Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_E16
         (794 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.8  
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      22   6.5  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.6  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 609 KLIKIKAMNTATLVVNIVSMTRSTLVITTGTV 514
           K+I  K   T T++   + MT++ LV   GT+
Sbjct: 72  KIIPNKNDGTLTIIDTGIGMTKADLVHNLGTI 103


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +2

Query: 368 WAEWNSSNLYEKHDSTWKGK 427
           W+ W      E  DS W+G+
Sbjct: 2   WSLWKVRGRCEGKDSKWRGE 21


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 541 RTGHRHDIHHQRCCVHSFNLYQFWMCDAL 627
           +TGH + ++     V  + L   W  DAL
Sbjct: 128 KTGHPYFVNQLFSAVDPYGLVAQWATDAL 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,111
Number of Sequences: 336
Number of extensions: 4661
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)