Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_E16
         (794 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   0.21 
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   6.2  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   8.2  
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    23   8.2  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.0 bits (52), Expect(2) = 0.21
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 197 CPLWVICQNVPRLTAVFS 250
           CPLW +C +  R T  F+
Sbjct: 555 CPLWPLCGSASRQTQTFT 572



 Score = 21.8 bits (44), Expect(2) = 0.21
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 143 KMCPIWPL 166
           K CP+WPL
Sbjct: 553 KACPLWPL 560


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +1

Query: 124 ININDIENVSDLAITPDRLVRTGVVSVVGDMPECAQTNGGLLASK 258
           IN+N   +  DLA+   R+ R  V  +V ++    + NG  +A +
Sbjct: 6   INVNRSRSAQDLALNTMRVERADVCLMV-ELHSVPRNNGNWVADR 49


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 85  ESLDFPTN*CRFNININDIENVSDL 159
           +S DFP N   FN  I +I N  DL
Sbjct: 647 DSSDFPCNSEEFNKLIQEIGNQQDL 671


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -2

Query: 727 VAQTEGTEWHKKELSDHSYGGSDRSLDDVTHRRPVHRTSK 608
           +AQ +   W  ++ S  +     R++ + TH+R V+ TSK
Sbjct: 1   MAQKQDRSWRYQKSSIGAIEFRLRTISNRTHQRHVYGTSK 40


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 892,378
Number of Sequences: 2352
Number of extensions: 19993
Number of successful extensions: 42
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83576403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)