Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_E16
(794 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X12458-1|CAA30998.1| 477|Homo sapiens protein ( Human P3 gene. ). 42 0.002
L44140-8|AAA92651.1| 477|Homo sapiens P3 protein. 42 0.002
BX664739-5|CAI43238.1| 448|Homo sapiens solute carrier family 1... 42 0.002
BX664739-3|CAI43236.2| 477|Homo sapiens solute carrier family 1... 42 0.002
BC004966-1|AAH04966.1| 448|Homo sapiens SLC10A3 protein protein. 42 0.002
Z54350-1|CAA91161.1| 125|Homo sapiens ileal sodium-dependent bi... 42 0.003
U67674-1|AAC95398.1| 348|Homo sapiens ileal sodium dependent bi... 42 0.003
U10417-1|AAC51870.1| 348|Homo sapiens ileal sodium-dependent bi... 42 0.003
BC130523-1|AAI30524.1| 348|Homo sapiens solute carrier family 1... 42 0.003
BC130521-1|AAI30522.1| 348|Homo sapiens solute carrier family 1... 42 0.003
AL161771-1|CAC39447.1| 348|Homo sapiens solute carrier family 1... 42 0.003
AE014304-1|AAN16026.1| 348|Homo sapiens ileal sodium-dependent ... 42 0.003
L21893-1|AAA36381.1| 349|Homo sapiens Na/taurocholate cotranspo... 41 0.006
BC126298-1|AAI26299.1| 349|Homo sapiens solute carrier family 1... 41 0.006
BC074724-1|AAH74724.1| 349|Homo sapiens solute carrier family 1... 41 0.006
BC069822-1|AAH69822.1| 349|Homo sapiens solute carrier family 1... 41 0.006
BC069799-1|AAH69799.1| 349|Homo sapiens solute carrier family 1... 41 0.006
AY544127-1|AAT11158.1| 349|Homo sapiens growth-inhibiting prote... 41 0.006
EF437223-1|ABO38126.1| 377|Homo sapiens sodium-dependent organi... 40 0.008
BC107052-1|AAI07053.1| 377|Homo sapiens solute carrier family 1... 40 0.008
BC107051-1|AAI07052.1| 377|Homo sapiens solute carrier family 1... 40 0.008
AJ583502-1|CAE47477.1| 377|Homo sapiens sodium-dependent organi... 40 0.008
AY825924-1|AAV80707.1| 438|Homo sapiens SLC10A5 protein. 36 0.22
M60503-1|AAA63243.1| 1084|Homo sapiens profilaggrin protein. 30 8.4
M60502-1|AAA63248.1| 797|Homo sapiens profilaggrin protein. 30 8.4
AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein. 30 8.4
>X12458-1|CAA30998.1| 477|Homo sapiens protein ( Human P3 gene. ).
Length = 477
Score = 42.3 bits (95), Expect = 0.002
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +2
Query: 581 VFIALIFIN---FGCAMHWPTVRDVIKRPIGPAIGMVGQFLFMPLSSFGLGYVIFPNSPA 751
+ + LIF+N FGC + ++ +++ P +G++GQFL MPL +F L +F A
Sbjct: 195 LLLPLIFVNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAF-LMAKVFMLPKA 253
Query: 752 MRLGMSSRAXPPG 790
+ LG+ PG
Sbjct: 254 LALGLIITCSSPG 266
>L44140-8|AAA92651.1| 477|Homo sapiens P3 protein.
Length = 477
Score = 42.3 bits (95), Expect = 0.002
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +2
Query: 581 VFIALIFIN---FGCAMHWPTVRDVIKRPIGPAIGMVGQFLFMPLSSFGLGYVIFPNSPA 751
+ + LIF+N FGC + ++ +++ P +G++GQFL MPL +F L +F A
Sbjct: 195 LLLPLIFVNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAF-LMAKVFMLPKA 253
Query: 752 MRLGMSSRAXPPG 790
+ LG+ PG
Sbjct: 254 LALGLIITCSSPG 266
>BX664739-5|CAI43238.1| 448|Homo sapiens solute carrier family 10
(sodium/bile acid cotransporter family), member 3
protein.
Length = 448
Score = 42.3 bits (95), Expect = 0.002
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +2
Query: 581 VFIALIFIN---FGCAMHWPTVRDVIKRPIGPAIGMVGQFLFMPLSSFGLGYVIFPNSPA 751
+ + LIF+N FGC + ++ +++ P +G++GQFL MPL +F L +F A
Sbjct: 166 LLLPLIFVNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAF-LMAKVFMLPKA 224
Query: 752 MRLGMSSRAXPPG 790
+ LG+ PG
Sbjct: 225 LALGLIITCSSPG 237
>BX664739-3|CAI43236.2| 477|Homo sapiens solute carrier family 10
(sodium/bile acid cotransporter family), member 3
protein.
Length = 477
Score = 42.3 bits (95), Expect = 0.002
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +2
Query: 581 VFIALIFIN---FGCAMHWPTVRDVIKRPIGPAIGMVGQFLFMPLSSFGLGYVIFPNSPA 751
+ + LIF+N FGC + ++ +++ P +G++GQFL MPL +F L +F A
Sbjct: 195 LLLPLIFVNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAF-LMAKVFMLPKA 253
Query: 752 MRLGMSSRAXPPG 790
+ LG+ PG
Sbjct: 254 LALGLIITCSSPG 266
>BC004966-1|AAH04966.1| 448|Homo sapiens SLC10A3 protein protein.
Length = 448
Score = 42.3 bits (95), Expect = 0.002
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +2
Query: 581 VFIALIFIN---FGCAMHWPTVRDVIKRPIGPAIGMVGQFLFMPLSSFGLGYVIFPNSPA 751
+ + LIF+N FGC + ++ +++ P +G++GQFL MPL +F L +F A
Sbjct: 166 LLLPLIFVNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAF-LMAKVFMLPKA 224
Query: 752 MRLGMSSRAXPPG 790
+ LG+ PG
Sbjct: 225 LALGLIITCSSPG 237
>Z54350-1|CAA91161.1| 125|Homo sapiens ileal sodium-dependent bile
acid transporter protein.
Length = 125
Score = 41.9 bits (94), Expect = 0.003
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 491 DTFSVTNGTVPVVI-TRVERVIDTIFTTSVAVFIALIFINFGCAMHWPTVRDVIKRPIGP 667
D +V +G VV + ++ + +T + + +AL+ + GC + IKRP G
Sbjct: 9 DNATVCSGASCVVPESNFNNILSVVLSTVLTILLALVMFSMGCNVEIKKFLGHIKRPWGI 68
Query: 668 AIGMVGQFLFMPLSSF 715
+G + QF MPL+ F
Sbjct: 69 CVGFLCQFGIMPLTGF 84
>U67674-1|AAC95398.1| 348|Homo sapiens ileal sodium dependent bile
acid transporter protein.
Length = 348
Score = 41.9 bits (94), Expect = 0.003
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 491 DTFSVTNGTVPVVI-TRVERVIDTIFTTSVAVFIALIFINFGCAMHWPTVRDVIKRPIGP 667
D +V +G VV + ++ + +T + + +AL+ + GC + IKRP G
Sbjct: 9 DNATVCSGASCVVPESNFNNILSVVLSTVLTILLALVMFSMGCNVEIKKFLGHIKRPWGI 68
Query: 668 AIGMVGQFLFMPLSSF 715
+G + QF MPL+ F
Sbjct: 69 CVGFLCQFGIMPLTGF 84
>U10417-1|AAC51870.1| 348|Homo sapiens ileal sodium-dependent bile
acid transporter protein.
Length = 348
Score = 41.9 bits (94), Expect = 0.003
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 491 DTFSVTNGTVPVVI-TRVERVIDTIFTTSVAVFIALIFINFGCAMHWPTVRDVIKRPIGP 667
D +V +G VV + ++ + +T + + +AL+ + GC + IKRP G
Sbjct: 9 DNATVCSGASCVVPESNFNNILSVVLSTVLTILLALVMFSMGCNVEIKKFLGHIKRPWGI 68
Query: 668 AIGMVGQFLFMPLSSF 715
+G + QF MPL+ F
Sbjct: 69 CVGFLCQFGIMPLTGF 84
>BC130523-1|AAI30524.1| 348|Homo sapiens solute carrier family 10
(sodium/bile acid cotransporter family), member 2
protein.
Length = 348
Score = 41.9 bits (94), Expect = 0.003
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 491 DTFSVTNGTVPVVI-TRVERVIDTIFTTSVAVFIALIFINFGCAMHWPTVRDVIKRPIGP 667
D +V +G VV + ++ + +T + + +AL+ + GC + IKRP G
Sbjct: 9 DNATVCSGASCVVPESNFNNILSVVLSTVLTILLALVMFSMGCNVEIKKFLGHIKRPWGI 68
Query: 668 AIGMVGQFLFMPLSSF 715
+G + QF MPL+ F
Sbjct: 69 CVGFLCQFGIMPLTGF 84
>BC130521-1|AAI30522.1| 348|Homo sapiens solute carrier family 10
(sodium/bile acid cotransporter family), member 2
protein.
Length = 348
Score = 41.9 bits (94), Expect = 0.003
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 491 DTFSVTNGTVPVVI-TRVERVIDTIFTTSVAVFIALIFINFGCAMHWPTVRDVIKRPIGP 667
D +V +G VV + ++ + +T + + +AL+ + GC + IKRP G
Sbjct: 9 DNATVCSGASCVVPESNFNNILSVVLSTVLTILLALVMFSMGCNVEIKKFLGHIKRPWGI 68
Query: 668 AIGMVGQFLFMPLSSF 715
+G + QF MPL+ F
Sbjct: 69 CVGFLCQFGIMPLTGF 84
>AL161771-1|CAC39447.1| 348|Homo sapiens solute carrier family 10
(sodium/bile acid cotransporter family), member 2
protein.
Length = 348
Score = 41.9 bits (94), Expect = 0.003
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 491 DTFSVTNGTVPVVI-TRVERVIDTIFTTSVAVFIALIFINFGCAMHWPTVRDVIKRPIGP 667
D +V +G VV + ++ + +T + + +AL+ + GC + IKRP G
Sbjct: 9 DNATVCSGASCVVPESNFNNILSVVLSTVLTILLALVMFSMGCNVEIKKFLGHIKRPWGI 68
Query: 668 AIGMVGQFLFMPLSSF 715
+G + QF MPL+ F
Sbjct: 69 CVGFLCQFGIMPLTGF 84
>AE014304-1|AAN16026.1| 348|Homo sapiens ileal sodium-dependent
bile acid transporter protein.
Length = 348
Score = 41.9 bits (94), Expect = 0.003
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 491 DTFSVTNGTVPVVI-TRVERVIDTIFTTSVAVFIALIFINFGCAMHWPTVRDVIKRPIGP 667
D +V +G VV + ++ + +T + + +AL+ + GC + IKRP G
Sbjct: 9 DNATVCSGASCVVPESNFNNILSVVLSTVLTILLALVMFSMGCNVEIKKFLGHIKRPWGI 68
Query: 668 AIGMVGQFLFMPLSSF 715
+G + QF MPL+ F
Sbjct: 69 CVGFLCQFGIMPLTGF 84
>L21893-1|AAA36381.1| 349|Homo sapiens Na/taurocholate
cotransporting polypeptide protein.
Length = 349
Score = 40.7 bits (91), Expect = 0.006
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +2
Query: 542 ERVIDTIFTTSVAVFIALIFINFGCAMHWPTVRDVIKRPIGPAIGMVGQFLFMPLSSFGL 721
+R D + + + I ++ GC M + ++ + +P G AI +V Q+ MPL++F L
Sbjct: 20 KRPTDLALSVILVFMLFFIMLSLGCTMEFSKIKAHLWKPKGLAIALVAQYGIMPLTAFVL 79
Query: 722 GYV 730
G V
Sbjct: 80 GKV 82
>BC126298-1|AAI26299.1| 349|Homo sapiens solute carrier family 10
(sodium/bile acid cotransporter family), member 1
protein.
Length = 349
Score = 40.7 bits (91), Expect = 0.006
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +2
Query: 542 ERVIDTIFTTSVAVFIALIFINFGCAMHWPTVRDVIKRPIGPAIGMVGQFLFMPLSSFGL 721
+R D + + + I ++ GC M + ++ + +P G AI +V Q+ MPL++F L
Sbjct: 20 KRPTDLALSVILVFMLFFIMLSLGCTMEFSKIKAHLWKPKGLAIALVAQYGIMPLTAFVL 79
Query: 722 GYV 730
G V
Sbjct: 80 GKV 82
>BC074724-1|AAH74724.1| 349|Homo sapiens solute carrier family 10
(sodium/bile acid cotransporter family), member 1
protein.
Length = 349
Score = 40.7 bits (91), Expect = 0.006
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +2
Query: 542 ERVIDTIFTTSVAVFIALIFINFGCAMHWPTVRDVIKRPIGPAIGMVGQFLFMPLSSFGL 721
+R D + + + I ++ GC M + ++ + +P G AI +V Q+ MPL++F L
Sbjct: 20 KRPTDLALSVILVFMLFFIMLSLGCTMEFSKIKAHLWKPKGLAIALVAQYGIMPLTAFVL 79
Query: 722 GYV 730
G V
Sbjct: 80 GKV 82
>BC069822-1|AAH69822.1| 349|Homo sapiens solute carrier family 10
(sodium/bile acid cotransporter family), member 1
protein.
Length = 349
Score = 40.7 bits (91), Expect = 0.006
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +2
Query: 542 ERVIDTIFTTSVAVFIALIFINFGCAMHWPTVRDVIKRPIGPAIGMVGQFLFMPLSSFGL 721
+R D + + + I ++ GC M + ++ + +P G AI +V Q+ MPL++F L
Sbjct: 20 KRPTDLALSVILVFMLFFIMLSLGCTMEFSKIKAHLWKPKGLAIALVAQYGIMPLTAFVL 79
Query: 722 GYV 730
G V
Sbjct: 80 GKV 82
>BC069799-1|AAH69799.1| 349|Homo sapiens solute carrier family 10
(sodium/bile acid cotransporter family), member 1
protein.
Length = 349
Score = 40.7 bits (91), Expect = 0.006
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +2
Query: 542 ERVIDTIFTTSVAVFIALIFINFGCAMHWPTVRDVIKRPIGPAIGMVGQFLFMPLSSFGL 721
+R D + + + I ++ GC M + ++ + +P G AI +V Q+ MPL++F L
Sbjct: 20 KRPTDLALSVILVFMLFFIMLSLGCTMEFSKIKAHLWKPKGLAIALVAQYGIMPLTAFVL 79
Query: 722 GYV 730
G V
Sbjct: 80 GKV 82
>AY544127-1|AAT11158.1| 349|Homo sapiens growth-inhibiting protein
29 protein.
Length = 349
Score = 40.7 bits (91), Expect = 0.006
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +2
Query: 542 ERVIDTIFTTSVAVFIALIFINFGCAMHWPTVRDVIKRPIGPAIGMVGQFLFMPLSSFGL 721
+R D + + + I ++ GC M + ++ + +P G AI +V Q+ MPL++F L
Sbjct: 20 KRPTDLALSVILVFMLFFIMLSLGCTMEFSKIKAHLWKPKGLAIALVAQYGIMPLTAFVL 79
Query: 722 GYV 730
G V
Sbjct: 80 GKV 82
>EF437223-1|ABO38126.1| 377|Homo sapiens sodium-dependent organic
anion transporter protein.
Length = 377
Score = 40.3 bits (90), Expect = 0.008
Identities = 21/80 (26%), Positives = 40/80 (50%)
Frame = +2
Query: 551 IDTIFTTSVAVFIALIFINFGCAMHWPTVRDVIKRPIGPAIGMVGQFLFMPLSSFGLGYV 730
++ +FT V + L+ + GC++ + I+RP G A+G++ QF MP +++ L +
Sbjct: 30 LELVFTVVSTVMMGLLMFSLGCSVEIRKLWSHIRRPWGIAVGLLCQFGLMPFTAYLLA-I 88
Query: 731 IFPNSPAMRLGMSSRAXPPG 790
F P + + PG
Sbjct: 89 SFSLKPVQAIAVLIMGCCPG 108
>BC107052-1|AAI07053.1| 377|Homo sapiens solute carrier family 10
(sodium/bile acid cotransporter family), member 6
protein.
Length = 377
Score = 40.3 bits (90), Expect = 0.008
Identities = 21/80 (26%), Positives = 40/80 (50%)
Frame = +2
Query: 551 IDTIFTTSVAVFIALIFINFGCAMHWPTVRDVIKRPIGPAIGMVGQFLFMPLSSFGLGYV 730
++ +FT V + L+ + GC++ + I+RP G A+G++ QF MP +++ L +
Sbjct: 30 LELVFTVVSTVMMGLLMFSLGCSVEIRKLWSHIRRPWGIAVGLLCQFGLMPFTAYLLA-I 88
Query: 731 IFPNSPAMRLGMSSRAXPPG 790
F P + + PG
Sbjct: 89 SFSLKPVQAIAVLIMGCCPG 108
>BC107051-1|AAI07052.1| 377|Homo sapiens solute carrier family 10
(sodium/bile acid cotransporter family), member 6
protein.
Length = 377
Score = 40.3 bits (90), Expect = 0.008
Identities = 21/80 (26%), Positives = 40/80 (50%)
Frame = +2
Query: 551 IDTIFTTSVAVFIALIFINFGCAMHWPTVRDVIKRPIGPAIGMVGQFLFMPLSSFGLGYV 730
++ +FT V + L+ + GC++ + I+RP G A+G++ QF MP +++ L +
Sbjct: 30 LELVFTVVSTVMMGLLMFSLGCSVEIRKLWSHIRRPWGIAVGLLCQFGLMPFTAYLLA-I 88
Query: 731 IFPNSPAMRLGMSSRAXPPG 790
F P + + PG
Sbjct: 89 SFSLKPVQAIAVLIMGCCPG 108
>AJ583502-1|CAE47477.1| 377|Homo sapiens sodium-dependent organic
anion transporter protein.
Length = 377
Score = 40.3 bits (90), Expect = 0.008
Identities = 21/80 (26%), Positives = 40/80 (50%)
Frame = +2
Query: 551 IDTIFTTSVAVFIALIFINFGCAMHWPTVRDVIKRPIGPAIGMVGQFLFMPLSSFGLGYV 730
++ +FT V + L+ + GC++ + I+RP G A+G++ QF MP +++ L +
Sbjct: 30 LELVFTVVSTVMMGLLMFSLGCSVEIRKLWSHIRRPWGIAVGLLCQFGLMPFTAYLLA-I 88
Query: 731 IFPNSPAMRLGMSSRAXPPG 790
F P + + PG
Sbjct: 89 SFSLKPVQAIAVLIMGCCPG 108
>AY825924-1|AAV80707.1| 438|Homo sapiens SLC10A5 protein.
Length = 438
Score = 35.5 bits (78), Expect = 0.22
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +2
Query: 581 VFIALIFIN---FGCAMHWPTVRDVIKRPIGPAIGMVGQFLFMPLSSFGLGYVI-FPNSP 748
+ + LI +N FGC + + V KRP+ +G V QF MP F L ++ P +
Sbjct: 146 LILPLILLNKCAFGCKIELQLFQTVWKRPLPVILGAVTQFFLMPFCGFLLSQIVALPEAQ 205
Query: 749 AMRLGMS 769
A + M+
Sbjct: 206 AFGVVMT 212
>M60503-1|AAA63243.1| 1084|Homo sapiens profilaggrin protein.
Length = 1084
Score = 30.3 bits (65), Expect = 8.4
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 433 HQWKFYR*DKLGTGSKKGRR-YVFRHQRYGSRGDHEGRTGHRHDIH 567
H Y GT +KG+ V+RH YGS G +G RH H
Sbjct: 974 HSSSSYHYQSEGTERQKGQSGLVWRHGSYGSADYDYGESGFRHSQH 1019
>M60502-1|AAA63248.1| 797|Homo sapiens profilaggrin protein.
Length = 797
Score = 30.3 bits (65), Expect = 8.4
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 433 HQWKFYR*DKLGTGSKKGRR-YVFRHQRYGSRGDHEGRTGHRHDIH 567
H Y GT +KG+ V+RH YGS G +G RH H
Sbjct: 687 HSSSSYHYQSEGTERQKGQSGLVWRHGSYGSADYDYGESGFRHSQH 732
>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
Length = 4061
Score = 30.3 bits (65), Expect = 8.4
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 433 HQWKFYR*DKLGTGSKKGRR-YVFRHQRYGSRGDHEGRTGHRHDIH 567
H Y GT +KG+ V+RH YGS G +G RH H
Sbjct: 3951 HSSSSYHYQSEGTERQKGQSGLVWRHGSYGSADYDYGESGFRHSQH 3996
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,571,215
Number of Sequences: 237096
Number of extensions: 2809021
Number of successful extensions: 6620
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 6252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6604
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -