPGTGKTMIARAVANEV------GAYVSVINGPEIISKFYGETEAKLRQIFAEAT 443
Query: 508 IFKAGPKLIILDEADAMTNDAQNALRRI 591
+ P +I +DE DA+ + A +
Sbjct: 444 L--RHPSIIFIDELDALCPKREGAQNEV 469
>AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associated
factor protein.
Length = 893
Score = 31.5 bits (68), Expect = 3.8
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASD--DRGIGIVRGQILSFASTRT 507
+L YGPPGTGKT A A ++ + V +N + + G ++ + T
Sbjct: 390 VLLYGPPGTGKTMIARAVANEV------GAYVSVINGPEIISKFYGETEAKLRQIFAEAT 443
Query: 508 IFKAGPKLIILDEADAMTNDAQNALRRI 591
+ P +I +DE DA+ + A +
Sbjct: 444 L--RHPSIIFIDELDALCPKREGAQNEV 469
>D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42
protein.
Length = 389
Score = 30.7 bits (66), Expect = 6.6
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQM 399
L YGPPGTGKT A A Q+
Sbjct: 171 LLYGPPGTGKTLLARAVASQL 191
>CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein.
Length = 389
Score = 30.7 bits (66), Expect = 6.6
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQM 399
L YGPPGTGKT A A Q+
Sbjct: 171 LLYGPPGTGKTLLARAVASQL 191
>BT007259-1|AAP35923.1| 665|Homo sapiens kinesin-like 4 protein.
Length = 665
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 289 IKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQ 396
++ I + + E Q +L YGP G GKT T+L +Q
Sbjct: 108 VQPILRHLLEGQNASVLAYGPTGAGKTHTMLGSPEQ 143
>BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 30.7 bits (66), Expect = 6.6
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQM 399
L YGPPGTGKT A A Q+
Sbjct: 171 LLYGPPGTGKTLLARAVASQL 191
>BC106017-1|AAI06018.1| 867|Homo sapiens SETX protein protein.
Length = 867
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQ 414
L +GPPGTGK+ TI+ ++ T Q
Sbjct: 150 LIHGPPGTGKSKTIVGLLYRLLTENQ 175
>BC078166-1|AAH78166.1| 917|Homo sapiens SETX protein protein.
Length = 917
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQ 414
L +GPPGTGK+ TI+ ++ T Q
Sbjct: 200 LIHGPPGTGKSKTIVGLLYRLLTENQ 225
>BC032622-1|AAH32622.2| 1030|Homo sapiens SETX protein protein.
Length = 1030
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQ 414
L +GPPGTGK+ TI+ ++ T Q
Sbjct: 313 LIHGPPGTGKSKTIVGLLYRLLTENQ 338
>BC032600-1|AAH32600.1| 828|Homo sapiens SETX protein protein.
Length = 828
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQ 414
L +GPPGTGK+ TI+ ++ T Q
Sbjct: 111 LIHGPPGTGKSKTIVGLLYRLLTENQ 136
>BC028155-1|AAH28155.1| 665|Homo sapiens kinesin family member 22
protein.
Length = 665
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 289 IKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQ 396
++ I + + E Q +L YGP G GKT T+L +Q
Sbjct: 108 VQPILRHLLEGQNASVLAYGPTGAGKTHTMLGSPEQ 143
>BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 30.7 bits (66), Expect = 6.6
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQM 399
L YGPPGTGKT A A Q+
Sbjct: 171 LLYGPPGTGKTLLARAVASQL 191
>BC004352-1|AAH04352.1| 665|Homo sapiens kinesin family member 22
protein.
Length = 665
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 289 IKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQ 396
++ I + + E Q +L YGP G GKT T+L +Q
Sbjct: 108 VQPILRHLLEGQNASVLAYGPTGAGKTHTMLGSPEQ 143
>AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor apraxia
protein 2 protein.
Length = 2677
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQ 414
L +GPPGTGK+ TI+ ++ T Q
Sbjct: 1960 LIHGPPGTGKSKTIVGLLYRLLTENQ 1985
>AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein.
Length = 2677
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQ 414
L +GPPGTGK+ TI+ ++ T Q
Sbjct: 1960 LIHGPPGTGKSKTIVGLLYRLLTENQ 1985
>AL159997-5|CAI40857.1| 948|Homo sapiens senataxin protein.
Length = 948
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQ 414
L +GPPGTGK+ TI+ ++ T Q
Sbjct: 202 LIHGPPGTGKSKTIVGLLYRLLTENQ 227
>AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein.
Length = 2677
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQ 414
L +GPPGTGK+ TI+ ++ T Q
Sbjct: 1960 LIHGPPGTGKSKTIVGLLYRLLTENQ 1985
>AK223431-1|BAD97151.1| 665|Homo sapiens kinesin family member 22
variant protein.
Length = 665
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 289 IKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQ 396
++ I + + E Q +L YGP G GKT T+L +Q
Sbjct: 108 VQPILRHLLEGQNASVLAYGPTGAGKTHTMLGSPEQ 143
>AK001456-1|BAA91701.1| 828|Homo sapiens protein ( Homo sapiens
cDNA FLJ10594 fis, clone NT2RP2004689. ).
Length = 828
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQ 414
L +GPPGTGK+ TI+ ++ T Q
Sbjct: 111 LIHGPPGTGKSKTIVGLLYRLLTENQ 136
>AF343078-1|AAK38647.1| 578|Homo sapiens TOB3 protein.
Length = 578
Score = 30.7 bits (66), Expect = 6.6
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +1
Query: 280 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMV-LELNASDDR 456
D I T+N + ++L YGPPG GK T+ A +++ ++ M ++ +
Sbjct: 329 DIAIATLNTKKNRSLFRNILMYGPPGPGK--TLFAKKLPLHSGMDYAIMTGGDVAPMGGK 386
Query: 457 GIGIVRGQILSFASTRTIFKAGPKLIILDEADA 555
G+ + ++ +A+T + G L+ +DEADA
Sbjct: 387 GVTAMH-KLFDWANTS---RRG-LLLFMDEADA 414
>AF136523-1|AAD28285.1| 1321|Homo sapiens bile salt export pump
protein.
Length = 1321
Score = 30.7 bits (66), Expect = 6.6
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +1
Query: 376 ILACAKQMYTPQQFSSMVLELNAS-DDRGIGIVRGQILSFASTRTIFKAGPKLIILDEA- 549
++A AKQ S+ + + +G + RG+ A R I + PK+++LDEA
Sbjct: 1188 VIAAAKQAQLHDFVMSLPEKYETNVGSQGSQLSRGEKQRIAIARAIVR-DPKILLLDEAT 1246
Query: 550 DAMTNDAQNALRRIIEKYTENVRFCII 630
A+ +++ ++ ++K E R CI+
Sbjct: 1247 SALDTESEKTVQVALDKAREG-RTCIV 1272
>AF091582-1|AAC77455.1| 1321|Homo sapiens bile salt export pump
protein.
Length = 1321
Score = 30.7 bits (66), Expect = 6.6
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +1
Query: 376 ILACAKQMYTPQQFSSMVLELNAS-DDRGIGIVRGQILSFASTRTIFKAGPKLIILDEA- 549
++A AKQ S+ + + +G + RG+ A R I + PK+++LDEA
Sbjct: 1188 VIAAAKQAQLHDFVMSLPEKYETNVGSQGSQLSRGEKQRIAIARAIVR-DPKILLLDEAT 1246
Query: 550 DAMTNDAQNALRRIIEKYTENVRFCII 630
A+ +++ ++ ++K E R CI+
Sbjct: 1247 SALDTESEKTVQVALDKAREG-RTCIV 1272
>AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulatory
subunit protein.
Length = 389
Score = 30.7 bits (66), Expect = 6.6
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQM 399
L YGPPGTGKT A A Q+
Sbjct: 171 LLYGPPGTGKTLLARAVASQL 191
>AC069137-4|AAY24100.1| 451|Homo sapiens unknown protein.
Length = 451
Score = 30.7 bits (66), Expect = 6.6
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +1
Query: 376 ILACAKQMYTPQQFSSMVLELNAS-DDRGIGIVRGQILSFASTRTIFKAGPKLIILDEA- 549
++A AKQ S+ + + +G + RG+ A R I + PK+++LDEA
Sbjct: 318 VIAAAKQAQLHDFVMSLPEKYETNVGSQGSQLSRGEKQRIAIARAIVR-DPKILLLDEAT 376
Query: 550 DAMTNDAQNALRRIIEKYTENVRFCII 630
A+ +++ ++ ++K E R CI+
Sbjct: 377 SALDTESEKTVQVALDKAREG-RTCIV 402
>AC002301-2|AAC08709.1| 198|Homo sapiens Similar to kinesin-like
DNA binding protein (KID) protein.
Length = 198
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 289 IKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQ 396
++ I + + E Q +L YGP G GKT T+L +Q
Sbjct: 108 VQPILRHLLEGQNASVLAYGPTGAGKTHTMLGSPEQ 143
>AB017430-1|BAA33019.2| 665|Homo sapiens kinesin-like DNA binding
protein protein.
Length = 665
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 289 IKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQ 396
++ I + + E Q +L YGP G GKT T+L +Q
Sbjct: 108 VQPILRHLLEGQNASVLAYGPTGAGKTHTMLGSPEQ 143
>AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein.
Length = 2663
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQ 414
L +GPPGTGK+ TI+ ++ T Q
Sbjct: 1946 LIHGPPGTGKSKTIVGLLYRLLTENQ 1971
>U96131-1|AAB64095.1| 432|Homo sapiens HPV16 E1 protein binding
protein protein.
Length = 432
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQM 399
+L +GPPGTGKTS A A+++
Sbjct: 175 VLLHGPPGTGKTSLCKALAQKL 196
>L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulatory
subunit protein.
Length = 440
Score = 30.3 bits (65), Expect = 8.7
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
++ YGPPGTGKT A A Q S+ L + S+ + G L R
Sbjct: 222 VILYGPPGTGKTLLAKAVANQT------SATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 514 KAGPKLIILDEADAM 558
+ P ++ +DE DA+
Sbjct: 276 EHAPSIVFIDEIDAI 290
>CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein.
Length = 440
Score = 30.3 bits (65), Expect = 8.7
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
++ YGPPGTGKT A A Q S+ L + S+ + G L R
Sbjct: 222 VILYGPPGTGKTLLAKAVANQT------SATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 514 KAGPKLIILDEADAM 558
+ P ++ +DE DA+
Sbjct: 276 EHAPSIVFIDEIDAI 290
>CR456744-1|CAG33025.1| 432|Homo sapiens TRIP13 protein.
Length = 432
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQM 399
+L +GPPGTGKTS A A+++
Sbjct: 175 VLLHGPPGTGKTSLCKALAQKL 196
>BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 30.3 bits (65), Expect = 8.7
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
++ YGPPGTGKT A A Q S+ L + S+ + G L R
Sbjct: 222 VILYGPPGTGKTLLAKAVANQT------SATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 514 KAGPKLIILDEADAM 558
+ P ++ +DE DA+
Sbjct: 276 EHAPSIVFIDEIDAI 290
>BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 30.3 bits (65), Expect = 8.7
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
++ YGPPGTGKT A A Q S+ L + S+ + G L R
Sbjct: 222 VILYGPPGTGKTLLAKAVANQT------SATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 514 KAGPKLIILDEADAM 558
+ P ++ +DE DA+
Sbjct: 276 EHAPSIVFIDEIDAI 290
>BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 30.3 bits (65), Expect = 8.7
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
++ YGPPGTGKT A A Q S+ L + S+ + G L R
Sbjct: 222 VILYGPPGTGKTLLAKAVANQT------SATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 514 KAGPKLIILDEADAM 558
+ P ++ +DE DA+
Sbjct: 276 EHAPSIVFIDEIDAI 290
>BC024032-1|AAH24032.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
+L GPPGTGKT A A + P ++S + D+ +G+ +I + R
Sbjct: 318 ILLVGPPGTGKTLLARAVAGEADVPFYYASG----SEFDEMFVGVGASRIRNL--FREAK 371
Query: 514 KAGPKLIILDEADAM 558
P +I +DE D++
Sbjct: 372 ANAPCVIFIDELDSV 386
>BC023507-1|AAH23507.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
+L GPPGTGKT A A + P ++S + D+ +G+ +I + R
Sbjct: 318 ILLVGPPGTGKTLLARAVAGEADVPFYYASG----SEFDEMFVGVGASRIRNL--FREAK 371
Query: 514 KAGPKLIILDEADAM 558
P +I +DE D++
Sbjct: 372 ANAPCVIFIDELDSV 386
>BC019294-1|AAH19294.1| 432|Homo sapiens thyroid hormone receptor
interactor 13 protein.
Length = 432
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQM 399
+L +GPPGTGKTS A A+++
Sbjct: 175 VLLHGPPGTGKTSLCKALAQKL 196
>BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 30.3 bits (65), Expect = 8.7
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
++ YGPPGTGKT A A Q S+ L + S+ + G L R
Sbjct: 222 VILYGPPGTGKTLLAKAVANQT------SATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 514 KAGPKLIILDEADAM 558
+ P ++ +DE DA+
Sbjct: 276 EHAPSIVFIDEIDAI 290
>BC007795-1|AAH07795.1| 740|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 740
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
+L GPPGTGKT A A + P ++S + D+ +G+ +I + R
Sbjct: 375 ILLVGPPGTGKTLLARAVAGEADVPFYYASG----SEFDEMFVGVGASRIRNL--FREAK 428
Query: 514 KAGPKLIILDEADAM 558
P +I +DE D++
Sbjct: 429 ANAPCVIFIDELDSV 443
>BC007500-1|AAH07500.1| 419|Homo sapiens BCS1-like (yeast) protein.
Length = 419
Score = 30.3 bits (65), Expect = 8.7
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDR 456
L YGPPG GK+S I A A ++ S+ + + SDDR
Sbjct: 227 LLYGPPGCGKSSFITALAGELEHSICLLSLT-DSSLSDDR 265
>BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 30.3 bits (65), Expect = 8.7
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
++ YGPPGTGKT A A Q S+ L + S+ + G L R
Sbjct: 222 VILYGPPGTGKTLLAKAVANQT------SATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 514 KAGPKLIILDEADAM 558
+ P ++ +DE DA+
Sbjct: 276 EHAPSIVFIDEIDAI 290
>BC000416-1|AAH00416.1| 419|Homo sapiens BCS1-like (yeast) protein.
Length = 419
Score = 30.3 bits (65), Expect = 8.7
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDR 456
L YGPPG GK+S I A A ++ S+ + + SDDR
Sbjct: 227 LLYGPPGCGKSSFITALAGELEHSICLLSLT-DSSLSDDR 265
>BC000404-1|AAH00404.1| 432|Homo sapiens thyroid hormone receptor
interactor 13 protein.
Length = 432
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQM 399
+L +GPPGTGKTS A A+++
Sbjct: 175 VLLHGPPGTGKTSLCKALAQKL 196
>AY358484-1|AAQ88848.1| 716|Homo sapiens YME1L1 protein.
Length = 716
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
+L GPPGTGKT A A + P ++S + D+ +G+ +I + R
Sbjct: 318 ILLVGPPGTGKTLLARAVAGEADVPFYYASG----SEFDEMFVGVGASRIRNL--FREAK 371
Query: 514 KAGPKLIILDEADAM 558
P +I +DE D++
Sbjct: 372 ANAPCVIFIDELDSV 386
>AL162272-2|CAI12217.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
+L GPPGTGKT A A + P ++S + D+ +G+ +I + R
Sbjct: 318 ILLVGPPGTGKTLLARAVAGEADVPFYYASG----SEFDEMFVGVGASRIRNL--FREAK 371
Query: 514 KAGPKLIILDEADAM 558
P +I +DE D++
Sbjct: 372 ANAPCVIFIDELDSV 386
>AL162272-1|CAC19650.2| 773|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 773
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
+L GPPGTGKT A A + P ++S + D+ +G+ +I + R
Sbjct: 375 ILLVGPPGTGKTLLARAVAGEADVPFYYASG----SEFDEMFVGVGASRIRNL--FREAK 428
Query: 514 KAGPKLIILDEADAM 558
P +I +DE D++
Sbjct: 429 ANAPCVIFIDELDSV 443
>AL160291-4|CAI16906.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
+L GPPGTGKT A A + P ++S + D+ +G+ +I + R
Sbjct: 318 ILLVGPPGTGKTLLARAVAGEADVPFYYASG----SEFDEMFVGVGASRIRNL--FREAK 371
Query: 514 KAGPKLIILDEADAM 558
P +I +DE D++
Sbjct: 372 ANAPCVIFIDELDSV 386
>AL160291-3|CAI16907.1| 773|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 773
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
+L GPPGTGKT A A + P ++S + D+ +G+ +I + R
Sbjct: 375 ILLVGPPGTGKTLLARAVAGEADVPFYYASG----SEFDEMFVGVGASRIRNL--FREAK 428
Query: 514 KAGPKLIILDEADAM 558
P +I +DE D++
Sbjct: 429 ANAPCVIFIDELDSV 443
>AK223518-1|BAD97238.1| 419|Homo sapiens BCS1-like variant protein.
Length = 419
Score = 30.3 bits (65), Expect = 8.7
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDR 456
L YGPPG GK+S I A A ++ S+ + + SDDR
Sbjct: 227 LLYGPPGCGKSSFITALAGELEHSICLLSLT-DSSLSDDR 265
>AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase
subunit 1 variant protein.
Length = 440
Score = 30.3 bits (65), Expect = 8.7
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
++ YGPPGTGKT A A Q S+ L + S+ + G L R
Sbjct: 222 VILYGPPGTGKTLLAKAVANQT------SATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 514 KAGPKLIILDEADAM 558
+ P ++ +DE DA+
Sbjct: 276 EHAPSIVFIDEIDAI 290
>AJ132637-1|CAB51858.1| 716|Homo sapiens ATP-dependent
metalloprotease YME1L protein.
Length = 716
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
+L GPPGTGKT A A + P ++S + D+ +G+ +I + R
Sbjct: 318 ILLVGPPGTGKTLLARAVAGEADVPFYYASG----SEFDEMFVGVGASRIRNL--FREAK 371
Query: 514 KAGPKLIILDEADAM 558
P +I +DE D++
Sbjct: 372 ANAPCVIFIDELDSV 386
>AF516670-1|AAN05490.1| 419|Homo sapiens BCS1-like protein protein.
Length = 419
Score = 30.3 bits (65), Expect = 8.7
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDR 456
L YGPPG GK+S I A A ++ S+ + + SDDR
Sbjct: 227 LLYGPPGCGKSSFITALAGELEHSICLLSLT-DSSLSDDR 265
>AF346835-1|AAK29417.1| 419|Homo sapiens BCS1 protein.
Length = 419
Score = 30.3 bits (65), Expect = 8.7
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDR 456
L YGPPG GK+S I A A ++ S+ + + SDDR
Sbjct: 227 LLYGPPGCGKSSFITALAGELEHSICLLSLT-DSSLSDDR 265
>AF151782-1|AAK57555.1| 773|Homo sapiens ATP-dependent
metalloprotease FtsH1 homolog protein.
Length = 773
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
+L GPPGTGKT A A + P ++S + D+ +G+ +I + R
Sbjct: 375 ILLVGPPGTGKTLLARAVAGEADVPFYYASG----SEFDEMFVGVGASRIRNL--FREAK 428
Query: 514 KAGPKLIILDEADAM 558
P +I +DE D++
Sbjct: 429 ANAPCVIFIDELDSV 443
>AF038195-1|AAB97365.1| 419|Homo sapiens unknown protein.
Length = 419
Score = 30.3 bits (65), Expect = 8.7
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDR 456
L YGPPG GK+S I A A ++ S+ + + SDDR
Sbjct: 227 LLYGPPGCGKSSFITALAGELEHSICLLSLT-DSSLSDDR 265
>AF026849-1|AAD08638.1| 419|Homo sapiens h-bcs1 protein.
Length = 419
Score = 30.3 bits (65), Expect = 8.7
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDR 456
L YGPPG GK+S I A A ++ S+ + + SDDR
Sbjct: 227 LLYGPPGCGKSSFITALAGELEHSICLLSLT-DSSLSDDR 265
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,483,783
Number of Sequences: 237096
Number of extensions: 2192424
Number of successful extensions: 5059
Number of sequences better than 10.0: 214
Number of HSP's better than 10.0 without gapping: 4508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5039
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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