Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_E24
         (493 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U57847-1|AAB02266.1|   84|Homo sapiens ribosomal protein S27 pro...   143   3e-34
L19739-1|AAA59867.1|   84|Homo sapiens metallopanstimulin protein.    143   3e-34
BC070219-1|AAH70219.1|   84|Homo sapiens ribosomal protein S27 (...   143   3e-34
BC002658-1|AAH02658.1|   84|Homo sapiens ribosomal protein S27 (...   143   3e-34
AL358472-19|CAI14033.1|   84|Homo sapiens ribosomal protein S27 ...   143   3e-34
AB061845-1|BAB79483.1|   84|Homo sapiens ribosomal protein S27 p...   143   3e-34
BC003667-1|AAH03667.1|   84|Homo sapiens ribosomal protein S27-l...   142   4e-34
BC047648-1|AAH47648.1|  113|Homo sapiens RPS27L protein protein.      128   1e-29
AB007162-1|BAA25825.1|   69|Homo sapiens ribosomal protein S27 p...   120   3e-27
AL358472-18|CAI14032.1|   66|Homo sapiens ribosomal protein S27 ...    51   2e-06

>U57847-1|AAB02266.1|   84|Homo sapiens ribosomal protein S27
           protein.
          Length = 84

 Score =  143 bits (347), Expect = 3e-34
 Identities = 63/75 (84%), Positives = 67/75 (89%), Gaps = 1/75 (1%)
 Frame = +1

Query: 64  PLPSE-RRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGG 240
           P P E +RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG
Sbjct: 10  PSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGG 69

Query: 241 RARLTEGCSFRRKQH 285
           +ARLTEGCSFRRKQH
Sbjct: 70  KARLTEGCSFRRKQH 84


>L19739-1|AAA59867.1|   84|Homo sapiens metallopanstimulin protein.
          Length = 84

 Score =  143 bits (347), Expect = 3e-34
 Identities = 63/75 (84%), Positives = 67/75 (89%), Gaps = 1/75 (1%)
 Frame = +1

Query: 64  PLPSE-RRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGG 240
           P P E +RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG
Sbjct: 10  PSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGG 69

Query: 241 RARLTEGCSFRRKQH 285
           +ARLTEGCSFRRKQH
Sbjct: 70  KARLTEGCSFRRKQH 84


>BC070219-1|AAH70219.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score =  143 bits (347), Expect = 3e-34
 Identities = 63/75 (84%), Positives = 67/75 (89%), Gaps = 1/75 (1%)
 Frame = +1

Query: 64  PLPSE-RRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGG 240
           P P E +RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG
Sbjct: 10  PSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGG 69

Query: 241 RARLTEGCSFRRKQH 285
           +ARLTEGCSFRRKQH
Sbjct: 70  KARLTEGCSFRRKQH 84


>BC002658-1|AAH02658.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score =  143 bits (347), Expect = 3e-34
 Identities = 63/75 (84%), Positives = 67/75 (89%), Gaps = 1/75 (1%)
 Frame = +1

Query: 64  PLPSE-RRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGG 240
           P P E +RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG
Sbjct: 10  PSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGG 69

Query: 241 RARLTEGCSFRRKQH 285
           +ARLTEGCSFRRKQH
Sbjct: 70  KARLTEGCSFRRKQH 84


>AL358472-19|CAI14033.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score =  143 bits (347), Expect = 3e-34
 Identities = 63/75 (84%), Positives = 67/75 (89%), Gaps = 1/75 (1%)
 Frame = +1

Query: 64  PLPSE-RRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGG 240
           P P E +RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG
Sbjct: 10  PSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGG 69

Query: 241 RARLTEGCSFRRKQH 285
           +ARLTEGCSFRRKQH
Sbjct: 70  KARLTEGCSFRRKQH 84


>AB061845-1|BAB79483.1|   84|Homo sapiens ribosomal protein S27
           protein.
          Length = 84

 Score =  143 bits (347), Expect = 3e-34
 Identities = 63/75 (84%), Positives = 67/75 (89%), Gaps = 1/75 (1%)
 Frame = +1

Query: 64  PLPSE-RRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGG 240
           P P E +RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG
Sbjct: 10  PSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGG 69

Query: 241 RARLTEGCSFRRKQH 285
           +ARLTEGCSFRRKQH
Sbjct: 70  KARLTEGCSFRRKQH 84


>BC003667-1|AAH03667.1|   84|Homo sapiens ribosomal protein S27-like
           protein.
          Length = 84

 Score =  142 bits (345), Expect = 4e-34
 Identities = 61/73 (83%), Positives = 66/73 (90%)
 Frame = +1

Query: 67  LPSERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRA 246
           L  E++KHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+A
Sbjct: 12  LEEEKKKHKEKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKA 71

Query: 247 RLTEGCSFRRKQH 285
           RLTEGCSFRRKQH
Sbjct: 72  RLTEGCSFRRKQH 84


>BC047648-1|AAH47648.1|  113|Homo sapiens RPS27L protein protein.
          Length = 113

 Score =  128 bits (308), Expect = 1e-29
 Identities = 55/68 (80%), Positives = 60/68 (88%)
 Frame = +1

Query: 67  LPSERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRA 246
           L  E++KHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+A
Sbjct: 28  LEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKA 87

Query: 247 RLTEGCSF 270
           RLTEG SF
Sbjct: 88  RLTEGISF 95


>AB007162-1|BAA25825.1|   69|Homo sapiens ribosomal protein S27
           protein.
          Length = 69

 Score =  120 bits (289), Expect = 3e-27
 Identities = 53/65 (81%), Positives = 57/65 (87%), Gaps = 1/65 (1%)
 Frame = +1

Query: 64  PLPSE-RRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGG 240
           P P E +RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG
Sbjct: 5   PSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGG 64

Query: 241 RARLT 255
           +ARLT
Sbjct: 65  KARLT 69


>AL358472-18|CAI14032.1|   66|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 66

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 23/30 (76%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
 Frame = +1

Query: 64  PLPSE-RRKHKLKRLVPHPNSYFMDVKCPG 150
           P P E +RKHK KRLV  PNSYFMDVKCPG
Sbjct: 10  PSPEEEKRKHKKKRLVQSPNSYFMDVKCPG 39


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,793,378
Number of Sequences: 237096
Number of extensions: 1216763
Number of successful extensions: 2338
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2330
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)