Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_F01
(817 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical p... 267 7e-72
U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna replic... 184 7e-47
AF036699-3|AAB88360.1| 334|Caenorhabditis elegans Rfc (dna repl... 169 2e-42
Z70307-13|CAA94339.1| 354|Caenorhabditis elegans Hypothetical p... 79 3e-15
Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 35 0.061
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 35 0.061
Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 34 0.11
AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal t... 34 0.11
AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal t... 34 0.11
AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein ... 34 0.11
AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical ... 34 0.14
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 33 0.32
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 33 0.32
Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 32 0.56
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 32 0.56
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 31 1.3
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 31 1.3
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 31 1.3
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 31 1.3
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 31 1.3
Z81521-2|CAB04224.1| 514|Caenorhabditis elegans Hypothetical pr... 30 1.7
AF076840-1|AAC95522.1| 514|Caenorhabditis elegans Rad17-like pr... 30 1.7
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 30 2.3
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 30 2.3
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 29 3.0
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 29 3.0
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 29 3.0
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 29 3.0
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 29 3.0
Z70680-8|CAA94570.2| 349|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical pr... 29 4.0
AL031633-9|CAA21023.1| 636|Caenorhabditis elegans Hypothetical ... 29 4.0
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 29 4.0
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 29 4.0
Z99281-28|CAB16503.1| 633|Caenorhabditis elegans Hypothetical p... 29 5.3
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z77666-2|CAB01233.2| 80|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z54271-8|CAA91038.1| 185|Caenorhabditis elegans Hypothetical pr... 29 5.3
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 29 5.3
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 29 5.3
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 29 5.3
U29613-3|AAC47062.2| 483|Caenorhabditis elegans Hypothetical pr... 28 7.0
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 28 7.0
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 28 7.0
Z81058-7|CAB02920.1| 1011|Caenorhabditis elegans Hypothetical pr... 28 9.2
U29244-14|AAC71095.1| 774|Caenorhabditis elegans Fzo (fzo mitoc... 28 9.2
AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical ... 28 9.2
AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb (recombi... 28 9.2
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 28 9.2
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 28 9.2
>L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical
protein F44B9.8 protein.
Length = 368
Score = 267 bits (654), Expect = 7e-72
Identities = 133/213 (62%), Positives = 161/213 (75%), Gaps = 9/213 (4%)
Frame = +1
Query: 205 TTIKTLFLRRVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILA 384
TT L VEKYRP +LD+LV+H+ I+KT+ +F++ LPHLLFYGPPGTGKT+T+LA
Sbjct: 22 TTTTASNLPWVEKYRPSKLDELVAHEQIVKTLTKFIENRTLPHLLFYGPPGTGKTTTVLA 81
Query: 385 CAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTR------TIFKAGP---KLII 537
A+QMY+P + +SMVLELNASD+RGI +VR I++FA T+ T G KL+I
Sbjct: 82 AARQMYSPTKMASMVLELNASDERGIDVVRNTIVNFAQTKGLQAFSTSSNTGTVPFKLVI 141
Query: 538 LDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIV 717
LDEADAMT DAQNALRR+IEKYT+NVRFCIICNYL I+PA+QSRCTRFRFAPL Q IV
Sbjct: 142 LDEADAMTKDAQNALRRVIEKYTDNVRFCIICNYLASIVPAIQSRCTRFRFAPLDQKLIV 201
Query: 718 PRLQEIVTTEGVKMSEGGMKALLTWSGGDMXKV 816
PRL+ IV TE +KM+ G ALL S GDM V
Sbjct: 202 PRLEYIVETEQLKMTPDGKDALLIVSKGDMRTV 234
>U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 4 protein.
Length = 334
Score = 184 bits (448), Expect = 7e-47
Identities = 90/199 (45%), Positives = 129/199 (64%), Gaps = 7/199 (3%)
Frame = +1
Query: 238 EKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQF 417
EKYRPK LDD+ D+++ + ++ LPHLLFYGPPGTGKTS LA +Q++ F
Sbjct: 19 EKYRPKTLDDIAYQDEVVTMLKGALQGRDLPHLLFYGPPGTGKTSAALAFCRQLFPKNIF 78
Query: 418 SSMVLELNASDDRGIGIVRGQILSFAST-------RTIFKAGPKLIILDEADAMTNDAQN 576
VL+LNASD+RGI +VR +I SF+ + + K K+IILDE DAMT +AQ
Sbjct: 79 HDRVLDLNASDERGIAVVRQKIQSFSKSSLGHSHREDVLKL--KIIILDEVDAMTREAQA 136
Query: 577 ALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVK 756
A+RR+IE +++ RF +ICNY+ ++IP + SRC +FRF L + V RL+ I EG
Sbjct: 137 AMRRVIEDFSKTTRFILICNYVSRLIPPVVSRCAKFRFKSLPAEIQVQRLRTICDAEGTP 196
Query: 757 MSEGGMKALLTWSGGDMXK 813
MS+ +K ++ +S GD+ +
Sbjct: 197 MSDDELKQVMEYSEGDLRR 215
>AF036699-3|AAB88360.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 2 protein.
Length = 334
Score = 169 bits (411), Expect = 2e-42
Identities = 84/192 (43%), Positives = 125/192 (65%), Gaps = 1/192 (0%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 414
VEKYRPK L D+V +++I++ + E +P+++ GPPG GKT+++ A A+++ +
Sbjct: 13 VEKYRPKVLADIVGNENIVERLKVIGHEGNVPNIVLSGPPGCGKTTSVWALARELLG-DK 71
Query: 415 FSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGP-KLIILDEADAMTNDAQNALRRI 591
VLELNASD+RGI +VR +I +FA T+ G K+IILDEAD+MT+ AQ ALRR
Sbjct: 72 VKEAVLELNASDERGIDVVRHRIKTFAQTKVTLPEGRHKIIILDEADSMTDGAQQALRRT 131
Query: 592 IEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGG 771
+E YT+ RF + CN KII +QSRC R+ L Q++ R++E+ E V +GG
Sbjct: 132 MEMYTKTTRFALACNQSEKIIEPIQSRCALLRYTKLSPVQLLTRVKEVAKAEKVNYDDGG 191
Query: 772 MKALLTWSGGDM 807
++A+L + GDM
Sbjct: 192 LEAILFTAQGDM 203
>Z70307-13|CAA94339.1| 354|Caenorhabditis elegans Hypothetical
protein C39E9.13 protein.
Length = 354
Score = 79.4 bits (187), Expect = 3e-15
Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 30/223 (13%)
Frame = +1
Query: 235 VEKYRPKRLDDLVSHDDIIKTIN--QFMKENQLPHLLFYGPPGTGKTSTILACAKQMY-- 402
V+KYRPK L D I+ N +F+ + +PHLLF GP G GK + I +++Y
Sbjct: 5 VDKYRPKDLLGKDGVDYHIEQANHLKFLSADCMPHLLFCGPSGAGKKTRIKCLLRELYGV 64
Query: 403 -------TPQQFSS---MVLELNA----------SDDRGIG---IVRGQILSFASTRTIF 513
+ F+S LE+ D GI +V+ + A T I
Sbjct: 65 GVEKTQLIMKSFTSPSNKKLEIQTVSSNYHIEMTPSDVGIYDRVVVQDLVKEMAQTSQIE 124
Query: 514 KAGP---KLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRF 684
K+++L EAD++T DAQ+ LRR +EKY N + + C L +II LQSRC
Sbjct: 125 STSQRSFKVVVLCEADSLTRDAQHGLRRTMEKYANNCKIVLSCESLSRIIEPLQSRCIII 184
Query: 685 RFAPLKQDQIVPRLQEIVTTEGVKMSEGGMKALLTWSGGDMXK 813
+ + L++++ E + E ++ ++ S G++ +
Sbjct: 185 NVPAPTDEDVTKVLRKVIERESFLLPENVLQKIVEKSEGNLRR 227
>Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical
protein C54G10.2 protein.
Length = 839
Score = 41.1 bits (92), Expect = 0.001
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 17/174 (9%)
Frame = +1
Query: 337 LFYGPPGTGKTS-TILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTI- 510
L G PG GKT+ +AC QQ ++E+NASD R + +I + + I
Sbjct: 344 LLSGSPGVGKTTCAYMAC-------QQLGLQLVEMNASDVRSKKHLEAKIGELSGSHQIE 396
Query: 511 -----FKAGPK-------LIILDEADAMT-NDAQNALRRIIEKYTEN-VRFCIICN-YLG 645
K P+ ++I+DE D M+ N+ + + +I+ E+ + ICN
Sbjct: 397 QFFGAKKCAPQDNQKVHHILIMDEVDGMSGNEDRAGISELIQIIKESKIPIICICNDRQH 456
Query: 646 KIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGMKALLTWSGGDM 807
I L + C RF + + I R+ I + E +K+ + + ++ SG D+
Sbjct: 457 PKIRTLANYCYDLRFPKPRVETIRSRMMTICSQEKMKIGKEELDEIIELSGHDV 510
>Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical
protein K08F4.1 protein.
Length = 850
Score = 39.1 bits (87), Expect = 0.004
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 6/164 (3%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
LL GP G GK++ A+Q +++NASD R + + + T
Sbjct: 333 LLLSGPAGLGKSTLARIVARQA------GYSTIDVNASDARTVADLNKVLEGAVKTSRTL 386
Query: 514 KAG--PKLIILDEADAMTNDAQNALRRIIEKYTEN-VRFCI--ICNYL-GKIIPALQSRC 675
A P +ILDE D D L R I+ + +R I ICN L + L+
Sbjct: 387 DADQRPACLILDEIDGTPIDTIRHLVRCIQATGKKAIRRPIIGICNNLYTPALRDLRGVA 446
Query: 676 TRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGMKALLTWSGGDM 807
+ KQD + RL+EI E ++ ++ L DM
Sbjct: 447 WCVQLVATKQDVLAKRLEEICDRERLRCDLSTLRKLCELCANDM 490
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 35.1 bits (77), Expect = 0.061
Identities = 27/81 (33%), Positives = 40/81 (49%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
+L YGPPG GK T+LA A +F + L+++ D+ G Q L+ A
Sbjct: 117 ILLYGPPGCGK--TLLAKAVARAAGCRFIN--LQVSNLTDKWYG--ESQKLAAAVFSVAQ 170
Query: 514 KAGPKLIILDEADAMTNDAQN 576
K P +I +DE D+ D Q+
Sbjct: 171 KFQPTIIFIDEIDSFLRDRQS 191
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 35.1 bits (77), Expect = 0.061
Identities = 27/81 (33%), Positives = 40/81 (49%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
+L YGPPG GK T+LA A +F + L+++ D+ G Q L+ A
Sbjct: 120 ILLYGPPGCGK--TLLAKAVARAAGCRFIN--LQVSNLTDKWYG--ESQKLAAAVFSVAQ 173
Query: 514 KAGPKLIILDEADAMTNDAQN 576
K P +I +DE D+ D Q+
Sbjct: 174 KFQPTIIFIDEIDSFLRDRQS 194
>Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical
protein W09D6.6 protein.
Length = 801
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 451 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 627
+RG+ + G+ A RTI K P+ I LDEA A+ + A+++ +EK ++ +
Sbjct: 682 ERGLKLSGGEKQRVAIARTILKK-PQFIFLDEATSALDTPTERAIQKCLEKLCKSRTGVV 740
Query: 628 ICNYLGKIIPA 660
+ + L ++ A
Sbjct: 741 VAHRLSTVVNA 751
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical
protein T21E8.1b protein.
Length = 1204
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 451 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 627
+RG + GQ A RT+ + PK+++LDEA A+ N+++ +++ +E ++ +
Sbjct: 456 ERGTQLSGGQKQRIAIARTLVR-NPKILLLDEATSALDNESEQVVQKALENASQGRTTIV 514
Query: 628 ICNYLGKI 651
+ + L I
Sbjct: 515 VAHRLSTI 522
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.1a protein.
Length = 1263
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 451 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 627
+RG + GQ A RT+ + PK+++LDEA A+ N+++ +++ +E ++ +
Sbjct: 515 ERGTQLSGGQKQRIAIARTLVR-NPKILLLDEATSALDNESEQVVQKALENASQGRTTIV 573
Query: 628 ICNYLGKI 651
+ + L I
Sbjct: 574 VAHRLSTI 581
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.2 protein.
Length = 1263
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 451 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 627
+RG + GQ A RT+ + PK+++LDEA A+ N+++ +++ +E ++ +
Sbjct: 515 ERGTQLSGGQKQRIAIARTLVR-NPKILLLDEATSALDNESEQVVQKALENASQGRTTIV 573
Query: 628 ICNYLGKI 651
+ + L I
Sbjct: 574 VAHRLSTI 581
>AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 451 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 627
+RG+ + G+ A RTI K P+ I LDEA A+ + A+++ +EK ++ +
Sbjct: 682 ERGLKLSGGEKQRVAIARTILKK-PQFIFLDEATSALDTPTERAIQKCLEKLCKSRTGVV 740
Query: 628 ICNYLGKIIPA 660
+ + L ++ A
Sbjct: 741 VAHRLSTVVNA 751
>AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 451 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 627
+RG+ + G+ A RTI K P+ I LDEA A+ + A+++ +EK ++ +
Sbjct: 682 ERGLKLSGGEKQRVAIARTILKK-PQFIFLDEATSALDTPTERAIQKCLEKLCKSRTGVV 740
Query: 628 ICNYLGKIIPA 660
+ + L ++ A
Sbjct: 741 VAHRLSTVVNA 751
>AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein
protein.
Length = 801
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 451 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 627
+RG+ + G+ A RTI K P+ I LDEA A+ + A+++ +EK ++ +
Sbjct: 682 ERGLKLSGGEKQRVAIARTILKK-PQFIFLDEATSALDTPTERAIQKCLEKLCKSRTGVV 740
Query: 628 ICNYLGKIIPA 660
+ + L ++ A
Sbjct: 741 VAHRLSTVVNA 751
>AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical
protein Y75B8A.4 protein.
Length = 773
Score = 33.9 bits (74), Expect = 0.14
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG-----IGIVRGQILSFAS 498
L F GPPG GKTS A A+ M Q S+ + SD RG + + G+I+
Sbjct: 332 LCFTGPPGIGKTSIAKAIAESMGRKFQRVSLGGIRDESDIRGHRRTYVAAMPGRIIEALK 391
Query: 499 TRTIFKAGPKLIILDEADAMTNDAQNA 579
T K + +LDE D + + Q +
Sbjct: 392 T---CKTNNPVFLLDEVDKLYSGNQGS 415
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACA 390
LFYGPPGTGK+S I A A
Sbjct: 201 LFYGPPGTGKSSFISALA 218
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACA 390
LFYGPPGTGK+S I A A
Sbjct: 247 LFYGPPGTGKSSFISALA 264
>Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 31.9 bits (69), Expect = 0.56
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +1
Query: 283 DIIKTINQFMKENQL-PHLLFYGPPGTGKT 369
DI T + + N L +++FYGPPGTGKT
Sbjct: 327 DIAITTSNTKRNNGLFRNVMFYGPPGTGKT 356
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 31.9 bits (69), Expect = 0.56
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTP--QQFSSMVLELNASDDRGIGIVRGQILSFASTRT 507
+L YGPPGTGKT A A Q + + ++++ D G +VR +FA +
Sbjct: 214 VLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGD--GAKLVRD---AFALAK- 267
Query: 508 IFKAGPKLIILDEADAM 558
+ P +I +DE DA+
Sbjct: 268 --EKAPAIIFIDELDAI 282
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQ 396
++FYGPPGTGKT A A +
Sbjct: 428 VVFYGPPGTGKTLVARALANE 448
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQ 396
++FYGPPGTGKT A A +
Sbjct: 426 VVFYGPPGTGKTLVARALANE 446
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQ 396
++FYGPPGTGKT A A +
Sbjct: 428 VVFYGPPGTGKTLVARALANE 448
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQ 396
++FYGPPGTGKT A A +
Sbjct: 428 VVFYGPPGTGKTLVARALANE 448
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQ 396
++FYGPPGTGKT A A +
Sbjct: 426 VVFYGPPGTGKTLVARALANE 446
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQ 396
++FYGPPGTGKT A A +
Sbjct: 428 VVFYGPPGTGKTLVARALANE 448
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQ 396
++FYGPPGTGKT A A +
Sbjct: 428 VVFYGPPGTGKTLVARALANE 448
>Z81521-2|CAB04224.1| 514|Caenorhabditis elegans Hypothetical
protein F32A11.2 protein.
Length = 514
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Frame = +1
Query: 250 PKRLDDLVSHDDIIKTINQFMKE------NQLPHLLFYGPPGTGKTSTI-LACAKQ 396
P+R D+L H+ I ++ ++K QL + GP G+GK++T+ + C +Q
Sbjct: 15 PRRRDELQIHNKKIAEVDHWLKNVFSESNKQLGVMYLTGPAGSGKSTTVEVMCTEQ 70
>AF076840-1|AAC95522.1| 514|Caenorhabditis elegans Rad17-like
protein protein.
Length = 514
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Frame = +1
Query: 250 PKRLDDLVSHDDIIKTINQFMKE------NQLPHLLFYGPPGTGKTSTI-LACAKQ 396
P+R D+L H+ I ++ ++K QL + GP G+GK++T+ + C +Q
Sbjct: 15 PRRRDELQIHNKKIAEVDHWLKNVFSESNKQLGVMYLTGPAGSGKSTTVEVMCTEQ 70
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 253 KRLDDLVSHDDIIKTINQFMKENQLPH--LLFYGPPGTGKTSTILACAKQ 396
+ L +LV + ++ +++K P +LFYGPPG GKT A A +
Sbjct: 493 RELQELVQYP--VEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 540
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQ 396
+L +GPPGTGKT A A +
Sbjct: 247 ILLFGPPGTGKTLIARAVANE 267
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 253 KRLDDLVSHDDIIKTINQFMKENQLPH--LLFYGPPGTGKTSTILACAKQ 396
+ L +LV + ++ +++K P +LFYGPPG GKT A A +
Sbjct: 492 RELQELVQYP--VEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 539
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQ 396
+L +GPPGTGKT A A +
Sbjct: 246 ILLFGPPGTGKTLIARAVANE 266
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 253 KRLDDLVSHDDIIKTINQFMKENQLPH--LLFYGPPGTGKTSTILACAKQ 396
+ L +LV + ++ +++K P +LFYGPPG GKT A A +
Sbjct: 492 RELQELVQYP--VEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 539
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQ 396
+L +GPPGTGKT A A +
Sbjct: 246 ILLFGPPGTGKTLIARAVANE 266
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQ---ILSFASTR 504
+L G PG GK+ST++A A+ P + LN SD + + G +L+ T
Sbjct: 1352 ILLEGAPGCGKSSTVMALAQLTGNP------ITRLNLSDQTDLSDLFGSDVPVLTEDGTM 1405
Query: 505 TI-FKAGPKLIILDEADAMTNDAQN-ALRRIIE 597
T ++ GP L + + + + D N A + ++E
Sbjct: 1406 TFRWEDGPVLKAIKKGEWILLDEMNLASQSVLE 1438
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical
protein C05A9.1 protein.
Length = 1283
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 451 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 627
+RG + GQ A RT+ + P++++LDEA A+ N+++ ++ ++K + +
Sbjct: 539 ERGAQLSGGQKQRIAIARTLVR-NPRILLLDEATSALDNESEFIVQEALQKASIGRTTIV 597
Query: 628 ICNYLGKI 651
+ + L I
Sbjct: 598 VAHRLSTI 605
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 29.5 bits (63), Expect = 3.0
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACA---KQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTR 504
+L +GPPG GKT A A KQM+ SS+ + ++ +RG F R
Sbjct: 214 ILLFGPPGNGKTLLAKAVAGESKQMFFNISASSLTSKWVGDSEK---TIRG---LFQIAR 267
Query: 505 TIFKAGPKLIILDEADAM 558
A P +I +DE D++
Sbjct: 268 ---NAQPSIIFIDEIDSI 282
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 29.5 bits (63), Expect = 3.0
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
+L YGPPG GK T+LA A T F +V S+ + G + R
Sbjct: 198 VLMYGPPGCGK--TMLAKAVAANTAASFIRVV----GSEFVQKYLGEGPRMVRDVFRLAK 251
Query: 514 KAGPKLIILDEADAMTN---DAQNALRRIIEK 600
+ P +I +DE DA+ DAQ R +++
Sbjct: 252 ENSPSIIFIDEIDAIATKRFDAQTGADREVQR 283
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 29.5 bits (63), Expect = 3.0
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +1
Query: 283 DIIKTINQFMKEN-QLPH-LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDR 456
D +K +F K +LP L GPPG GKT A A + P F SM
Sbjct: 302 DYLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAESTVP--FISMNGSEFVEVIG 359
Query: 457 GIGIVRGQILSFASTRTIFKAGPKLIILDEADAM 558
G+G R + L F R+ P +I +DE DA+
Sbjct: 360 GLGASRIRGL-FKEARS---RAPCIIYIDEIDAI 389
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 29.5 bits (63), Expect = 3.0
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +1
Query: 283 DIIKTINQFMKEN-QLPH-LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDR 456
D +K +F K +LP L GPPG GKT A A + P F SM
Sbjct: 302 DYLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAESTVP--FISMNGSEFVEVIG 359
Query: 457 GIGIVRGQILSFASTRTIFKAGPKLIILDEADAM 558
G+G R + L F R+ P +I +DE DA+
Sbjct: 360 GLGASRIRGL-FKEARS---RAPCIIYIDEIDAI 389
>Z70680-8|CAA94570.2| 349|Caenorhabditis elegans Hypothetical
protein C25G4.7 protein.
Length = 349
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 601 YTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQD 708
Y E + F NYLG+++ A + F FA L +D
Sbjct: 281 YVEKLLFMAHTNYLGRLLEACNATIISFHFADLCRD 316
>Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical
protein F10B5.5 protein.
Length = 424
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQM---YTPQQFSSMVLELNA 444
+L GPPGTGKTS A+ + + S++LE+N+
Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINS 214
>AL031633-9|CAA21023.1| 636|Caenorhabditis elegans Hypothetical
protein Y39A1A.12 protein.
Length = 636
Score = 29.1 bits (62), Expect = 4.0
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +1
Query: 220 LFLRRVEKYRPKRLDDLVSHDDIIKTINQFM--KENQLPHLLFYGPPGTGKTSTILACAK 393
L L +V + P R D+ S + I K I + + K + + G PGTGKT+T+ A
Sbjct: 258 LHLSKVPEKLPCR--DIESRE-IEKFIREVIDPKRGESSAMYISGVPGTGKTATVRAVVN 314
Query: 394 QMYTPQQFSSMV-LELNA 444
M ++ V +E+NA
Sbjct: 315 SMKKSKKCQKFVYVEVNA 332
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQM 399
L +GPPGTGKT A A Q+
Sbjct: 180 LLFGPPGTGKTLLARAVASQL 200
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 337 LFYGPPGTGKTSTILACAKQM 399
L +GPPGTGKT A A Q+
Sbjct: 188 LLFGPPGTGKTLLARAVASQL 208
>Z99281-28|CAB16503.1| 633|Caenorhabditis elegans Hypothetical
protein Y57G11C.1 protein.
Length = 633
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 283 DIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQ 411
++I IN ++ + L+ GP G GK ST+++ +Q YTPQ
Sbjct: 389 NVINGINLSIESGKTVALV--GPSGNGK-STLVSLIQQFYTPQ 428
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQ 396
+L YGPPGTGKT A A +
Sbjct: 214 VLLYGPPGTGKTLCARAVANR 234
>Z77666-2|CAB01233.2| 80|Caenorhabditis elegans Hypothetical
protein K08E7.2 protein.
Length = 80
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 253 KRLDDLVSH-DDIIKTINQFMKENQLPH 333
+R+DD+ + DD+ K IN ++ NQ+ H
Sbjct: 48 RRIDDMTTRIDDLEKNINDLLQSNQVEH 75
>Z54271-8|CAA91038.1| 185|Caenorhabditis elegans Hypothetical
protein F21D5.9 protein.
Length = 185
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 476 PLTMPMPLSSEALSSNTIELNCCGV 402
P TM PL + AL S+ + NCC V
Sbjct: 129 PSTMNNPLVANALGSSLVNENCCAV 153
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAK 393
L+ GPPG+GKT T+LA +
Sbjct: 2533 LVLCGPPGSGKTMTLLAALR 2552
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAK 393
L+ GPPG+GKT T+LA +
Sbjct: 2533 LVLCGPPGSGKTMTLLAALR 2552
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +1
Query: 334 LLFYGPPGTGKTS---TILACAKQMYTPQQFSSM--VLELNASDDRGIGIVRGQILSFAS 498
L F+GPPG GKTS +I + Y M V E+ +G + G+++
Sbjct: 508 LCFHGPPGVGKTSIAKSIATALNREYFRFSVGGMTDVAEIKGHRRTYVGAMPGKMIQCMK 567
Query: 499 TRTIFKAGPKLIILDEAD 552
K L+++DE D
Sbjct: 568 K---VKTENPLVLIDEVD 582
>U29613-3|AAC47062.2| 483|Caenorhabditis elegans Hypothetical
protein K02A6.3a protein.
Length = 483
Score = 28.3 bits (60), Expect = 7.0
Identities = 27/108 (25%), Positives = 45/108 (41%)
Frame = +1
Query: 442 ASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVRF 621
A D G G GQIL T + G K + L + ++A + L ++EK+ E + +
Sbjct: 150 AGKDVGTG---GQILHSLKTVLNYLHGLKSLSLVDLQLTHDEADDFLSTLLEKFYEKLTY 206
Query: 622 CIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSE 765
+ N P LQ C F L++ + P++ T + E
Sbjct: 207 LSLLNVTLYPKPLLQVGC----FLKLRKLLVSPQMLSTDTLSAIACLE 250
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACA 390
+L YGPPGTGKT A A
Sbjct: 191 VLLYGPPGTGKTLLARAVA 209
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACA 390
+L YGPPGTGKT A A
Sbjct: 212 VLLYGPPGTGKTLLARAVA 230
>Z81058-7|CAB02920.1| 1011|Caenorhabditis elegans Hypothetical
protein F11E6.7 protein.
Length = 1011
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 770 PPSDIFTPSVVTISCNLGTI*SCLRGAKRNRVH 672
PP TPS++ + + T S + KRNRVH
Sbjct: 566 PPKTPRTPSILRVGKRMSTSSSPMTERKRNRVH 598
>U29244-14|AAC71095.1| 774|Caenorhabditis elegans Fzo (fzo
mitochondrial fusion protein)related protein 1 protein.
Length = 774
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 262 DDLVSHDDIIKTI-NQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQ 411
+++ + D IKTI + F ++N ++F+G GK++TI A + PQ
Sbjct: 80 EEIEAIGDSIKTIMDTFQRDNM--KVVFFGRTSNGKSTTINAMLHEKVLPQ 128
>AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical
protein Y50E8A.16 protein.
Length = 807
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 346 GPPGTGKTSTILACAKQMYTPQ 411
GP G GK ST+++ +Q YTPQ
Sbjct: 584 GPSGNGK-STLVSLIQQFYTPQ 604
>AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb
(recombination protein) homologprotein 2 protein.
Length = 448
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 429
LL G PG GKT+ +A +K++ F S+V
Sbjct: 69 LLVTGEPGAGKTAIAIAISKELGEDTPFVSIV 100
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = +1
Query: 334 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 513
+L +GPPGTGKT I C Q + ++AS + G+ L A
Sbjct: 352 VLLFGPPGTGKT-MIGRC-----VASQCKATFFNISASSLTSKWVGEGEKLVRALFSVAR 405
Query: 514 KAGPKLIILDEADAM 558
P +I +DE D++
Sbjct: 406 LKLPSVIFIDEIDSL 420
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 27.9 bits (59), Expect = 9.2
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 346 GPPGTGKTSTILACAKQMYTP--QQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFKA 519
GPPGTGKT A A + P S LE+ G+G R + + F+ R K
Sbjct: 333 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFV----GVGPARVRDM-FSMAR---KN 384
Query: 520 GPKLIILDEADAM 558
P ++ +DE DA+
Sbjct: 385 SPCILFIDEIDAV 397
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,763,125
Number of Sequences: 27780
Number of extensions: 355152
Number of successful extensions: 1102
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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