Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_E22
(697 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 73 5e-14
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 66 3e-12
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 58 1e-09
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 40 4e-04
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 36 0.006
SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces po... 36 0.007
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 34 0.017
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 29 0.64
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 28 1.5
SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces pom... 27 1.9
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 27 1.9
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 26 4.5
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 26 5.9
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 26 5.9
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 25 7.8
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 25 7.8
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 72.5 bits (170), Expect = 5e-14
Identities = 30/52 (57%), Positives = 44/52 (84%)
Frame = +1
Query: 481 KELDGYVGFANLPNQVYRKAVKKGFEFTLMVVGESGLGKSTLINSLFLTEVY 636
++L+GYVGFA+LPNQ +R+ V++GF F ++V+GESG GKSTL+N+L +VY
Sbjct: 70 RQLNGYVGFASLPNQWHRRCVRQGFNFNVLVLGESGSGKSTLVNTLLNRDVY 121
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 66.5 bits (155), Expect = 3e-12
Identities = 29/59 (49%), Positives = 42/59 (71%)
Frame = +1
Query: 463 IEKPKTKELDGYVGFANLPNQVYRKAVKKGFEFTLMVVGESGLGKSTLINSLFLTEVYD 639
+E P L+ YVGF ++ +Q+ RK +++GF+F +MVVG SG GKSTLIN+LF + D
Sbjct: 1 MEVPSAVTLNNYVGFDSITSQINRKLIRRGFQFNVMVVGPSGSGKSTLINTLFSAHLMD 59
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 58.0 bits (134), Expect = 1e-09
Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Frame = +1
Query: 481 KELDGYVGFANLPNQVYRKAVKKGFEFTLMVVGESGLGKSTLINSLFLTEVYDKDKHPGP 660
+E +VG A+LPNQ ++ + G FTLM+ GESGLGK+T N+LF T + H GP
Sbjct: 3 EEETNFVGIADLPNQRHKIVSRNGVAFTLMLCGESGLGKTTFCNTLFSTTI---KSHMGP 59
Query: 661 -SLRXK---KTVGVE 693
+R K KTV +E
Sbjct: 60 EKVRAKHAEKTVEIE 74
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 39.5 bits (88), Expect = 4e-04
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 499 VGFANLPNQVYRKAVKKGFEFTLMVVGESGLGKSTLINS 615
+G + +Q Y + + G + L+VVGES LGK+T +NS
Sbjct: 99 IGINDFNHQHYSRVCRNGIDINLIVVGESSLGKTTFVNS 137
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 35.9 bits (79), Expect = 0.006
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 478 TKELDGYVGFANLPNQVYRKAVKKGFEFTLMVVGESGLGKSTLINSLFLTEVY-DKDKHP 654
T+ L + +LP++ +K T+M+ G SG GK+T N+LF T + +K
Sbjct: 4 TENLQLLLNLDSLPSKRENLIKRKECGLTIMLCGASGTGKTTFFNTLFATSLQPEKSYET 63
Query: 655 GPSLRXKKTVGVE 693
KKT+ V+
Sbjct: 64 AKETIAKKTLEVK 76
>SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 35.5 bits (78), Expect = 0.007
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 532 RKAVKKGFEFTLMVVGESGLGKSTLINSL 618
+K+ KKG LMVVG+ GLG++ IN+L
Sbjct: 44 KKSSKKGIPLNLMVVGDVGLGRTAFINTL 72
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 34.3 bits (75), Expect = 0.017
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = +1
Query: 424 EHPPVAPKPDLPKIEKPKTKELDGYVGFANLPNQVYRKAVKKGFEFT------LMVVGES 585
E P V KP+ P ++ + K + +V FA P RK V F + +VGES
Sbjct: 564 EKPTVVEKPNAPDLKVTQGKVIFSHVSFAYDP----RKPVLSDINFVAQPGKVIALVGES 619
Query: 586 GLGKSTLINSL 618
G GKST++ L
Sbjct: 620 GGGKSTIMRIL 630
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 29.1 bits (62), Expect = 0.64
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +1
Query: 427 HPPVAPKPDLPKIEKPKTKELDGYVGFANLPNQVYRKAVKKGFEFTLMVVGESGLGKSTL 606
H P+ + K + + KE ++ + YR +++ +++V GESG GK+
Sbjct: 134 HLPIYGDDVVRKYQSKQFKETKPHI--FGTADAAYRSLLERRINQSILVTGESGAGKTET 191
Query: 607 INSL--FLTEVYDKDKHPGPSLRXK 675
+ +LT V D L K
Sbjct: 192 TKKVIQYLTSVTDASTSDSQQLEKK 216
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +1
Query: 538 AVKKGFEFTLMVVGESGLGKSTLINSLFLTEVYDKD 645
A KK ++++GESG+GK++++N ++ + KD
Sbjct: 2 AGKKKHLLKVIILGESGVGKTSIMNQ-YVNRKFSKD 36
>SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 762
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +1
Query: 550 GFEFTLM-VVGESGLGKSTLINSLFLT 627
GF + ++ V+G GKSTL+N+LF T
Sbjct: 36 GFNYHVVAVLGSQSTGKSTLLNNLFGT 62
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 27.5 bits (58), Expect = 1.9
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 556 EFTLMVVGESGLGKSTLINSLFLTEVYDK 642
E+ L+VVG+ G+GKS L L + D+
Sbjct: 8 EYKLVVVGDGGVGKSALTIQLIQSHFVDE 36
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 511 NLPNQVYRK-AVKKGFEFTLMVVGESGLGKSTLIN 612
NL + +YR + + + +VG++G GKSTL+N
Sbjct: 400 NLDHALYRDLSFGIDMDSRVAIVGKNGTGKSTLLN 434
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 25.8 bits (54), Expect = 5.9
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -3
Query: 647 LSLSYTSVKK-SEFISVDLPKPDSPTTINVNSKPFFTAFLYT 525
LSLS+ S S+F S DL + +T N N P+F + LY+
Sbjct: 161 LSLSHLSFNDTSDFGSSDLSSSEIESTENDNKAPYF-SLLYS 201
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 25.8 bits (54), Expect = 5.9
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +1
Query: 559 FTLMVVGESGLGKSTLI 609
F L+++G+SG+GKS L+
Sbjct: 9 FKLLLIGDSGVGKSCLL 25
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 25.4 bits (53), Expect = 7.8
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1
Query: 571 VVGESGLGKSTLINSL 618
++GESG GK+TL+N L
Sbjct: 916 LMGESGAGKTTLLNVL 931
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 25.4 bits (53), Expect = 7.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 565 LMVVGESGLGKSTLINSLFLTEVYDKD 645
L+++GE+G GK+T I E Y D
Sbjct: 529 LVLLGETGSGKTTQITQYLAEEGYTSD 555
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,122,067
Number of Sequences: 5004
Number of extensions: 34038
Number of successful extensions: 181
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 321151040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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