Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_E15
(783 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 37 0.003
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 30 0.33
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 0.57
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 28 1.3
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 28 1.7
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 28 1.7
SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family |Schizosa... 27 3.0
SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr 1|||Ma... 27 3.0
SPBPJ4664.05 |||conserved fungal protein|Schizosaccharomyces pom... 27 3.0
SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccha... 27 3.0
SPBC18H10.04c |sce3|tif48|translation initiation factor eIF4B|Sc... 27 4.0
SPAC29A4.09 |||rRNA processing protein Rrp17|Schizosaccharomyces... 27 4.0
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 26 5.3
SPBC17G9.03c |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr... 26 5.3
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 26 7.0
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 25 9.3
SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomy... 25 9.3
SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr 2|... 25 9.3
SPCC285.08 |ret2||coatomer delta subunit Ret2 |Schizosaccharomyc... 25 9.3
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 37.1 bits (82), Expect = 0.003
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 70 QSSNQQGRAXRFTFQSTVRQLE--RKXLAEKLSKEADLKEQQRRTELEAMRRVEEEFQRK 243
+ Q+ A R Q+ + LE R+ A K +E LK +Q + + E R+ EE Q++
Sbjct: 609 EEERQRREAERLAEQAAQKALEAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQKQ 668
Query: 244 RAREKANIRQQ 276
+ REK +QQ
Sbjct: 669 KEREKKLKKQQ 679
Score = 27.9 bits (59), Expect = 1.7
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 121 VRQLERKXLAEKLSKEADLKEQQRR-TELEAMRRVEEEFQRKRAREKANIRQQLRL 285
+R+ E+K +K K A +E+QRR E A + ++ + KR E R++ RL
Sbjct: 591 IREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEEARKKREEQRL 646
Score = 27.1 bits (57), Expect = 3.0
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 70 QSSNQQGRAXRFTFQSTVRQLERKXLAEKLSKEAD---LKEQQRRTELEAMRRVEEEFQR 240
+ +Q R + +Q ER+ +K +EAD + +QR E E R +EE +R
Sbjct: 649 EQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLREEEEKRILEERKRR 708
Query: 241 KRAREKANIRQQLRLV 288
++ ++ R++ L+
Sbjct: 709 EKLDKEEEERRRRELL 724
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 30.3 bits (65), Expect = 0.33
Identities = 31/148 (20%), Positives = 59/148 (39%), Gaps = 6/148 (4%)
Frame = +1
Query: 184 QQRRTELEAMRRVEEEFQRKRAREKANIRQQLRL-VSSGAASMPTTTPHSKARDEPDGSC 360
+QR+ L R EEE QR R + + L L + A+ +AR+
Sbjct: 110 EQRQVALREAREAEEELQRARQYNDRSTSEALELEARAKKAAQDAELASERAREAQSSIE 169
Query: 361 RDSPAAER-SRDSRQRHSNASSEISARSKSTTPIRCVELSEWRTERAGRVYRDWAAAQ-- 531
R + E+ +R+ +R + A E + + V+++ + + A + W A +
Sbjct: 170 RSASLREKQAREEAERAATALREAELKHRLAQANADVDVANSKLDIALKNEAAWKAERES 229
Query: 532 --AHDHPPATARMPKSTQALYNAAETEA 609
AH + + +A + AA +A
Sbjct: 230 SLAHQKAVIDSARAELERARHEAAVADA 257
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.5 bits (63), Expect = 0.57
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Frame = +1
Query: 139 KXLAEKLSKEADLKEQQRRTEL-EAMRRVEEEFQRKRAREKANIRQQLRLVSSGAASMPT 315
K L E + K R+EL + +RVE + K + K +Q V +++
Sbjct: 991 KHLVESEISTREEKITSLRSELLDLNKRVEVLKEEKESSSKELAKQLEDAVREKDSALSF 1050
Query: 316 TTPHSKARDEPDG---SCRDSPAAERSRDSRQRHSNASSEISARSKSTTPIR 462
+ K R + D S ++ ERS ++ HSN SEI + ++T +R
Sbjct: 1051 KKDYEKIRSDADRVITSLKEDIEKERSL-MKECHSNYESEIVSHGRTTQKLR 1101
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 286 VSSGAASMPTTTPHSKARDEPDGSCRDSPAAERSRDSRQRHSNASSEISARSKSTT 453
VSS + S T++ S + + SP++ S S S++SS S+ S S++
Sbjct: 127 VSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSS 182
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 27.9 bits (59), Expect = 1.7
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 277 LRLVSSGAASMPTTTPHSKARDEPDGSCR-DSPAAERSRDSRQRHSNASSEISARSKS 447
LR SS PT++ + KA D+P+ S + ++P + + HSN S +A+ S
Sbjct: 347 LRSDSSKPNEAPTSSENIKA-DQPENSTKQENPEEDMQIKDAEEHSNLESTPAAQQTS 403
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 27.9 bits (59), Expect = 1.7
Identities = 26/92 (28%), Positives = 38/92 (41%)
Frame = +1
Query: 124 RQLERKXLAEKLSKEADLKEQQRRTELEAMRRVEEEFQRKRAREKANIRQQLRLVSSGAA 303
++ E++ +AEKL E+QRR + E + + K A +ANI A
Sbjct: 831 KEREQREMAEKL-------ERQRRIQQERDEEISRKLAEKAAARRANI----------GA 873
Query: 304 SMPTTTPHSKARDEPDGSCRDSPAAERSRDSR 399
S P+ + G RDSP R SR
Sbjct: 874 SSPSPGAWRRGGASAGGVSRDSPRYSRGGYSR 905
>SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 707
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +1
Query: 112 QSTVRQLERKXLAEKLSKEADLKEQQRRTELEAMRRVEEEFQRKRAREKANI 267
Q R+ +RK + E + ++ + KEQ R+ + +A++ + E E +I
Sbjct: 654 QRQTREEQRKLIRESVQQDQEHKEQMRQKKKQALKSDDIELDDLSEEEAEDI 705
>SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 111
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 124 RQLERKXLAEKLSKEADLKEQQRRTELEAMRRVEEEFQRKRAREKAN 264
++ +R AEK+ K + R EL + ++ R+R REK N
Sbjct: 59 KEEQRAAHAEKIRTRRQAKADRERMELLQAKLHQKVIDRRRRREKRN 105
>SPBPJ4664.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 163
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -1
Query: 264 IRLLPRTLTL--ELFFYPPHGLQFGSSLLL 181
+ L+P TL LFF PP L G SLL+
Sbjct: 65 VHLMPTVYTLIDYLFFSPPFSLSIGPSLLV 94
>SPCC1183.11 ||SPCC31H12.01|MS ion channel protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1011
Score = 27.1 bits (57), Expect = 3.0
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +1
Query: 124 RQLERKXLAEKLSKEADLKEQQRRTELEAMRRVEEEFQRKRAREKANIRQQLRLVSSGAA 303
++L R L + + + A + +R E E R EEE++R + +N + +SG A
Sbjct: 909 KRLGRDSLPDAVIENAGTEAMRREAE-ERRRAEEEEYERSQQESSSNEENENASRTSG-A 966
Query: 304 SMPTTTPHSKARDEPDGSCRDSPAAER--SRDSRQRHSNASSEISAR 438
++ S+ P S R P + +D R+ + N +S+ SAR
Sbjct: 967 RFSFSSKASRLSARP--SARTVPPLQHISIQDLREPNENNTSK-SAR 1010
>SPBC18H10.04c |sce3|tif48|translation initiation factor
eIF4B|Schizosaccharomyces pombe|chr 2|||Manual
Length = 388
Score = 26.6 bits (56), Expect = 4.0
Identities = 30/138 (21%), Positives = 52/138 (37%), Gaps = 1/138 (0%)
Frame = +1
Query: 280 RLVSSGAASMPTTTPHSKARDEPDGSCRDSPAAERSRDSRQRHSNASSEISARSKSTTPI 459
R +SG P P + R+EP R P R R R ++ + +S++ +
Sbjct: 202 RRTNSGRFRDPARDPSDRVREEPREWVRRGPLPPRESSERPR-------LNLKPRSSSNV 254
Query: 460 RCVELSEWRTERAGRVYRD-WAAAQAHDHPPATARMPKSTQALYNAAETEAFSGSPRSDN 636
T + + RD + A+ D+ R+ + A T++F R DN
Sbjct: 255 NTEATPSATTTTSSKPKRDPFGGAKPVDNTSVLQRVEEKL-----AKRTQSFR---REDN 306
Query: 637 YRLEFARGRSPRTPRAPR 690
E + R P +A +
Sbjct: 307 ANRERSTSRKPSADKAEK 324
>SPAC29A4.09 |||rRNA processing protein Rrp17|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 26.6 bits (56), Expect = 4.0
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = +1
Query: 127 QLERKXLAEKLSKEADLKEQQRRTELEAMRRVEEEFQRKRAREKANIRQQLRLVSSGAAS 306
QLE++ E+L+ L+EQ++R EL +E ++ + +Q+ S +
Sbjct: 55 QLEQQKREERLALRKSLREQRKR-ELAERLAFSKELNSSLENDEESSQQEDSSSKSDSEE 113
Query: 307 MPTTTPHSKARDEPD 351
+ P + DE D
Sbjct: 114 ESSMEPKTTEYDEDD 128
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +1
Query: 370 PAAERSRDSRQRHSNASSEISARSKSTTPIRCVELSEWRT 489
P S+ ++ H N S++S +++ T ++ ELS +T
Sbjct: 634 PKQSSSQVPKENHHNIQSKLSINTEAATDLKANELSSPKT 673
>SPBC17G9.03c |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 591
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 235 QRKRAREKANIRQQLRLVSSGAASMPTTTPHSKARDEPD 351
+++RARE A ++Q + AAS P P S ++ E D
Sbjct: 35 EKQRARELAKAKKQ----AEKAASAPVAAPKSSSKKEED 69
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 25.8 bits (54), Expect = 7.0
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 283 LVSSGAASMPTTTPHSKARDEPDGSCRDSPAAERSRDSRQRHSNASSEISA 435
LVSS +S + TP + + S S +++ S S + S +SS ++
Sbjct: 128 LVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSKSSSSSSKSSSRSSSRTTS 178
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 25.4 bits (53), Expect = 9.3
Identities = 17/70 (24%), Positives = 35/70 (50%)
Frame = +1
Query: 223 EEEFQRKRAREKANIRQQLRLVSSGAASMPTTTPHSKARDEPDGSCRDSPAAERSRDSRQ 402
E ++ K +RQ+++ VSS +P+T P K + + ++S AA+ ++
Sbjct: 427 ENHYELKTYDRAERLRQKIQEVSSNKRLIPSTPPTKKPINAVLDAAKNS-AAKDLHLAKM 485
Query: 403 RHSNASSEIS 432
+ +N + E S
Sbjct: 486 KLNNKNDESS 495
>SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 327
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 133 ERKXLAEKLSKEADLKEQQRRTELEAMRRVEEEFQRKRARE 255
ERK AEK ++ + K+++ + ++A EE +KR R+
Sbjct: 288 ERKKRAEKKEQQKEKKKEKEKERMKAFIPPEES-SKKRKRD 327
>SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 461
Score = 25.4 bits (53), Expect = 9.3
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3
Query: 466 RNGWEWYSCSWR*FPRKHCCVSGASPGTSP 377
+ WEW+S S+ F + SG SP
Sbjct: 391 QKAWEWWSASYSLFTSSNATYSGEQKTYSP 420
>SPCC285.08 |ret2||coatomer delta subunit Ret2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 240
Score = 25.4 bits (53), Expect = 9.3
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +1
Query: 130 LERKXLAEKLSKEADLKEQQRRTELEAMRRVEE-EFQRKRAREKA--NIRQQLRLVSSGA 300
LE + EK+ + ++ TE E RR+++ E Q+K A +A N+ S G
Sbjct: 134 LEMESHEEKIQEIVSRNKEIEATE-ERKRRIKQLELQKKEAARRAAQNLPSADAYESIGY 192
Query: 301 ASMPTTTPHSKARDE 345
++ TT S DE
Sbjct: 193 QTVNTTFATSNVEDE 207
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,607,365
Number of Sequences: 5004
Number of extensions: 46733
Number of successful extensions: 196
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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