Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_E22
(697 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical pr... 86 3e-17
AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical... 68 6e-12
AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical... 68 6e-12
AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical... 68 6e-12
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 32 0.45
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 31 0.79
U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical p... 30 1.8
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 29 2.4
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 29 4.2
Z69635-6|CAA93461.1| 695|Caenorhabditis elegans Hypothetical pr... 24 4.8
Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal t... 28 5.5
AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal t... 28 5.5
AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein ... 28 5.5
AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical... 28 5.5
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 28 7.3
AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical ... 28 7.3
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 28 7.3
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 27 9.7
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 27 9.7
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 27 9.7
U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical pr... 27 9.7
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 27 9.7
>Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical
protein W09C5.2 protein.
Length = 459
Score = 85.8 bits (203), Expect = 3e-17
Identities = 43/72 (59%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Frame = +1
Query: 481 KELDGYVGFANLPNQVYRKAVKKGFEFTLMVVGESGLGKSTLINSLFLTEVYD-KDKHPG 657
KE Y GFAN PNQV+R+AVK GF+FTLMVVG SGLGKST IN+LFL E+ + +K
Sbjct: 22 KENPNYWGFANFPNQVFRRAVKNGFDFTLMVVGRSGLGKSTFINTLFLAEINNLNEKESA 81
Query: 658 PSLRXKKTVGVE 693
P+ TV VE
Sbjct: 82 PTHPHPSTVRVE 93
>AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical
protein Y50E8A.4c protein.
Length = 465
Score = 68.1 bits (159), Expect = 6e-12
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Frame = +1
Query: 397 STENIMKKPE-HPPVAPKPDLPKIEKP-KTKELDGYVGFANLPNQVYRKAVKKGFEFTLM 570
+T KKP P AP P + + +L+G+VGF +LP+Q+ +KAV+ GF+F LM
Sbjct: 44 NTTTTSKKPTIAAPTAPSPIKSLSDHTGRLMQLNGHVGFDSLPHQLVKKAVEAGFQFNLM 103
Query: 571 VVGESGLGKSTLINSLF 621
VGE+G GK+TLI SLF
Sbjct: 104 CVGETGTGKTTLIESLF 120
>AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical
protein Y50E8A.4b protein.
Length = 461
Score = 68.1 bits (159), Expect = 6e-12
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Frame = +1
Query: 397 STENIMKKPE-HPPVAPKPDLPKIEKP-KTKELDGYVGFANLPNQVYRKAVKKGFEFTLM 570
+T KKP P AP P + + +L+G+VGF +LP+Q+ +KAV+ GF+F LM
Sbjct: 44 NTTTTSKKPTIAAPTAPSPIKSLSDHTGRLMQLNGHVGFDSLPHQLVKKAVEAGFQFNLM 103
Query: 571 VVGESGLGKSTLINSLF 621
VGE+G GK+TLI SLF
Sbjct: 104 CVGETGTGKTTLIESLF 120
>AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical
protein Y50E8A.4a protein.
Length = 530
Score = 68.1 bits (159), Expect = 6e-12
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Frame = +1
Query: 397 STENIMKKPE-HPPVAPKPDLPKIEKP-KTKELDGYVGFANLPNQVYRKAVKKGFEFTLM 570
+T KKP P AP P + + +L+G+VGF +LP+Q+ +KAV+ GF+F LM
Sbjct: 113 NTTTTSKKPTIAAPTAPSPIKSLSDHTGRLMQLNGHVGFDSLPHQLVKKAVEAGFQFNLM 172
Query: 571 VVGESGLGKSTLINSLF 621
VGE+G GK+TLI SLF
Sbjct: 173 CVGETGTGKTTLIESLF 189
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/68 (23%), Positives = 35/68 (51%)
Frame = +1
Query: 409 IMKKPEHPPVAPKPDLPKIEKPKTKELDGYVGFANLPNQVYRKAVKKGFEFTLMVVGESG 588
I+KKP + P+ P+ +PK+ +EL+ ++ + + F ++ VG+S
Sbjct: 154 IIKKPLYRPIQPEQSIPKVSS-LAEELNAIGKKVLQKEEIEEEVTQPDRIFKVVFVGDSA 212
Query: 589 LGKSTLIN 612
+GK+ ++
Sbjct: 213 VGKTCFLH 220
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 31.1 bits (67), Expect = 0.79
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 421 PEHPPVAPKPDLPKIEKP 474
P+ PP APK +LPK+ KP
Sbjct: 1632 PQRPPRAPKSELPKVAKP 1649
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 31.1 bits (67), Expect = 0.79
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 421 PEHPPVAPKPDLPKIEKP 474
P+ PP APK +LPK+ KP
Sbjct: 1632 PQRPPRAPKSELPKVAKP 1649
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 31.1 bits (67), Expect = 0.79
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 421 PEHPPVAPKPDLPKIEKP 474
P+ PP APK +LPK+ KP
Sbjct: 1632 PQRPPRAPKSELPKVAKP 1649
>U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical
protein T03F1.1 protein.
Length = 419
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +1
Query: 391 LRSTENIMKKPEHPPVAPKPDLPKIEKPKTKELDG--YVGFANLPNQVYRKAVKKGFEFT 564
L S+ N KP H P +P P KIEK + +D Y L ++ E T
Sbjct: 29 LESSSN--SKPTHQPKSPAPYRQKIEKLSAEVVDSNPYSRLMALQRMGIVNEYERIREKT 86
Query: 565 LMVVGESGLG 594
+ VVG G+G
Sbjct: 87 VAVVGVGGVG 96
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +1
Query: 427 HPPVAPKPDLPKIEKPKTKELDGYVGFANLPNQVYR-KAVKKGFEFTLMVVGESGLGKST 603
+PP+ P L ++ K E +++ NQ+Y A+ K + VVGE L
Sbjct: 369 YPPINVLPSLSRLMKSAIGEGMTREDHSDVSNQLYACYAIGKDVQAMKAVVGEEALSSDD 428
Query: 604 LINSLFLTE 630
L+ FLT+
Sbjct: 429 LLYLEFLTK 437
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/28 (39%), Positives = 23/28 (82%)
Frame = +1
Query: 565 LMVVGESGLGKSTLINSLFLTEVYDKDK 648
++++GESG+GKS+L+ F+ +V+D ++
Sbjct: 14 ILIIGESGVGKSSLM-LRFVDDVFDPEQ 40
>Z69635-6|CAA93461.1| 695|Caenorhabditis elegans Hypothetical
protein F19B6.4 protein.
Length = 695
Score = 24.2 bits (50), Expect(2) = 4.8
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 571 VVGESGLGKSTLINSL 618
++G SG GK+TL+N L
Sbjct: 134 IMGSSGAGKTTLLNIL 149
Score = 22.6 bits (46), Expect(2) = 4.8
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 460 KIEKPKTKELDGYVGFANLPNQVYRKAVKKGFEFTLMVV 576
+ KPKT + A +P+QV A K F+ VV
Sbjct: 70 RFRKPKTLSVTNDTESARIPSQVKTNAKKLVFQNIQAVV 108
>Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical
protein W09D6.6 protein.
Length = 801
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 562 TLMVVGESGLGKSTLINSLF 621
T+ +VG SG GKSTLI LF
Sbjct: 578 TVALVGSSGSGKSTLIRLLF 597
>AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 562 TLMVVGESGLGKSTLINSLF 621
T+ +VG SG GKSTLI LF
Sbjct: 578 TVALVGSSGSGKSTLIRLLF 597
>AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 562 TLMVVGESGLGKSTLINSLF 621
T+ +VG SG GKSTLI LF
Sbjct: 578 TVALVGSSGSGKSTLIRLLF 597
>AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein
protein.
Length = 801
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 562 TLMVVGESGLGKSTLINSLF 621
T+ +VG SG GKSTLI LF
Sbjct: 578 TVALVGSSGSGKSTLIRLLF 597
>AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical
protein Y39G10AR.16 protein.
Length = 227
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 409 IMKKPEHPPVAPKPDLPKIEKPKTKE 486
+ KKPE PPV + P EKPK +E
Sbjct: 139 VEKKPEEPPVEDEAKTPP-EKPKVEE 163
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +1
Query: 421 PEHPPV--APKP-DLPKIEKPKTKELDGYVGFANLPNQVYRKAVKKGFEFT 564
P+ PPV AP P P+ + + GY G P Q YR ++G +++
Sbjct: 599 PQAPPVQAAPAPVQAPQAPQAPPQAYQGYGGPGGPPQQAYRYPPQQGQQYS 649
>AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical
protein Y52B11A.4 protein.
Length = 467
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 559 FTLMVVGESGLGKSTLINSLFLTE 630
+ + VVG++G GKS+LI+ L +E
Sbjct: 238 YKIYVVGDTGTGKSSLISQLITSE 261
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +1
Query: 421 PEHPPV--APKP-DLPKIEKPKTKELDGYVGFANLPNQVYRKAVKKGFEFT 564
P+ PPV AP P P+ + + GY G P Q YR ++G +++
Sbjct: 599 PQAPPVQAAPAPVQAPQAPQAPPQAYQGYGGPGGPPQQAYRYPPQQGQQYS 649
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical
protein F52B5.3 protein.
Length = 1425
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +1
Query: 511 NLPNQVYRKAVKKGFEFTLMVV--GESGLGKSTLINSLFLTEVYDKDKH 651
+LP Y V K +V+ G +G GK+T + L E ++ +KH
Sbjct: 180 SLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILDEAHENNKH 228
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 27.5 bits (58), Expect = 9.7
Identities = 9/17 (52%), Positives = 16/17 (94%)
Frame = +1
Query: 559 FTLMVVGESGLGKSTLI 609
F L+++G+SG+GKS+L+
Sbjct: 11 FKLLIIGDSGVGKSSLL 27
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +1
Query: 400 TENIMKKPEHPPVAPKPDLPKIEKPKTKELDGYVGFANLPNQVYRKAVKKGFE 558
+EN KP P PKP +EKPK + F ++ Q YRK ++ E
Sbjct: 445 SENATGKPSSPTSPPKP----VEKPKIATVQ-ESKFVSVAAQNYRKQIQDAKE 492
>U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical protein
T26A5.5a protein.
Length = 1076
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = -3
Query: 149 ALTPPPLTVSDLK 111
A+TPPP+T+SDLK
Sbjct: 1020 AITPPPVTLSDLK 1032
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 27.5 bits (58), Expect = 9.7
Identities = 9/17 (52%), Positives = 16/17 (94%)
Frame = +1
Query: 559 FTLMVVGESGLGKSTLI 609
F L+++G+SG+GKS+L+
Sbjct: 11 FKLLIIGDSGVGKSSLL 27
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,989,673
Number of Sequences: 27780
Number of extensions: 196125
Number of successful extensions: 965
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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